EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000030909 (Gene tree)
Gene ID: 100719062
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 7199 bases
Position: chrDS562868.1:21605456-21612654
Accession: 100719062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000024220	Exo_endo_phos	PF03372.23	4.8e-22	1	1
ENSCPOP00000032125	Exo_endo_phos	PF03372.23	4.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000041801	APEX1-202	6081	XM_003474538	ENSCPOP00000024220	318 (aa)	XP_003474586	A0A286XFH5
ENSCPOT00000033707	APEX1-201	6232	-	ENSCPOP00000032125	318 (aa)	XP_023422708	A0A286XFH5

Gene Model

Click here to download ENSCPOG00000030909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000030909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000030909	APEX1	100	94.340	ENSG00000100823	APEX1	100	94.340	Homo_sapiens
ENSCPOG00000030909	APEX1	88	69.534	ENSAPOG00000017002	apex1	95	68.041	Acanthochromis_polyacanthus
ENSCPOG00000030909	APEX1	100	96.541	ENSAMEG00000005418	APEX1	100	96.541	Ailuropoda_melanoleuca
ENSCPOG00000030909	APEX1	87	71.223	ENSACIG00000010653	apex1	98	69.759	Amphilophus_citrinellus
ENSCPOG00000030909	APEX1	88	69.534	ENSAOCG00000009649	apex1	94	68.041	Amphiprion_ocellaris
ENSCPOG00000030909	APEX1	88	69.534	ENSAPEG00000021453	apex1	94	68.041	Amphiprion_percula
ENSCPOG00000030909	APEX1	86	71.898	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSCPOG00000030909	APEX1	100	70.497	ENSACAG00000008099	APEX1	100	70.497	Anolis_carolinensis
ENSCPOG00000030909	APEX1	100	94.654	ENSANAG00000030117	APEX1	100	94.654	Aotus_nancymaae
ENSCPOG00000030909	APEX1	86	72.727	ENSACLG00000018441	apex1	99	67.722	Astatotilapia_calliptera
ENSCPOG00000030909	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSCPOG00000030909	APEX1	100	94.340	ENSBTAG00000002745	APEX1	100	94.340	Bos_taurus
ENSCPOG00000030909	APEX1	84	43.542	WBGene00001372	exo-3	93	43.542	Caenorhabditis_elegans
ENSCPOG00000030909	APEX1	100	95.283	ENSCJAG00000009726	APEX1	100	95.283	Callithrix_jacchus
ENSCPOG00000030909	APEX1	100	94.025	ENSCAFG00000032033	APEX1	100	94.025	Canis_familiaris
ENSCPOG00000030909	APEX1	54	89.535	ENSCAFG00020023002	-	96	89.535	Canis_lupus_dingo
ENSCPOG00000030909	APEX1	100	94.025	ENSCAFG00020014377	-	100	94.025	Canis_lupus_dingo
ENSCPOG00000030909	APEX1	100	93.711	ENSCHIG00000007298	-	100	93.711	Capra_hircus
ENSCPOG00000030909	APEX1	98	75.962	ENSCHIG00000014537	-	99	75.962	Capra_hircus
ENSCPOG00000030909	APEX1	100	94.654	ENSTSYG00000034813	APEX1	100	94.654	Carlito_syrichta
ENSCPOG00000030909	APEX1	85	90.775	ENSCAPG00000016235	APEX1	91	100.000	Cavia_aperea
ENSCPOG00000030909	APEX1	100	82.075	ENSCCAG00000031931	-	100	82.075	Cebus_capucinus
ENSCPOG00000030909	APEX1	100	95.283	ENSCCAG00000033056	-	100	95.283	Cebus_capucinus
ENSCPOG00000030909	APEX1	100	94.025	ENSCATG00000015580	APEX1	100	94.025	Cercocebus_atys
ENSCPOG00000030909	APEX1	100	96.855	ENSCLAG00000001002	APEX1	100	96.855	Chinchilla_lanigera
ENSCPOG00000030909	APEX1	100	93.711	ENSCSAG00000016685	-	100	93.711	Chlorocebus_sabaeus
ENSCPOG00000030909	APEX1	100	93.711	ENSCSAG00000016670	-	100	93.711	Chlorocebus_sabaeus
ENSCPOG00000030909	APEX1	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSCPOG00000030909	APEX1	91	55.254	ENSCING00000008137	-	94	55.254	Ciona_intestinalis
ENSCPOG00000030909	APEX1	83	52.453	ENSCSAVG00000007144	-	100	53.282	Ciona_savignyi
ENSCPOG00000030909	APEX1	100	94.340	ENSCANG00000030726	APEX1	100	94.340	Colobus_angolensis_palliatus
ENSCPOG00000030909	APEX1	100	90.566	ENSCGRG00001017046	Apex1	100	90.566	Cricetulus_griseus_chok1gshd
ENSCPOG00000030909	APEX1	100	90.566	ENSCGRG00000008984	Apex1	100	90.566	Cricetulus_griseus_crigri
ENSCPOG00000030909	APEX1	99	64.038	ENSCSEG00000017499	apex1	99	64.038	Cynoglossus_semilaevis
ENSCPOG00000030909	APEX1	88	71.685	ENSCVAG00000022075	apex1	99	67.089	Cyprinodon_variegatus
ENSCPOG00000030909	APEX1	100	66.038	ENSDARG00000045843	apex1	100	66.352	Danio_rerio
ENSCPOG00000030909	APEX1	100	89.623	ENSDNOG00000042234	APEX1	95	89.623	Dasypus_novemcinctus
ENSCPOG00000030909	APEX1	100	94.654	ENSDORG00000001616	Apex1	100	94.654	Dipodomys_ordii
ENSCPOG00000030909	APEX1	100	93.711	ENSETEG00000004855	-	100	93.711	Echinops_telfairi
ENSCPOG00000030909	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSCPOG00000030909	APEX1	100	95.912	ENSEASG00005017489	APEX1	74	95.912	Equus_asinus_asinus
ENSCPOG00000030909	APEX1	100	95.912	ENSECAG00000022325	APEX1	82	95.912	Equus_caballus
ENSCPOG00000030909	APEX1	91	92.708	ENSEEUG00000012569	APEX1	100	92.708	Erinaceus_europaeus
ENSCPOG00000030909	APEX1	100	64.780	ENSELUG00000021706	apex1	100	65.723	Esox_lucius
ENSCPOG00000030909	APEX1	100	96.226	ENSFCAG00000030869	APEX1	100	96.226	Felis_catus
ENSCPOG00000030909	APEX1	100	95.912	ENSFDAG00000006120	APEX1	100	95.912	Fukomys_damarensis
ENSCPOG00000030909	APEX1	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSCPOG00000030909	APEX1	99	61.950	ENSGMOG00000007943	apex1	99	61.950	Gadus_morhua
ENSCPOG00000030909	APEX1	88	72.401	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSCPOG00000030909	APEX1	88	69.534	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSCPOG00000030909	APEX1	100	70.533	ENSGAGG00000014999	APEX1	100	70.533	Gopherus_agassizii
ENSCPOG00000030909	APEX1	100	94.654	ENSGGOG00000002128	APEX1	100	94.654	Gorilla_gorilla
ENSCPOG00000030909	APEX1	99	66.772	ENSHBUG00000005894	apex1	99	67.405	Haplochromis_burtoni
ENSCPOG00000030909	APEX1	100	97.170	ENSHGLG00000002848	APEX1	100	97.170	Heterocephalus_glaber_female
ENSCPOG00000030909	APEX1	100	97.170	ENSHGLG00100017878	APEX1	100	97.170	Heterocephalus_glaber_male
ENSCPOG00000030909	APEX1	99	66.246	ENSHCOG00000009961	apex1	99	66.246	Hippocampus_comes
ENSCPOG00000030909	APEX1	100	67.085	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSCPOG00000030909	APEX1	100	94.654	ENSSTOG00000010096	APEX1	100	94.654	Ictidomys_tridecemlineatus
ENSCPOG00000030909	APEX1	100	94.025	ENSJJAG00000012067	-	100	94.025	Jaculus_jaculus
ENSCPOG00000030909	APEX1	100	84.591	ENSJJAG00000003660	-	100	84.591	Jaculus_jaculus
ENSCPOG00000030909	APEX1	94	84.564	ENSJJAG00000020465	-	96	84.564	Jaculus_jaculus
ENSCPOG00000030909	APEX1	88	71.326	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSCPOG00000030909	APEX1	88	69.176	ENSLBEG00000010248	apex1	99	64.984	Labrus_bergylta
ENSCPOG00000030909	APEX1	100	66.562	ENSLACG00000008617	APEX1	100	66.562	Latimeria_chalumnae
ENSCPOG00000030909	APEX1	100	66.770	ENSLOCG00000015516	apex1	99	66.770	Lepisosteus_oculatus
ENSCPOG00000030909	APEX1	100	93.082	ENSLAFG00000021872	APEX1	100	93.082	Loxodonta_africana
ENSCPOG00000030909	APEX1	100	94.025	ENSMFAG00000002565	APEX1	100	94.025	Macaca_fascicularis
ENSCPOG00000030909	APEX1	100	94.025	ENSMMUG00000048039	APEX1	100	94.025	Macaca_mulatta
ENSCPOG00000030909	APEX1	100	94.025	ENSMNEG00000036944	APEX1	100	94.025	Macaca_nemestrina
ENSCPOG00000030909	APEX1	100	94.025	ENSMLEG00000042125	APEX1	100	94.025	Mandrillus_leucophaeus
ENSCPOG00000030909	APEX1	88	71.326	ENSMAMG00000023526	apex1	99	67.192	Mastacembelus_armatus
ENSCPOG00000030909	APEX1	86	72.727	ENSMZEG00005014187	apex1	99	67.722	Maylandia_zebra
ENSCPOG00000030909	APEX1	100	91.509	ENSMAUG00000013994	Apex1	100	91.509	Mesocricetus_auratus
ENSCPOG00000030909	APEX1	100	94.969	ENSMICG00000043554	APEX1	100	94.969	Microcebus_murinus
ENSCPOG00000030909	APEX1	100	91.824	ENSMOCG00000013721	Apex1	100	91.824	Microtus_ochrogaster
ENSCPOG00000030909	APEX1	88	67.857	ENSMMOG00000010031	apex1	97	63.522	Mola_mola
ENSCPOG00000030909	APEX1	100	84.062	ENSMODG00000007125	APEX1	100	85.404	Monodelphis_domestica
ENSCPOG00000030909	APEX1	88	64.158	ENSMALG00000011699	apex1	79	62.799	Monopterus_albus
ENSCPOG00000030909	APEX1	99	93.060	MGP_CAROLIEiJ_G0019209	Apex1	99	93.060	Mus_caroli
ENSCPOG00000030909	APEX1	100	93.711	ENSMUSG00000035960	Apex1	100	93.711	Mus_musculus
ENSCPOG00000030909	APEX1	100	93.711	MGP_PahariEiJ_G0030232	Apex1	100	93.711	Mus_pahari
ENSCPOG00000030909	APEX1	100	93.711	MGP_SPRETEiJ_G0020101	Apex1	100	93.711	Mus_spretus
ENSCPOG00000030909	APEX1	100	94.375	ENSMLUG00000028957	APEX1	100	94.375	Myotis_lucifugus
ENSCPOG00000030909	APEX1	100	93.396	ENSNGAG00000002725	-	100	93.396	Nannospalax_galili
ENSCPOG00000030909	APEX1	100	70.755	ENSNGAG00000021748	-	99	70.755	Nannospalax_galili
ENSCPOG00000030909	APEX1	86	72.364	ENSNBRG00000005334	apex1	91	67.405	Neolamprologus_brichardi
ENSCPOG00000030909	APEX1	100	94.340	ENSNLEG00000010839	APEX1	100	94.340	Nomascus_leucogenys
ENSCPOG00000030909	APEX1	100	85.849	ENSMEUG00000014519	APEX1	100	85.849	Notamacropus_eugenii
ENSCPOG00000030909	APEX1	100	92.767	ENSOPRG00000014029	APEX1	100	92.767	Ochotona_princeps
ENSCPOG00000030909	APEX1	100	74.074	ENSODEG00000006583	-	100	74.074	Octodon_degus
ENSCPOG00000030909	APEX1	97	77.346	ENSODEG00000004777	-	99	77.346	Octodon_degus
ENSCPOG00000030909	APEX1	100	97.170	ENSODEG00000001703	-	100	97.170	Octodon_degus
ENSCPOG00000030909	APEX1	87	72.662	ENSONIG00000012089	apex1	99	68.038	Oreochromis_niloticus
ENSCPOG00000030909	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	78.704	Ornithorhynchus_anatinus
ENSCPOG00000030909	APEX1	100	93.396	ENSOCUG00000005022	APEX1	100	93.396	Oryctolagus_cuniculus
ENSCPOG00000030909	APEX1	99	66.981	ENSORLG00000012378	apex1	99	67.925	Oryzias_latipes
ENSCPOG00000030909	APEX1	99	66.981	ENSORLG00020021371	apex1	99	67.925	Oryzias_latipes_hni
ENSCPOG00000030909	APEX1	99	66.981	ENSORLG00015020089	apex1	99	67.925	Oryzias_latipes_hsok
ENSCPOG00000030909	APEX1	99	67.296	ENSOMEG00000018876	apex1	99	67.610	Oryzias_melastigma
ENSCPOG00000030909	APEX1	98	83.654	ENSOGAG00000029355	-	100	83.654	Otolemur_garnettii
ENSCPOG00000030909	APEX1	100	94.340	ENSOGAG00000013335	-	100	94.340	Otolemur_garnettii
ENSCPOG00000030909	APEX1	100	93.082	ENSOARG00000019740	-	100	93.082	Ovis_aries
ENSCPOG00000030909	APEX1	97	89.935	ENSOARG00000001876	-	100	89.935	Ovis_aries
ENSCPOG00000030909	APEX1	99	79.747	ENSOARG00000014424	-	100	79.747	Ovis_aries
ENSCPOG00000030909	APEX1	100	94.654	ENSPPAG00000038760	APEX1	100	94.654	Pan_paniscus
ENSCPOG00000030909	APEX1	100	95.912	ENSPPRG00000011794	APEX1	100	95.912	Panthera_pardus
ENSCPOG00000030909	APEX1	100	96.226	ENSPTIG00000014829	APEX1	100	96.226	Panthera_tigris_altaica
ENSCPOG00000030909	APEX1	100	94.654	ENSPTRG00000006093	APEX1	100	94.654	Pan_troglodytes
ENSCPOG00000030909	APEX1	100	94.025	ENSPANG00000022757	APEX1	100	94.025	Papio_anubis
ENSCPOG00000030909	APEX1	87	68.953	ENSPKIG00000003504	apex1	100	64.396	Paramormyrops_kingsleyae
ENSCPOG00000030909	APEX1	76	67.490	ENSPMGG00000016596	apex1	73	67.490	Periophthalmus_magnuspinnatus
ENSCPOG00000030909	APEX1	100	93.082	ENSPEMG00000019097	Apex1	100	93.082	Peromyscus_maniculatus_bairdii
ENSCPOG00000030909	APEX1	94	67.000	ENSPMAG00000007275	-	99	67.000	Petromyzon_marinus
ENSCPOG00000030909	APEX1	100	83.072	ENSPCIG00000023274	APEX1	100	85.047	Phascolarctos_cinereus
ENSCPOG00000030909	APEX1	88	72.760	ENSPFOG00000004178	apex1	99	68.139	Poecilia_formosa
ENSCPOG00000030909	APEX1	88	72.401	ENSPLAG00000012779	apex1	99	68.139	Poecilia_latipinna
ENSCPOG00000030909	APEX1	88	72.760	ENSPMEG00000019623	apex1	99	68.139	Poecilia_mexicana
ENSCPOG00000030909	APEX1	88	72.043	ENSPREG00000014298	apex1	99	67.508	Poecilia_reticulata
ENSCPOG00000030909	APEX1	100	94.340	ENSPPYG00000005565	APEX1	100	94.340	Pongo_abelii
ENSCPOG00000030909	APEX1	100	91.195	ENSPCAG00000010376	APEX1	100	91.195	Procavia_capensis
ENSCPOG00000030909	APEX1	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSCPOG00000030909	APEX1	100	94.688	ENSPVAG00000010736	APEX1	100	94.688	Pteropus_vampyrus
ENSCPOG00000030909	APEX1	86	72.727	ENSPNYG00000023940	apex1	99	67.722	Pundamilia_nyererei
ENSCPOG00000030909	APEX1	93	65.878	ENSPNAG00000020897	apex1	96	65.763	Pygocentrus_nattereri
ENSCPOG00000030909	APEX1	100	92.767	ENSRNOG00000009663	Apex1	100	92.767	Rattus_norvegicus
ENSCPOG00000030909	APEX1	100	94.025	ENSRBIG00000038325	APEX1	99	94.025	Rhinopithecus_bieti
ENSCPOG00000030909	APEX1	100	79.874	ENSSBOG00000031372	-	100	79.874	Saimiri_boliviensis_boliviensis
ENSCPOG00000030909	APEX1	100	95.283	ENSSBOG00000018921	-	100	95.283	Saimiri_boliviensis_boliviensis
ENSCPOG00000030909	APEX1	100	82.099	ENSSHAG00000013524	APEX1	100	83.129	Sarcophilus_harrisii
ENSCPOG00000030909	APEX1	100	62.579	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSCPOG00000030909	APEX1	87	69.784	ENSSMAG00000013348	apex1	99	66.562	Scophthalmus_maximus
ENSCPOG00000030909	APEX1	88	69.534	ENSSDUG00000016377	apex1	99	65.190	Seriola_dumerili
ENSCPOG00000030909	APEX1	88	70.251	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSCPOG00000030909	APEX1	95	70.432	ENSSPUG00000000531	APEX1	99	70.432	Sphenodon_punctatus
ENSCPOG00000030909	APEX1	88	70.968	ENSSPAG00000000458	apex1	96	69.283	Stegastes_partitus
ENSCPOG00000030909	APEX1	98	55.346	ENSSSCG00000039705	-	98	57.718	Sus_scrofa
ENSCPOG00000030909	APEX1	100	94.654	ENSSSCG00000040060	-	100	94.654	Sus_scrofa
ENSCPOG00000030909	APEX1	74	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSCPOG00000030909	APEX1	87	68.705	ENSTRUG00000004268	apex1	95	64.557	Takifugu_rubripes
ENSCPOG00000030909	APEX1	99	64.241	ENSTNIG00000005778	apex1	99	64.241	Tetraodon_nigroviridis
ENSCPOG00000030909	APEX1	100	90.881	ENSTBEG00000006405	APEX1	100	90.881	Tupaia_belangeri
ENSCPOG00000030909	APEX1	74	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSCPOG00000030909	APEX1	100	96.541	ENSUAMG00000010457	APEX1	100	96.541	Ursus_americanus
ENSCPOG00000030909	APEX1	100	96.541	ENSUMAG00000009178	APEX1	100	96.541	Ursus_maritimus
ENSCPOG00000030909	APEX1	74	90.678	ENSVPAG00000005083	APEX1	100	90.678	Vicugna_pacos
ENSCPOG00000030909	APEX1	100	93.396	ENSVVUG00000009010	APEX1	100	93.396	Vulpes_vulpes
ENSCPOG00000030909	APEX1	100	66.667	ENSXETG00000024773	apex1	100	66.667	Xenopus_tropicalis
ENSCPOG00000030909	APEX1	88	72.401	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSCPOG00000030909	APEX1	93	68.404	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus