EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000030129 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1961 bases
Position: chrDS562861.1:38845398-38847358
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000027781	TruB_N	PF01509.18	1.3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000046163	-	774	-	ENSCPOP00000027781	257 (aa)	-	A0A286XR79

Gene Model

Click here to download ENSCPOG00000030129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000030129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000030129	-	85	86.066	ENSCPOG00000040236	-	100	87.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000030129	-	86	79.032	ENSG00000165832	TRUB1	71	79.032	Homo_sapiens
ENSCPOG00000030129	-	75	63.212	ENSAPOG00000020565	trub1	71	62.887	Acanthochromis_polyacanthus
ENSCPOG00000030129	-	76	92.821	ENSAMEG00000014931	TRUB1	70	79.839	Ailuropoda_melanoleuca
ENSCPOG00000030129	-	72	58.065	ENSACIG00000003060	trub1	62	58.065	Amphilophus_citrinellus
ENSCPOG00000030129	-	72	65.405	ENSAOCG00000017188	trub1	68	65.054	Amphiprion_ocellaris
ENSCPOG00000030129	-	75	63.590	ENSAPEG00000015209	trub1	71	63.590	Amphiprion_percula
ENSCPOG00000030129	-	72	67.027	ENSATEG00000023291	trub1	66	67.027	Anabas_testudineus
ENSCPOG00000030129	-	74	73.684	ENSAPLG00000006808	TRUB1	68	73.684	Anas_platyrhynchos
ENSCPOG00000030129	-	73	68.085	ENSACAG00000009282	TRUB1	68	68.085	Anolis_carolinensis
ENSCPOG00000030129	-	76	93.846	ENSANAG00000022870	TRUB1	71	80.321	Aotus_nancymaae
ENSCPOG00000030129	-	72	63.978	ENSACLG00000000823	trub1	67	63.978	Astatotilapia_calliptera
ENSCPOG00000030129	-	72	65.591	ENSAMXG00000015845	trub1	62	65.591	Astyanax_mexicanus
ENSCPOG00000030129	-	84	79.253	ENSBTAG00000012955	TRUB1	71	79.600	Bos_taurus
ENSCPOG00000030129	-	86	79.116	ENSCJAG00000047815	TRUB1	71	80.723	Callithrix_jacchus
ENSCPOG00000030129	-	76	93.333	ENSCAFG00000011688	TRUB1	71	79.435	Canis_familiaris
ENSCPOG00000030129	-	76	93.333	ENSCAFG00020013237	TRUB1	71	79.839	Canis_lupus_dingo
ENSCPOG00000030129	-	76	92.821	ENSCHIG00000020884	TRUB1	58	92.821	Capra_hircus
ENSCPOG00000030129	-	76	91.795	ENSTSYG00000000446	TRUB1	71	78.313	Carlito_syrichta
ENSCPOG00000030129	-	65	89.286	ENSCAPG00000017088	TRUB1	71	89.286	Cavia_aperea
ENSCPOG00000030129	-	76	93.333	ENSCCAG00000028842	TRUB1	71	79.116	Cebus_capucinus
ENSCPOG00000030129	-	86	79.032	ENSCATG00000033431	TRUB1	71	79.435	Cercocebus_atys
ENSCPOG00000030129	-	85	81.148	ENSCLAG00000008664	TRUB1	100	83.197	Chinchilla_lanigera
ENSCPOG00000030129	-	86	79.032	ENSCSAG00000004891	TRUB1	71	79.435	Chlorocebus_sabaeus
ENSCPOG00000030129	-	86	70.161	ENSCHOG00000011931	TRUB1	73	69.758	Choloepus_hoffmanni
ENSCPOG00000030129	-	73	77.005	ENSCPBG00000003051	TRUB1	64	77.005	Chrysemys_picta_bellii
ENSCPOG00000030129	-	86	79.032	ENSCANG00000029445	TRUB1	71	79.435	Colobus_angolensis_palliatus
ENSCPOG00000030129	-	60	88.235	ENSCGRG00001016772	-	66	70.354	Cricetulus_griseus_chok1gshd
ENSCPOG00000030129	-	70	76.536	ENSCGRG00001010322	-	58	70.721	Cricetulus_griseus_chok1gshd
ENSCPOG00000030129	-	70	89.944	ENSCGRG00000010806	Trub1	69	81.858	Cricetulus_griseus_crigri
ENSCPOG00000030129	-	72	63.978	ENSCSEG00000011261	trub1	60	63.978	Cynoglossus_semilaevis
ENSCPOG00000030129	-	76	63.776	ENSCVAG00000008791	trub1	60	63.776	Cyprinodon_variegatus
ENSCPOG00000030129	-	77	64.646	ENSDARG00000053805	trub1	76	69.608	Danio_rerio
ENSCPOG00000030129	-	75	88.144	ENSDNOG00000001069	TRUB1	71	75.904	Dasypus_novemcinctus
ENSCPOG00000030129	-	70	93.855	ENSDORG00000010431	Trub1	56	92.308	Dipodomys_ordii
ENSCPOG00000030129	-	55	85.915	ENSETEG00000009183	TRUB1	57	67.157	Echinops_telfairi
ENSCPOG00000030129	-	76	92.821	ENSEASG00005014739	TRUB1	71	80.645	Equus_asinus_asinus
ENSCPOG00000030129	-	76	92.821	ENSECAG00000007177	TRUB1	71	80.645	Equus_caballus
ENSCPOG00000030129	-	85	64.286	ENSEEUG00000013993	TRUB1	70	65.873	Erinaceus_europaeus
ENSCPOG00000030129	-	72	68.280	ENSELUG00000000502	trub1	65	68.280	Esox_lucius
ENSCPOG00000030129	-	76	91.795	ENSFCAG00000031927	TRUB1	71	79.352	Felis_catus
ENSCPOG00000030129	-	61	74.522	ENSFALG00000002232	TRUB1	60	74.522	Ficedula_albicollis
ENSCPOG00000030129	-	85	79.098	ENSFDAG00000008140	TRUB1	100	79.918	Fukomys_damarensis
ENSCPOG00000030129	-	75	63.590	ENSFHEG00000004016	trub1	67	63.590	Fundulus_heteroclitus
ENSCPOG00000030129	-	79	67.822	ENSGALG00000009091	TRUB1	88	67.822	Gallus_gallus
ENSCPOG00000030129	-	72	63.102	ENSGAFG00000009193	trub1	66	63.102	Gambusia_affinis
ENSCPOG00000030129	-	53	65.185	ENSGACG00000015387	trub1	66	65.185	Gasterosteus_aculeatus
ENSCPOG00000030129	-	77	74.619	ENSGAGG00000009758	TRUB1	56	74.619	Gopherus_agassizii
ENSCPOG00000030129	-	86	79.032	ENSGGOG00000004583	TRUB1	71	79.032	Gorilla_gorilla
ENSCPOG00000030129	-	78	61.000	ENSHBUG00000016787	trub1	71	61.000	Haplochromis_burtoni
ENSCPOG00000030129	-	86	78.947	ENSHGLG00000015314	TRUB1	71	80.567	Heterocephalus_glaber_female
ENSCPOG00000030129	-	85	81.435	ENSHGLG00100009183	TRUB1	100	83.122	Heterocephalus_glaber_male
ENSCPOG00000030129	-	75	63.077	ENSHCOG00000017877	trub1	71	63.077	Hippocampus_comes
ENSCPOG00000030129	-	76	66.837	ENSIPUG00000017559	trub1	69	66.837	Ictalurus_punctatus
ENSCPOG00000030129	-	76	93.333	ENSSTOG00000003641	TRUB1	70	85.776	Ictidomys_tridecemlineatus
ENSCPOG00000030129	-	76	92.821	ENSJJAG00000011800	Trub1	70	82.353	Jaculus_jaculus
ENSCPOG00000030129	-	75	63.590	ENSKMAG00000006232	trub1	70	63.590	Kryptolebias_marmoratus
ENSCPOG00000030129	-	75	64.103	ENSLBEG00000026722	trub1	68	64.103	Labrus_bergylta
ENSCPOG00000030129	-	76	72.081	ENSLACG00000014885	TRUB1	65	72.081	Latimeria_chalumnae
ENSCPOG00000030129	-	77	68.020	ENSLOCG00000012979	trub1	67	68.020	Lepisosteus_oculatus
ENSCPOG00000030129	-	86	75.934	ENSLAFG00000015452	TRUB1	69	75.934	Loxodonta_africana
ENSCPOG00000030129	-	86	79.032	ENSMFAG00000031767	TRUB1	71	79.435	Macaca_fascicularis
ENSCPOG00000030129	-	86	79.032	ENSMMUG00000001902	TRUB1	71	79.435	Macaca_mulatta
ENSCPOG00000030129	-	86	73.387	ENSMNEG00000044646	TRUB1	70	73.790	Macaca_nemestrina
ENSCPOG00000030129	-	86	79.032	ENSMLEG00000042655	TRUB1	71	79.435	Mandrillus_leucophaeus
ENSCPOG00000030129	-	72	63.978	ENSMZEG00005024095	trub1	67	63.978	Maylandia_zebra
ENSCPOG00000030129	-	73	72.727	ENSMGAG00000011135	TRUB1	64	72.727	Meleagris_gallopavo
ENSCPOG00000030129	-	70	86.592	ENSMAUG00000011101	Trub1	57	85.641	Mesocricetus_auratus
ENSCPOG00000030129	-	86	78.947	ENSMICG00000016324	TRUB1	71	80.567	Microcebus_murinus
ENSCPOG00000030129	-	86	79.039	ENSMOCG00000017759	Trub1	69	79.476	Microtus_ochrogaster
ENSCPOG00000030129	-	72	86.486	ENSMODG00000009676	TRUB1	55	81.500	Monodelphis_domestica
ENSCPOG00000030129	-	90	74.494	MGP_CAROLIEiJ_G0023100	Trub1	98	78.543	Mus_caroli
ENSCPOG00000030129	-	90	73.279	ENSMUSG00000025086	Trub1	98	77.733	Mus_musculus
ENSCPOG00000030129	-	86	79.747	MGP_PahariEiJ_G0014588	Trub1	70	81.013	Mus_pahari
ENSCPOG00000030129	-	90	73.279	MGP_SPRETEiJ_G0024021	Trub1	98	77.733	Mus_spretus
ENSCPOG00000030129	-	76	93.846	ENSMPUG00000003556	TRUB1	71	80.645	Mustela_putorius_furo
ENSCPOG00000030129	-	76	92.821	ENSMLUG00000017686	TRUB1	70	83.193	Myotis_lucifugus
ENSCPOG00000030129	-	76	91.795	ENSNGAG00000018682	Trub1	67	81.197	Nannospalax_galili
ENSCPOG00000030129	-	72	63.978	ENSNBRG00000023393	trub1	66	63.978	Neolamprologus_brichardi
ENSCPOG00000030129	-	82	79.574	ENSNLEG00000016345	TRUB1	71	79.032	Nomascus_leucogenys
ENSCPOG00000030129	-	72	86.486	ENSMEUG00000006603	TRUB1	81	77.169	Notamacropus_eugenii
ENSCPOG00000030129	-	76	85.641	ENSOPRG00000009371	TRUB1	56	86.528	Ochotona_princeps
ENSCPOG00000030129	-	86	78.543	ENSODEG00000010854	TRUB1	71	79.352	Octodon_degus
ENSCPOG00000030129	-	78	60.199	ENSONIG00000007249	trub1	72	60.199	Oreochromis_niloticus
ENSCPOG00000030129	-	73	80.214	ENSOANG00000001556	TRUB1	67	76.733	Ornithorhynchus_anatinus
ENSCPOG00000030129	-	76	88.718	ENSOCUG00000009456	TRUB1	56	88.718	Oryctolagus_cuniculus
ENSCPOG00000030129	-	72	66.486	ENSORLG00000029719	trub1	66	66.486	Oryzias_latipes
ENSCPOG00000030129	-	72	65.946	ENSORLG00020016767	trub1	73	60.680	Oryzias_latipes_hni
ENSCPOG00000030129	-	72	65.946	ENSORLG00015014728	trub1	66	65.946	Oryzias_latipes_hsok
ENSCPOG00000030129	-	72	68.108	ENSOMEG00000014556	trub1	65	68.108	Oryzias_melastigma
ENSCPOG00000030129	-	86	79.032	ENSOGAG00000015895	TRUB1	71	80.645	Otolemur_garnettii
ENSCPOG00000030129	-	75	90.404	ENSOARG00000015591	TRUB1	70	79.116	Ovis_aries
ENSCPOG00000030129	-	86	79.435	ENSPPAG00000043645	TRUB1	71	79.435	Pan_paniscus
ENSCPOG00000030129	-	76	91.795	ENSPPRG00000007096	TRUB1	71	79.352	Panthera_pardus
ENSCPOG00000030129	-	76	92.308	ENSPTIG00000006378	TRUB1	71	79.757	Panthera_tigris_altaica
ENSCPOG00000030129	-	86	79.435	ENSPTRG00000002964	TRUB1	71	79.435	Pan_troglodytes
ENSCPOG00000030129	-	86	78.629	ENSPANG00000020712	TRUB1	71	79.032	Papio_anubis
ENSCPOG00000030129	-	73	75.401	ENSPSIG00000012877	TRUB1	64	75.401	Pelodiscus_sinensis
ENSCPOG00000030129	-	72	62.903	ENSPMGG00000000075	trub1	67	62.903	Periophthalmus_magnuspinnatus
ENSCPOG00000030129	-	76	86.154	ENSPEMG00000011156	Trub1	70	75.519	Peromyscus_maniculatus_bairdii
ENSCPOG00000030129	-	72	86.486	ENSPCIG00000009729	TRUB1	70	70.782	Phascolarctos_cinereus
ENSCPOG00000030129	-	72	64.516	ENSPFOG00000009950	trub1	68	64.516	Poecilia_formosa
ENSCPOG00000030129	-	72	64.516	ENSPLAG00000013855	trub1	65	64.516	Poecilia_latipinna
ENSCPOG00000030129	-	72	64.516	ENSPMEG00000009064	trub1	67	64.516	Poecilia_mexicana
ENSCPOG00000030129	-	74	64.062	ENSPREG00000003343	trub1	69	64.062	Poecilia_reticulata
ENSCPOG00000030129	-	82	80.000	ENSPPYG00000002676	TRUB1	71	80.645	Pongo_abelii
ENSCPOG00000030129	-	85	72.177	ENSPCAG00000008427	TRUB1	70	72.581	Procavia_capensis
ENSCPOG00000030129	-	86	72.065	ENSPCOG00000024360	TRUB1	69	73.684	Propithecus_coquereli
ENSCPOG00000030129	-	86	78.543	ENSPVAG00000007575	TRUB1	94	80.162	Pteropus_vampyrus
ENSCPOG00000030129	-	77	61.307	ENSPNYG00000018614	trub1	71	61.307	Pundamilia_nyererei
ENSCPOG00000030129	-	77	54.040	ENSPNAG00000006881	trub1	61	54.040	Pygocentrus_nattereri
ENSCPOG00000030129	-	86	77.083	ENSRNOG00000017321	Trub1	70	78.333	Rattus_norvegicus
ENSCPOG00000030129	-	82	68.776	ENSRBIG00000033423	TRUB1	67	69.198	Rhinopithecus_bieti
ENSCPOG00000030129	-	86	79.435	ENSRROG00000033902	TRUB1	71	79.839	Rhinopithecus_roxellana
ENSCPOG00000030129	-	82	80.851	ENSSBOG00000024237	TRUB1	71	80.321	Saimiri_boliviensis_boliviensis
ENSCPOG00000030129	-	60	84.967	ENSSHAG00000009346	TRUB1	51	84.967	Sarcophilus_harrisii
ENSCPOG00000030129	-	72	66.129	ENSSFOG00015022124	trub1	63	66.129	Scleropages_formosus
ENSCPOG00000030129	-	74	64.767	ENSSMAG00000001020	trub1	69	64.767	Scophthalmus_maximus
ENSCPOG00000030129	-	70	66.667	ENSSDUG00000016414	trub1	69	65.285	Seriola_dumerili
ENSCPOG00000030129	-	70	67.222	ENSSLDG00000015486	trub1	69	65.803	Seriola_lalandi_dorsalis
ENSCPOG00000030129	-	73	78.610	ENSSPUG00000001642	TRUB1	64	78.610	Sphenodon_punctatus
ENSCPOG00000030129	-	72	65.591	ENSSPAG00000001217	trub1	67	65.591	Stegastes_partitus
ENSCPOG00000030129	-	86	75.403	ENSSSCG00000010653	TRUB1	72	76.613	Sus_scrofa
ENSCPOG00000030129	-	72	75.135	ENSTGUG00000010971	TRUB1	68	73.333	Taeniopygia_guttata
ENSCPOG00000030129	-	76	92.308	ENSTTRG00000005767	TRUB1	94	79.675	Tursiops_truncatus
ENSCPOG00000030129	-	76	93.846	ENSUAMG00000024876	TRUB1	71	81.048	Ursus_americanus
ENSCPOG00000030129	-	75	94.301	ENSUMAG00000002411	TRUB1	99	78.740	Ursus_maritimus
ENSCPOG00000030129	-	86	77.419	ENSVPAG00000005507	TRUB1	71	78.629	Vicugna_pacos
ENSCPOG00000030129	-	76	93.333	ENSVVUG00000010085	TRUB1	59	80.408	Vulpes_vulpes
ENSCPOG00000030129	-	73	68.984	ENSXETG00000023828	trub1	67	68.984	Xenopus_tropicalis
ENSCPOG00000030129	-	72	63.978	ENSXCOG00000017847	trub1	66	63.978	Xiphophorus_couchianus
ENSCPOG00000030129	-	72	63.978	ENSXMAG00000014701	trub1	67	63.978	Xiphophorus_maculatus