EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000030440 (Gene tree)
Gene ID: 100731564
Gene Symbol: -
Alias: -
Full Name: single-stranded DNA cytosine deaminase
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 6255 bases
Position: chrDS562883.1:2260356-2266610
Accession: 100731564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000029513	APOBEC_N	PF08210.11	5.1e-63	1	1
ENSCPOP00000029513	APOBEC_C	PF05240.14	4.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000031074	-	1227	XM_003470579	ENSCPOP00000029513	193 (aa)	XP_003470627	A0A286XVE7

Gene Model

Click here to download ENSCPOG00000030440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000030440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000030440	-	100	98.446	ENSCPOG00000039255	-	100	98.446
ENSCPOG00000030440	-	91	97.159	ENSCPOG00000037838	-	97	97.159
ENSCPOG00000030440	-	100	36.364	ENSCPOG00000009257	-	88	36.364
ENSCPOG00000030440	-	88	32.948	ENSCPOG00000036103	APOBEC2	75	36.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000030440	-	100	95.337	ENSG00000111732	AICDA	98	95.337	Homo_sapiens
ENSCPOG00000030440	-	98	59.162	ENSAPOG00000023552	aicda	99	59.162	Acanthochromis_polyacanthus
ENSCPOG00000030440	-	100	95.337	ENSAMEG00000007082	AICDA	97	95.337	Ailuropoda_melanoleuca
ENSCPOG00000030440	-	100	61.026	ENSACIG00000012301	aicda	99	61.026	Amphilophus_citrinellus
ENSCPOG00000030440	-	100	58.763	ENSAOCG00000000482	aicda	99	57.073	Amphiprion_ocellaris
ENSCPOG00000030440	-	100	58.763	ENSAPEG00000009755	aicda	97	58.763	Amphiprion_percula
ENSCPOG00000030440	-	100	61.026	ENSATEG00000022035	aicda	95	61.026	Anabas_testudineus
ENSCPOG00000030440	-	100	89.637	ENSAPLG00000013954	AICDA	96	89.637	Anas_platyrhynchos
ENSCPOG00000030440	-	100	86.010	ENSACAG00000017441	AICDA	97	86.010	Anolis_carolinensis
ENSCPOG00000030440	-	100	94.819	ENSANAG00000022438	AICDA	97	94.819	Aotus_nancymaae
ENSCPOG00000030440	-	100	61.538	ENSACLG00000022679	aicda	99	61.538	Astatotilapia_calliptera
ENSCPOG00000030440	-	71	58.108	ENSAMXG00000037242	aicda	61	58.108	Astyanax_mexicanus
ENSCPOG00000030440	-	100	93.814	ENSBTAG00000018849	AICDA	97	93.814	Bos_taurus
ENSCPOG00000030440	-	100	94.819	ENSCJAG00000018856	AICDA	97	94.819	Callithrix_jacchus
ENSCPOG00000030440	-	100	94.819	ENSCAFG00000013897	AICDA	83	94.819	Canis_familiaris
ENSCPOG00000030440	-	100	94.819	ENSCAFG00020003515	AICDA	95	94.819	Canis_lupus_dingo
ENSCPOG00000030440	-	100	91.237	ENSCHIG00000012409	AICDA	97	91.237	Capra_hircus
ENSCPOG00000030440	-	100	92.228	ENSTSYG00000011304	AICDA	97	92.228	Carlito_syrichta
ENSCPOG00000030440	-	100	75.648	ENSCCAG00000030398	AICDA	97	75.648	Cebus_capucinus
ENSCPOG00000030440	-	100	95.337	ENSCATG00000039986	AICDA	97	95.337	Cercocebus_atys
ENSCPOG00000030440	-	100	95.337	ENSCSAG00000009663	AICDA	98	95.337	Chlorocebus_sabaeus
ENSCPOG00000030440	-	100	72.165	ENSCHOG00000010248	AICDA	97	72.165	Choloepus_hoffmanni
ENSCPOG00000030440	-	100	89.119	ENSCPBG00000014337	AICDA	97	89.119	Chrysemys_picta_bellii
ENSCPOG00000030440	-	100	95.337	ENSCANG00000035131	AICDA	97	95.337	Colobus_angolensis_palliatus
ENSCPOG00000030440	-	100	93.782	ENSCGRG00001009654	Aicda	97	93.782	Cricetulus_griseus_chok1gshd
ENSCPOG00000030440	-	100	93.782	ENSCGRG00000013829	Aicda	97	93.782	Cricetulus_griseus_crigri
ENSCPOG00000030440	-	100	58.049	ENSCSEG00000018589	aicda	96	58.049	Cynoglossus_semilaevis
ENSCPOG00000030440	-	100	60.309	ENSCVAG00000001218	aicda	96	60.309	Cyprinodon_variegatus
ENSCPOG00000030440	-	100	61.881	ENSDARG00000015734	aicda	96	61.881	Danio_rerio
ENSCPOG00000030440	-	91	90.341	ENSETEG00000014702	AICDA	98	90.341	Echinops_telfairi
ENSCPOG00000030440	-	100	93.782	ENSEASG00005015947	AICDA	97	93.782	Equus_asinus_asinus
ENSCPOG00000030440	-	100	94.301	ENSECAG00000018578	AICDA	97	94.301	Equus_caballus
ENSCPOG00000030440	-	91	91.477	ENSEEUG00000013899	AICDA	98	91.477	Erinaceus_europaeus
ENSCPOG00000030440	-	100	56.585	ENSELUG00000016293	aicda	96	56.585	Esox_lucius
ENSCPOG00000030440	-	100	95.337	ENSFCAG00000006052	AICDA	83	95.337	Felis_catus
ENSCPOG00000030440	-	100	82.383	ENSFALG00000007261	AICDA	98	82.383	Ficedula_albicollis
ENSCPOG00000030440	-	91	84.659	ENSFDAG00000011141	AICDA	97	84.659	Fukomys_damarensis
ENSCPOG00000030440	-	100	57.561	ENSFHEG00000015733	aicda	99	57.561	Fundulus_heteroclitus
ENSCPOG00000030440	-	100	58.738	ENSGMOG00000004114	aicda	95	58.738	Gadus_morhua
ENSCPOG00000030440	-	100	89.119	ENSGALG00000014280	AICDA	97	89.119	Gallus_gallus
ENSCPOG00000030440	-	100	55.610	ENSGAFG00000013758	aicda	94	55.610	Gambusia_affinis
ENSCPOG00000030440	-	100	56.098	ENSGACG00000010521	aicda	96	56.098	Gasterosteus_aculeatus
ENSCPOG00000030440	-	100	89.119	ENSGAGG00000011839	-	97	89.119	Gopherus_agassizii
ENSCPOG00000030440	-	100	89.119	ENSGAGG00000011838	-	97	89.119	Gopherus_agassizii
ENSCPOG00000030440	-	100	95.337	ENSGGOG00000003338	AICDA	97	95.337	Gorilla_gorilla
ENSCPOG00000030440	-	100	61.538	ENSHBUG00000014333	aicda	99	61.538	Haplochromis_burtoni
ENSCPOG00000030440	-	100	95.337	ENSHGLG00000001443	AICDA	97	95.337	Heterocephalus_glaber_female
ENSCPOG00000030440	-	100	94.819	ENSHGLG00100001381	AICDA	97	94.819	Heterocephalus_glaber_male
ENSCPOG00000030440	-	98	59.896	ENSHCOG00000018886	aicda	97	59.896	Hippocampus_comes
ENSCPOG00000030440	-	100	57.843	ENSIPUG00000007380	aicda	96	57.843	Ictalurus_punctatus
ENSCPOG00000030440	-	100	94.301	ENSSTOG00000010972	AICDA	97	94.301	Ictidomys_tridecemlineatus
ENSCPOG00000030440	-	91	96.023	ENSJJAG00000000908	Aicda	97	96.023	Jaculus_jaculus
ENSCPOG00000030440	-	100	59.794	ENSKMAG00000006359	aicda	97	59.794	Kryptolebias_marmoratus
ENSCPOG00000030440	-	100	56.650	ENSLBEG00000015351	aicda	98	57.561	Labrus_bergylta
ENSCPOG00000030440	-	70	71.111	ENSLACG00000009320	aicda	91	71.111	Latimeria_chalumnae
ENSCPOG00000030440	-	65	65.079	ENSLOCG00000008158	aicda	98	65.079	Lepisosteus_oculatus
ENSCPOG00000030440	-	99	92.188	ENSLAFG00000000721	AICDA	98	92.188	Loxodonta_africana
ENSCPOG00000030440	-	100	95.337	ENSMFAG00000037834	AICDA	97	95.337	Macaca_fascicularis
ENSCPOG00000030440	-	100	95.337	ENSMMUG00000019134	AICDA	97	95.337	Macaca_mulatta
ENSCPOG00000030440	-	100	95.337	ENSMNEG00000043421	AICDA	97	95.337	Macaca_nemestrina
ENSCPOG00000030440	-	76	95.918	ENSMLEG00000039759	-	99	86.391	Mandrillus_leucophaeus
ENSCPOG00000030440	-	100	95.337	ENSMLEG00000040938	AICDA	97	95.337	Mandrillus_leucophaeus
ENSCPOG00000030440	-	100	58.049	ENSMAMG00000020032	aicda	96	58.049	Mastacembelus_armatus
ENSCPOG00000030440	-	100	61.538	ENSMZEG00005016678	aicda	99	61.538	Maylandia_zebra
ENSCPOG00000030440	-	100	89.119	ENSMGAG00000013942	AICDA	98	89.119	Meleagris_gallopavo
ENSCPOG00000030440	-	100	93.782	ENSMAUG00000012229	Aicda	97	93.782	Mesocricetus_auratus
ENSCPOG00000030440	-	100	94.845	ENSMICG00000011695	AICDA	97	94.845	Microcebus_murinus
ENSCPOG00000030440	-	100	92.746	ENSMOCG00000022460	Aicda	97	92.746	Microtus_ochrogaster
ENSCPOG00000030440	-	100	57.561	ENSMMOG00000016707	aicda	96	57.561	Mola_mola
ENSCPOG00000030440	-	100	89.637	ENSMODG00000018002	AICDA	100	89.637	Monodelphis_domestica
ENSCPOG00000030440	-	100	57.073	ENSMALG00000010442	aicda	96	57.073	Monopterus_albus
ENSCPOG00000030440	-	71	94.161	MGP_CAROLIEiJ_G0028824	-	96	94.161	Mus_caroli
ENSCPOG00000030440	-	100	93.264	ENSMUSG00000040627	Aicda	100	91.667	Mus_musculus
ENSCPOG00000030440	-	100	94.301	MGP_PahariEiJ_G0022579	Aicda	100	95.000	Mus_pahari
ENSCPOG00000030440	-	100	93.264	MGP_SPRETEiJ_G0029856	Aicda	100	91.667	Mus_spretus
ENSCPOG00000030440	-	100	95.337	ENSMPUG00000017533	AICDA	92	95.337	Mustela_putorius_furo
ENSCPOG00000030440	-	100	94.301	ENSMLUG00000007881	AICDA	97	94.301	Myotis_lucifugus
ENSCPOG00000030440	-	100	95.337	ENSNGAG00000023430	Aicda	97	95.337	Nannospalax_galili
ENSCPOG00000030440	-	97	61.579	ENSNBRG00000000070	aicda	96	61.579	Neolamprologus_brichardi
ENSCPOG00000030440	-	100	94.819	ENSNLEG00000001917	AICDA	97	94.819	Nomascus_leucogenys
ENSCPOG00000030440	-	100	88.601	ENSMEUG00000006570	AICDA	97	88.601	Notamacropus_eugenii
ENSCPOG00000030440	-	100	90.155	ENSOPRG00000013486	AICDA	99	90.155	Ochotona_princeps
ENSCPOG00000030440	-	100	93.264	ENSODEG00000001235	AICDA	97	93.264	Octodon_degus
ENSCPOG00000030440	-	100	57.073	ENSONIG00000012823	aicda	96	57.073	Oreochromis_niloticus
ENSCPOG00000030440	-	100	92.746	ENSOANG00000007150	AICDA	97	92.746	Ornithorhynchus_anatinus
ENSCPOG00000030440	-	100	92.228	ENSOCUG00000023739	AICDA	100	92.228	Oryctolagus_cuniculus
ENSCPOG00000030440	-	100	59.487	ENSORLG00000011705	aicda	97	59.487	Oryzias_latipes
ENSCPOG00000030440	-	100	59.487	ENSORLG00020006547	aicda	97	59.487	Oryzias_latipes_hni
ENSCPOG00000030440	-	100	59.487	ENSORLG00015012504	aicda	97	59.487	Oryzias_latipes_hsok
ENSCPOG00000030440	-	100	59.487	ENSOMEG00000011880	aicda	95	59.487	Oryzias_melastigma
ENSCPOG00000030440	-	100	95.855	ENSOGAG00000026770	AICDA	97	95.855	Otolemur_garnettii
ENSCPOG00000030440	-	100	90.306	ENSOARG00000001982	AICDA	98	90.306	Ovis_aries
ENSCPOG00000030440	-	100	95.337	ENSPPAG00000038169	AICDA	97	95.337	Pan_paniscus
ENSCPOG00000030440	-	100	95.337	ENSPPRG00000012985	AICDA	97	95.337	Panthera_pardus
ENSCPOG00000030440	-	100	95.337	ENSPTIG00000020074	AICDA	97	95.337	Panthera_tigris_altaica
ENSCPOG00000030440	-	100	95.337	ENSPTRG00000004640	AICDA	97	95.337	Pan_troglodytes
ENSCPOG00000030440	-	100	95.337	ENSPANG00000017883	AICDA	97	95.337	Papio_anubis
ENSCPOG00000030440	-	94	61.579	ENSPKIG00000001499	aicda	100	61.579	Paramormyrops_kingsleyae
ENSCPOG00000030440	-	100	88.601	ENSPSIG00000013283	AICDA	98	88.601	Pelodiscus_sinensis
ENSCPOG00000030440	-	97	59.596	ENSPMGG00000014598	aicda	93	59.799	Periophthalmus_magnuspinnatus
ENSCPOG00000030440	-	100	93.264	ENSPEMG00000008352	Aicda	97	93.264	Peromyscus_maniculatus_bairdii
ENSCPOG00000030440	-	100	89.637	ENSPCIG00000023974	AICDA	97	89.637	Phascolarctos_cinereus
ENSCPOG00000030440	-	93	55.652	ENSPFOG00000011197	aicda	97	55.652	Poecilia_formosa
ENSCPOG00000030440	-	100	56.585	ENSPLAG00000014098	aicda	98	56.585	Poecilia_latipinna
ENSCPOG00000030440	-	100	56.585	ENSPMEG00000024203	aicda	96	56.585	Poecilia_mexicana
ENSCPOG00000030440	-	100	56.585	ENSPREG00000009041	aicda	96	56.585	Poecilia_reticulata
ENSCPOG00000030440	-	100	95.855	ENSPPYG00000004242	AICDA	98	95.855	Pongo_abelii
ENSCPOG00000030440	-	53	89.091	ENSPCAG00000009544	-	52	89.091	Procavia_capensis
ENSCPOG00000030440	-	69	93.284	ENSPCOG00000003380	-	80	93.284	Propithecus_coquereli
ENSCPOG00000030440	-	100	94.301	ENSPVAG00000012185	AICDA	97	94.301	Pteropus_vampyrus
ENSCPOG00000030440	-	100	61.538	ENSPNYG00000000988	aicda	99	61.538	Pundamilia_nyererei
ENSCPOG00000030440	-	100	61.765	ENSPNAG00000019237	aicda	98	61.765	Pygocentrus_nattereri
ENSCPOG00000030440	-	100	93.782	ENSRNOG00000015478	Aicda	97	93.782	Rattus_norvegicus
ENSCPOG00000030440	-	100	95.337	ENSRBIG00000026659	AICDA	97	95.337	Rhinopithecus_bieti
ENSCPOG00000030440	-	100	95.337	ENSRROG00000032866	AICDA	97	95.337	Rhinopithecus_roxellana
ENSCPOG00000030440	-	100	76.166	ENSSBOG00000035758	AICDA	97	76.166	Saimiri_boliviensis_boliviensis
ENSCPOG00000030440	-	100	88.601	ENSSHAG00000008694	AICDA	97	88.601	Sarcophilus_harrisii
ENSCPOG00000030440	-	100	60.396	ENSSFOG00015001695	aicda	96	60.396	Scleropages_formosus
ENSCPOG00000030440	-	98	58.209	ENSSMAG00000012339	aicda	86	58.209	Scophthalmus_maximus
ENSCPOG00000030440	-	100	59.794	ENSSDUG00000009894	aicda	95	59.794	Seriola_dumerili
ENSCPOG00000030440	-	100	60.309	ENSSLDG00000023022	aicda	94	60.309	Seriola_lalandi_dorsalis
ENSCPOG00000030440	-	100	82.383	ENSSPUG00000009022	AICDA	98	82.383	Sphenodon_punctatus
ENSCPOG00000030440	-	100	56.098	ENSSPAG00000021499	aicda	64	56.098	Stegastes_partitus
ENSCPOG00000030440	-	100	92.228	ENSSSCG00000000667	AICDA	97	92.228	Sus_scrofa
ENSCPOG00000030440	-	100	81.347	ENSTGUG00000013115	AICDA	98	81.347	Taeniopygia_guttata
ENSCPOG00000030440	-	99	55.882	ENSTRUG00000007079	aicda	95	55.882	Takifugu_rubripes
ENSCPOG00000030440	-	100	56.039	ENSTNIG00000008118	aicda	97	56.039	Tetraodon_nigroviridis
ENSCPOG00000030440	-	100	63.212	ENSTBEG00000002559	AICDA	98	63.212	Tupaia_belangeri
ENSCPOG00000030440	-	91	94.915	ENSTTRG00000000703	AICDA	97	94.915	Tursiops_truncatus
ENSCPOG00000030440	-	98	96.296	ENSUAMG00000011642	AICDA	96	96.296	Ursus_americanus
ENSCPOG00000030440	-	98	96.296	ENSUMAG00000016540	AICDA	96	96.296	Ursus_maritimus
ENSCPOG00000030440	-	76	95.238	ENSVPAG00000003950	AICDA	100	95.238	Vicugna_pacos
ENSCPOG00000030440	-	100	70.103	ENSXETG00000023905	aicda	97	70.103	Xenopus_tropicalis
ENSCPOG00000030440	-	100	56.186	ENSXCOG00000019386	aicda	89	56.186	Xiphophorus_couchianus
ENSCPOG00000030440	-	100	57.732	ENSXMAG00000011889	aicda	90	57.732	Xiphophorus_maculatus