EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000027176 (Gene tree)
Gene ID: 100735710
Gene Symbol: PRDM14
Alias: -
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 13365 bases
Position: chrDS562855.1:42555306-42568670
Accession: 100735710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000015743	zf-C2H2	PF00096.26	1.9e-19	1	3
ENSCPOP00000015743	zf-C2H2	PF00096.26	1.9e-19	2	3
ENSCPOP00000015743	zf-C2H2	PF00096.26	1.9e-19	3	3
ENSCPOP00000015743	zf-met	PF12874.7	6.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000020649	PRDM14-201	1545	XM_003479934	ENSCPOP00000015743	515 (aa)	XP_003479982	H0VYG1

Gene Model

Click here to download ENSCPOG00000027176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000027176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000027176	PRDM14	53	32.667	ENSCPOG00000010143	GTF3A	81	32.895
ENSCPOG00000027176	PRDM14	76	34.884	ENSCPOG00000005901	PRDM12	93	34.884
ENSCPOG00000027176	PRDM14	65	34.911	ENSCPOG00000036704	-	77	34.911
ENSCPOG00000027176	PRDM14	57	35.652	ENSCPOG00000012883	PRDM5	98	34.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000027176	PRDM14	78	55.392	ENSACIG00000022698	prdm14	66	55.392	Amphilophus_citrinellus
ENSCPOG00000027176	PRDM14	72	55.833	ENSACLG00000025407	prdm14	61	57.825	Astatotilapia_calliptera
ENSCPOG00000027176	PRDM14	73	61.436	ENSAMXG00000000512	prdm14	79	61.436	Astyanax_mexicanus
ENSCPOG00000027176	PRDM14	100	62.413	ENSBTAG00000000060	PRDM14	100	62.413	Bos_taurus
ENSCPOG00000027176	PRDM14	100	61.257	ENSCHIG00000009297	PRDM14	100	61.257	Capra_hircus
ENSCPOG00000027176	PRDM14	73	81.698	ENSTSYG00000010610	PRDM14	92	81.698	Carlito_syrichta
ENSCPOG00000027176	PRDM14	100	57.266	ENSCCAG00000026032	PRDM14	100	59.272	Cebus_capucinus
ENSCPOG00000027176	PRDM14	100	70.157	ENSCLAG00000001937	PRDM14	99	70.157	Chinchilla_lanigera
ENSCPOG00000027176	PRDM14	73	58.047	ENSGACG00000002829	prdm14	74	58.047	Gasterosteus_aculeatus
ENSCPOG00000027176	PRDM14	78	62.255	ENSHBUG00000019660	prdm14	62	64.987	Haplochromis_burtoni
ENSCPOG00000027176	PRDM14	73	64.987	ENSMZEG00005021597	prdm14	62	64.987	Maylandia_zebra
ENSCPOG00000027176	PRDM14	73	65.252	ENSNBRG00000023669	prdm14	62	65.252	Neolamprologus_brichardi
ENSCPOG00000027176	PRDM14	100	71.708	ENSODEG00000003245	PRDM14	100	71.708	Octodon_degus
ENSCPOG00000027176	PRDM14	80	74.065	ENSOARG00000003528	PRDM14	87	74.065	Ovis_aries
ENSCPOG00000027176	PRDM14	73	64.987	ENSPNYG00000001938	prdm14	62	64.987	Pundamilia_nyererei
ENSCPOG00000027176	PRDM14	73	64.987	ENSSDUG00000013311	prdm14	62	64.987	Seriola_dumerili
ENSCPOG00000027176	PRDM14	73	64.987	ENSSLDG00000006506	prdm14	63	64.987	Seriola_lalandi_dorsalis
ENSCPOG00000027176	PRDM14	73	64.644	ENSTNIG00000008194	prdm14	100	64.644	Tetraodon_nigroviridis