EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000030450 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 387 bases
Position: chrDS562990.1:1318297-1318683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030678	RNA_pol_L_2	PF13656.6	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035067	-	300	-	ENSCPOP00000030678	99 (aa)	-	A0A286XZC8

Gene Model

Click here to download ENSCPOG00000030450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000030450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000030450	-	99	55.469	ENSG00000186184	POLR1D	96	55.469	Homo_sapiens
ENSCPOG00000030450	-	69	55.882	ENSAPOG00000021882	polr1d	56	61.017	Acanthochromis_polyacanthus
ENSCPOG00000030450	-	70	81.159	ENSAMEG00000019095	POLR1D	55	81.159	Ailuropoda_melanoleuca
ENSCPOG00000030450	-	67	64.179	ENSACIG00000013328	polr1d	58	64.179	Amphilophus_citrinellus
ENSCPOG00000030450	-	67	57.576	ENSAOCG00000018500	polr1d	58	57.576	Amphiprion_ocellaris
ENSCPOG00000030450	-	65	57.812	ENSAPEG00000009489	polr1d	56	57.812	Amphiprion_percula
ENSCPOG00000030450	-	67	56.061	ENSATEG00000019322	polr1d	58	56.061	Anabas_testudineus
ENSCPOG00000030450	-	55	64.815	ENSAPLG00000012757	POLR1D	100	64.815	Anas_platyrhynchos
ENSCPOG00000030450	-	67	62.121	ENSACAG00000015753	POLR1D	57	62.121	Anolis_carolinensis
ENSCPOG00000030450	-	99	55.469	ENSANAG00000024486	POLR1D	96	55.469	Aotus_nancymaae
ENSCPOG00000030450	-	62	65.574	ENSACLG00000023805	polr1d	54	65.574	Astatotilapia_calliptera
ENSCPOG00000030450	-	64	53.968	ENSAMXG00000036118	polr1d	55	53.968	Astyanax_mexicanus
ENSCPOG00000030450	-	99	54.688	ENSBTAG00000008642	POLR1D	96	54.688	Bos_taurus
ENSCPOG00000030450	-	99	54.688	ENSBTAG00000033252	-	96	54.688	Bos_taurus
ENSCPOG00000030450	-	99	56.250	ENSCJAG00000044669	POLR1D	96	56.250	Callithrix_jacchus
ENSCPOG00000030450	-	99	55.469	ENSCAFG00000006755	POLR1D	96	55.469	Canis_familiaris
ENSCPOG00000030450	-	99	54.688	ENSCHIG00000021910	POLR1D	96	54.688	Capra_hircus
ENSCPOG00000030450	-	71	69.444	ENSTSYG00000034852	-	60	69.444	Carlito_syrichta
ENSCPOG00000030450	-	70	78.261	ENSTSYG00000026817	-	52	78.261	Carlito_syrichta
ENSCPOG00000030450	-	100	98.990	ENSCAPG00000006058	-	100	98.990	Cavia_aperea
ENSCPOG00000030450	-	99	51.754	ENSCCAG00000020191	-	96	51.754	Cebus_capucinus
ENSCPOG00000030450	-	99	54.688	ENSCCAG00000021349	-	96	54.688	Cebus_capucinus
ENSCPOG00000030450	-	99	57.025	ENSCATG00000022900	-	96	57.025	Cercocebus_atys
ENSCPOG00000030450	-	99	55.469	ENSCATG00000030710	-	96	55.469	Cercocebus_atys
ENSCPOG00000030450	-	70	85.507	ENSCLAG00000017623	POLR1D	56	85.507	Chinchilla_lanigera
ENSCPOG00000030450	-	58	77.193	ENSCPBG00000004719	POLR1D	56	77.193	Chrysemys_picta_bellii
ENSCPOG00000030450	-	99	54.688	ENSCANG00000037694	-	96	54.688	Colobus_angolensis_palliatus
ENSCPOG00000030450	-	99	53.906	ENSCANG00000028632	-	96	53.906	Colobus_angolensis_palliatus
ENSCPOG00000030450	-	99	54.688	ENSCGRG00001021251	Polr1d	96	54.688	Cricetulus_griseus_chok1gshd
ENSCPOG00000030450	-	99	54.688	ENSCGRG00000011639	Polr1d	96	54.688	Cricetulus_griseus_crigri
ENSCPOG00000030450	-	64	61.905	ENSCSEG00000018268	polr1d	60	60.000	Cynoglossus_semilaevis
ENSCPOG00000030450	-	65	59.375	ENSCVAG00000018527	polr1d	56	59.375	Cyprinodon_variegatus
ENSCPOG00000030450	-	67	54.545	ENSDARG00000037570	polr1d	59	54.545	Danio_rerio
ENSCPOG00000030450	-	97	55.556	ENSDNOG00000043676	-	95	55.556	Dasypus_novemcinctus
ENSCPOG00000030450	-	99	53.125	ENSDORG00000029155	Polr1d	96	53.125	Dipodomys_ordii
ENSCPOG00000030450	-	63	38.710	FBgn0086447	l(2)37Cg	58	38.710	Drosophila_melanogaster
ENSCPOG00000030450	-	70	81.159	ENSETEG00000012797	POLR1D	56	81.159	Echinops_telfairi
ENSCPOG00000030450	-	100	55.814	ENSEASG00005022487	POLR1D	100	55.814	Equus_asinus_asinus
ENSCPOG00000030450	-	70	79.710	ENSEEUG00000013144	POLR1D	56	79.710	Erinaceus_europaeus
ENSCPOG00000030450	-	66	58.462	ENSELUG00000005105	rpac2	57	58.462	Esox_lucius
ENSCPOG00000030450	-	100	55.039	ENSFCAG00000030162	POLR1D	97	55.039	Felis_catus
ENSCPOG00000030450	-	67	65.152	ENSFALG00000011463	POLR1D	65	65.152	Ficedula_albicollis
ENSCPOG00000030450	-	99	57.031	ENSFDAG00000004463	POLR1D	96	57.031	Fukomys_damarensis
ENSCPOG00000030450	-	67	60.606	ENSFHEG00000015410	polr1d	57	60.606	Fundulus_heteroclitus
ENSCPOG00000030450	-	71	58.571	ENSGALG00000007470	POLR1D	69	58.571	Gallus_gallus
ENSCPOG00000030450	-	65	60.938	ENSGAFG00000001693	polr1d	56	60.938	Gambusia_affinis
ENSCPOG00000030450	-	69	54.412	ENSGACG00000018585	polr1d	58	54.412	Gasterosteus_aculeatus
ENSCPOG00000030450	-	67	71.212	ENSGAGG00000008503	POLR1D	58	71.212	Gopherus_agassizii
ENSCPOG00000030450	-	99	55.469	ENSGGOG00000004235	POLR1D	96	55.469	Gorilla_gorilla
ENSCPOG00000030450	-	67	59.091	ENSHBUG00000002111	polr1d	58	59.091	Haplochromis_burtoni
ENSCPOG00000030450	-	99	57.031	ENSHGLG00000003202	POLR1D	96	57.031	Heterocephalus_glaber_female
ENSCPOG00000030450	-	99	57.031	ENSHGLG00100009393	POLR1D	96	57.031	Heterocephalus_glaber_male
ENSCPOG00000030450	-	67	56.061	ENSHCOG00000003258	polr1d	58	56.061	Hippocampus_comes
ENSCPOG00000030450	-	67	60.606	ENSIPUG00000014810	polr1d	57	60.606	Ictalurus_punctatus
ENSCPOG00000030450	-	99	56.250	ENSSTOG00000013877	POLR1D	96	56.250	Ictidomys_tridecemlineatus
ENSCPOG00000030450	-	70	76.812	ENSJJAG00000022671	-	58	76.812	Jaculus_jaculus
ENSCPOG00000030450	-	67	57.576	ENSKMAG00000015256	polr1d	58	57.576	Kryptolebias_marmoratus
ENSCPOG00000030450	-	65	57.812	ENSLBEG00000015919	polr1d	56	57.812	Labrus_bergylta
ENSCPOG00000030450	-	67	63.636	ENSLACG00000006810	POLR1D	55	63.636	Latimeria_chalumnae
ENSCPOG00000030450	-	96	53.600	ENSLAFG00000032290	POLR1D	94	53.600	Loxodonta_africana
ENSCPOG00000030450	-	70	79.710	ENSMFAG00000045264	POLR1D	53	79.710	Macaca_fascicularis
ENSCPOG00000030450	-	99	62.264	ENSMMUG00000041570	-	95	62.264	Macaca_mulatta
ENSCPOG00000030450	-	70	79.710	ENSMMUG00000020386	POLR1D	59	79.710	Macaca_mulatta
ENSCPOG00000030450	-	99	54.688	ENSMNEG00000008630	-	96	54.688	Macaca_nemestrina
ENSCPOG00000030450	-	98	59.664	ENSMNEG00000038120	-	95	59.664	Macaca_nemestrina
ENSCPOG00000030450	-	99	54.688	ENSMLEG00000041048	-	96	54.688	Mandrillus_leucophaeus
ENSCPOG00000030450	-	99	54.545	ENSMLEG00000032251	-	96	54.545	Mandrillus_leucophaeus
ENSCPOG00000030450	-	61	63.333	ENSMAMG00000014834	polr1d	56	63.333	Mastacembelus_armatus
ENSCPOG00000030450	-	62	65.574	ENSMZEG00005006638	polr1d	54	65.574	Maylandia_zebra
ENSCPOG00000030450	-	60	69.492	ENSMGAG00000005322	POLR1D	54	69.492	Meleagris_gallopavo
ENSCPOG00000030450	-	99	54.688	ENSMAUG00000001946	Polr1d	96	54.688	Mesocricetus_auratus
ENSCPOG00000030450	-	99	56.250	ENSMICG00000016883	-	96	56.250	Microcebus_murinus
ENSCPOG00000030450	-	99	40.625	ENSMICG00000007349	-	97	40.625	Microcebus_murinus
ENSCPOG00000030450	-	99	53.906	ENSMOCG00000021288	Polr1d	96	53.906	Microtus_ochrogaster
ENSCPOG00000030450	-	67	54.545	ENSMMOG00000009605	polr1d	58	54.545	Mola_mola
ENSCPOG00000030450	-	67	74.242	ENSMODG00000023881	POLR1D	58	74.242	Monodelphis_domestica
ENSCPOG00000030450	-	64	60.317	ENSMALG00000010652	polr1d	55	60.317	Monopterus_albus
ENSCPOG00000030450	-	100	52.713	MGP_CAROLIEiJ_G0028034	Polr1d	97	52.713	Mus_caroli
ENSCPOG00000030450	-	100	52.713	ENSMUSG00000029642	Polr1d	97	52.713	Mus_musculus
ENSCPOG00000030450	-	100	52.713	MGP_PahariEiJ_G0024600	Polr1d	97	52.713	Mus_pahari
ENSCPOG00000030450	-	100	53.488	MGP_SPRETEiJ_G0029032	Polr1d	97	53.488	Mus_spretus
ENSCPOG00000030450	-	70	79.710	ENSMLUG00000004118	-	52	79.710	Myotis_lucifugus
ENSCPOG00000030450	-	99	54.688	ENSMLUG00000027169	-	96	54.688	Myotis_lucifugus
ENSCPOG00000030450	-	67	83.333	ENSNGAG00000006014	Polr1d	57	83.333	Nannospalax_galili
ENSCPOG00000030450	-	67	59.091	ENSNBRG00000020327	polr1d	58	59.091	Neolamprologus_brichardi
ENSCPOG00000030450	-	99	55.469	ENSNLEG00000000358	POLR1D	96	55.469	Nomascus_leucogenys
ENSCPOG00000030450	-	99	57.895	ENSODEG00000014801	-	96	57.895	Octodon_degus
ENSCPOG00000030450	-	99	56.250	ENSODEG00000005294	-	96	56.250	Octodon_degus
ENSCPOG00000030450	-	66	70.769	ENSOANG00000008708	-	60	70.769	Ornithorhynchus_anatinus
ENSCPOG00000030450	-	99	54.688	ENSOCUG00000015706	POLR1D	79	54.688	Oryctolagus_cuniculus
ENSCPOG00000030450	-	67	60.606	ENSORLG00000010257	polr1d	58	60.606	Oryzias_latipes
ENSCPOG00000030450	-	99	57.031	ENSOGAG00000014601	POLR1D	96	57.031	Otolemur_garnettii
ENSCPOG00000030450	-	70	81.159	ENSOARG00000017005	POLR1D	53	81.159	Ovis_aries
ENSCPOG00000030450	-	97	56.349	ENSPPAG00000028138	POLR1D	95	56.349	Pan_paniscus
ENSCPOG00000030450	-	100	55.039	ENSPPRG00000003381	POLR1D	97	55.039	Panthera_pardus
ENSCPOG00000030450	-	71	80.000	ENSPTIG00000018137	POLR1D	53	80.000	Panthera_tigris_altaica
ENSCPOG00000030450	-	99	55.469	ENSPTRG00000005734	POLR1D	96	55.469	Pan_troglodytes
ENSCPOG00000030450	-	99	54.688	ENSPANG00000020259	-	96	54.688	Papio_anubis
ENSCPOG00000030450	-	99	52.893	ENSPANG00000035051	-	96	52.893	Papio_anubis
ENSCPOG00000030450	-	66	60.000	ENSPKIG00000021891	polr1d	52	55.385	Paramormyrops_kingsleyae
ENSCPOG00000030450	-	67	72.727	ENSPSIG00000011822	POLR1D	51	72.727	Pelodiscus_sinensis
ENSCPOG00000030450	-	68	52.239	ENSPMGG00000010359	polr1d	58	52.239	Periophthalmus_magnuspinnatus
ENSCPOG00000030450	-	70	76.812	ENSPEMG00000006336	-	53	76.812	Peromyscus_maniculatus_bairdii
ENSCPOG00000030450	-	68	55.224	ENSPMAG00000004228	polr1d	56	55.224	Petromyzon_marinus
ENSCPOG00000030450	-	67	74.242	ENSPCIG00000001673	POLR1D	58	74.242	Phascolarctos_cinereus
ENSCPOG00000030450	-	65	60.938	ENSPFOG00000023343	polr1d	74	60.938	Poecilia_formosa
ENSCPOG00000030450	-	65	60.938	ENSPLAG00000009675	polr1d	56	60.938	Poecilia_latipinna
ENSCPOG00000030450	-	65	60.938	ENSPMEG00000004628	polr1d	56	60.938	Poecilia_mexicana
ENSCPOG00000030450	-	65	60.938	ENSPREG00000022032	polr1d	56	60.938	Poecilia_reticulata
ENSCPOG00000030450	-	99	54.688	ENSPCOG00000028175	POLR1D	96	54.688	Propithecus_coquereli
ENSCPOG00000030450	-	67	59.091	ENSPNYG00000000107	polr1d	58	59.091	Pundamilia_nyererei
ENSCPOG00000030450	-	64	52.381	ENSPNAG00000001512	polr1d	53	52.381	Pygocentrus_nattereri
ENSCPOG00000030450	-	99	53.906	ENSRBIG00000000336	-	96	53.906	Rhinopithecus_bieti
ENSCPOG00000030450	-	99	54.688	ENSRBIG00000036378	-	96	54.688	Rhinopithecus_bieti
ENSCPOG00000030450	-	99	53.906	ENSRROG00000026751	-	96	53.906	Rhinopithecus_roxellana
ENSCPOG00000030450	-	99	54.688	ENSRROG00000042232	-	96	54.688	Rhinopithecus_roxellana
ENSCPOG00000030450	-	87	53.846	ENSSBOG00000030146	-	85	53.846	Saimiri_boliviensis_boliviensis
ENSCPOG00000030450	-	99	55.469	ENSSBOG00000028482	-	96	55.469	Saimiri_boliviensis_boliviensis
ENSCPOG00000030450	-	71	70.000	ENSSHAG00000001190	POLR1D	54	70.000	Sarcophilus_harrisii
ENSCPOG00000030450	-	68	58.209	ENSSFOG00015011375	polr1d	59	58.209	Scleropages_formosus
ENSCPOG00000030450	-	67	57.576	ENSSMAG00000011861	polr1d	58	57.576	Scophthalmus_maximus
ENSCPOG00000030450	-	67	56.061	ENSSDUG00000011930	polr1d	58	56.061	Seriola_dumerili
ENSCPOG00000030450	-	70	55.072	ENSSLDG00000023871	polr1d	58	55.072	Seriola_lalandi_dorsalis
ENSCPOG00000030450	-	99	54.688	ENSSARG00000007840	POLR1D	96	54.688	Sorex_araneus
ENSCPOG00000030450	-	70	62.319	ENSSPUG00000005786	POLR1D	58	63.235	Sphenodon_punctatus
ENSCPOG00000030450	-	65	60.938	ENSSPAG00000011764	polr1d	56	60.938	Stegastes_partitus
ENSCPOG00000030450	-	100	54.264	ENSSSCG00000009310	POLR1D	97	54.264	Sus_scrofa
ENSCPOG00000030450	-	67	66.667	ENSTGUG00000005450	POLR1D	69	66.667	Taeniopygia_guttata
ENSCPOG00000030450	-	65	57.812	ENSTRUG00000019741	polr1d	56	57.812	Takifugu_rubripes
ENSCPOG00000030450	-	70	79.710	ENSTBEG00000007006	POLR1D	56	79.710	Tupaia_belangeri
ENSCPOG00000030450	-	99	55.469	ENSUAMG00000011413	POLR1D	96	55.469	Ursus_americanus
ENSCPOG00000030450	-	70	81.159	ENSUMAG00000016968	POLR1D	54	81.159	Ursus_maritimus
ENSCPOG00000030450	-	99	55.469	ENSVVUG00000009216	POLR1D	96	55.469	Vulpes_vulpes