EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000030311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein SCAF8 pseudogene
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 3791 bases
Position: chrDS562923.1:7486882-7490672
Accession: 100719115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000025183	RRM_1	PF00076.22	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000044465	-	3519	XM_013148011	ENSCPOP00000025183	1172 (aa)	-	A0A286XI83

Gene Model

Click here to download ENSCPOG00000030311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000030311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000030311	-	99	82.764	ENSCPOG00000022216	-	99	84.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000030311	-	59	43.169	ENSAPOG00000015527	SCAF8	77	51.505	Acanthochromis_polyacanthus
ENSCPOG00000030311	-	59	42.779	ENSAOCG00000002421	SCAF8	76	50.835	Amphiprion_ocellaris
ENSCPOG00000030311	-	90	48.387	ENSAPEG00000020115	SCAF8	78	48.843	Amphiprion_percula
ENSCPOG00000030311	-	56	52.419	ENSATEG00000006959	SCAF8	97	56.574	Anabas_testudineus
ENSCPOG00000030311	-	66	65.655	ENSAPLG00000005765	SCAF8	100	68.794	Anas_platyrhynchos
ENSCPOG00000030311	-	66	60.996	ENSACAG00000005282	SCAF8	99	64.397	Anolis_carolinensis
ENSCPOG00000030311	-	59	41.860	ENSACLG00000018828	SCAF8	80	50.712	Astatotilapia_calliptera
ENSCPOG00000030311	-	52	42.615	ENSACLG00000024833	scaf4b	81	42.047	Astatotilapia_calliptera
ENSCPOG00000030311	-	80	90.588	ENSCAPG00000003300	SCAF8	99	74.895	Cavia_aperea
ENSCPOG00000030311	-	66	60.465	ENSCPBG00000016330	SCAF8	100	60.712	Chrysemys_picta_bellii
ENSCPOG00000030311	-	59	43.879	ENSCSEG00000000043	-	78	51.176	Cynoglossus_semilaevis
ENSCPOG00000030311	-	54	53.693	ENSCVAG00000000925	SCAF8	77	57.424	Cyprinodon_variegatus
ENSCPOG00000030311	-	54	54.420	ENSELUG00000002779	SCAF8	93	61.876	Esox_lucius
ENSCPOG00000030311	-	66	64.578	ENSFALG00000012433	SCAF8	100	68.242	Ficedula_albicollis
ENSCPOG00000030311	-	59	54.624	ENSFHEG00000008284	SCAF8	77	59.752	Fundulus_heteroclitus
ENSCPOG00000030311	-	66	66.106	ENSGALG00000013635	SCAF8	98	69.189	Gallus_gallus
ENSCPOG00000030311	-	54	54.986	ENSGAFG00000018033	SCAF8	78	59.483	Gambusia_affinis
ENSCPOG00000030311	-	59	40.866	ENSGACG00000006909	SCAF8	100	49.372	Gasterosteus_aculeatus
ENSCPOG00000030311	-	65	66.010	ENSGAGG00000017820	-	88	65.686	Gopherus_agassizii
ENSCPOG00000030311	-	90	61.502	ENSHBUG00000019537	SCAF8	80	50.629	Haplochromis_burtoni
ENSCPOG00000030311	-	54	53.514	ENSKMAG00000012767	SCAF8	78	51.939	Kryptolebias_marmoratus
ENSCPOG00000030311	-	73	63.704	ENSLBEG00000012484	-	66	69.534	Labrus_bergylta
ENSCPOG00000030311	-	59	51.690	ENSLACG00000001394	SCAF8	99	57.801	Latimeria_chalumnae
ENSCPOG00000030311	-	66	48.496	ENSLOCG00000016856	SCAF8	100	53.931	Lepisosteus_oculatus
ENSCPOG00000030311	-	66	79.634	ENSLAFG00000000022	SCAF8	100	80.549	Loxodonta_africana
ENSCPOG00000030311	-	55	53.243	ENSMAMG00000009457	SCAF8	76	50.356	Mastacembelus_armatus
ENSCPOG00000030311	-	59	41.724	ENSMZEG00005005698	SCAF8	80	50.629	Maylandia_zebra
ENSCPOG00000030311	-	66	64.650	ENSMGAG00000012762	SCAF8	100	68.789	Meleagris_gallopavo
ENSCPOG00000030311	-	59	43.394	ENSMMOG00000002216	SCAF8	78	50.000	Mola_mola
ENSCPOG00000030311	-	59	43.052	ENSMALG00000011584	SCAF8	78	50.874	Monopterus_albus
ENSCPOG00000030311	-	100	77.987	MGP_CAROLIEiJ_G0021016	Scaf8	100	78.993	Mus_caroli
ENSCPOG00000030311	-	100	78.066	ENSMUSG00000046201	Scaf8	100	79.072	Mus_musculus
ENSCPOG00000030311	-	97	63.384	ENSNBRG00000009067	SCAF8	100	47.691	Neolamprologus_brichardi
ENSCPOG00000030311	-	73	82.275	ENSOPRG00000018413	-	77	85.849	Ochotona_princeps
ENSCPOG00000030311	-	66	40.836	ENSONIG00000008119	SCAF8	99	49.882	Oreochromis_niloticus
ENSCPOG00000030311	-	54	54.674	ENSORLG00000017358	SCAF8	78	60.099	Oryzias_latipes
ENSCPOG00000030311	-	53	40.752	ENSORLG00000003420	scaf4b	73	43.684	Oryzias_latipes
ENSCPOG00000030311	-	56	65.657	ENSORLG00020002214	SCAF8	78	49.832	Oryzias_latipes_hni
ENSCPOG00000030311	-	53	40.881	ENSORLG00020013853	scaf4b	73	42.808	Oryzias_latipes_hni
ENSCPOG00000030311	-	56	65.909	ENSORLG00015015779	SCAF8	78	59.483	Oryzias_latipes_hsok
ENSCPOG00000030311	-	99	82.082	ENSPTIG00000014836	SCAF8	100	82.609	Panthera_tigris_altaica
ENSCPOG00000030311	-	66	43.824	ENSPKIG00000021212	SCAF8	100	51.729	Paramormyrops_kingsleyae
ENSCPOG00000030311	-	66	63.948	ENSPSIG00000008614	SCAF8	93	64.240	Pelodiscus_sinensis
ENSCPOG00000030311	-	54	55.114	ENSPFOG00000004176	SCAF8	93	60.323	Poecilia_formosa
ENSCPOG00000030311	-	54	54.830	ENSPLAG00000021432	SCAF8	77	59.803	Poecilia_latipinna
ENSCPOG00000030311	-	54	55.114	ENSPMEG00000007591	SCAF8	84	59.226	Poecilia_mexicana
ENSCPOG00000030311	-	54	55.114	ENSPREG00000000652	SCAF8	77	59.679	Poecilia_reticulata
ENSCPOG00000030311	-	71	81.266	ENSPCAG00000013044	SCAF8	90	83.054	Procavia_capensis
ENSCPOG00000030311	-	59	41.860	ENSPNYG00000007277	SCAF8	80	50.712	Pundamilia_nyererei
ENSCPOG00000030311	-	55	55.978	ENSPNAG00000024740	SCAF8	82	60.000	Pygocentrus_nattereri
ENSCPOG00000030311	-	100	82.438	ENSRBIG00000035769	SCAF8	100	82.797	Rhinopithecus_bieti
ENSCPOG00000030311	-	66	74.601	ENSSHAG00000009915	SCAF8	100	75.235	Sarcophilus_harrisii
ENSCPOG00000030311	-	100	47.244	ENSSFOG00015009481	SCAF8	100	49.098	Scleropages_formosus
ENSCPOG00000030311	-	93	48.102	ENSSMAG00000008275	SCAF8	77	49.711	Scophthalmus_maximus
ENSCPOG00000030311	-	56	41.520	ENSSMAG00000017901	scaf4a	58	43.994	Scophthalmus_maximus
ENSCPOG00000030311	-	54	40.480	ENSSMAG00000003738	scaf4b	72	44.308	Scophthalmus_maximus
ENSCPOG00000030311	-	100	65.361	ENSSPUG00000015219	SCAF8	100	67.345	Sphenodon_punctatus
ENSCPOG00000030311	-	55	52.703	ENSSPAG00000019433	SCAF8	74	57.895	Stegastes_partitus
ENSCPOG00000030311	-	66	65.175	ENSTGUG00000011151	SCAF8	100	69.405	Taeniopygia_guttata
ENSCPOG00000030311	-	59	41.997	ENSTRUG00000009243	SCAF8	78	50.334	Takifugu_rubripes
ENSCPOG00000030311	-	59	41.644	ENSTNIG00000016885	SCAF8	99	49.118	Tetraodon_nigroviridis
ENSCPOG00000030311	-	99	52.553	ENSXETG00000013132	scaf8	99	54.460	Xenopus_tropicalis
ENSCPOG00000030311	-	54	54.545	ENSXMAG00000019192	SCAF8	78	59.556	Xiphophorus_maculatus