EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000031638 (Gene tree)
Gene ID: 100723783
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 25894 bases
Position: chrDS562857.1:28475604-28501497
Accession: 100723783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023168	RRM_1	PF00076.22	4e-17	1	2
ENSCPOP00000023168	RRM_1	PF00076.22	4e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000039774	RNPC3-201	3017	XM_003479179	ENSCPOP00000023168	517 (aa)	XP_003479227	A0A286XCL6

Gene Model

Click here to download ENSCPOG00000031638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000031638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000031638	RNPC3	100	91.296	ENSG00000185946	RNPC3	100	92.432	Homo_sapiens
ENSCPOG00000031638	RNPC3	95	55.040	ENSAPOG00000017371	rnpc3	97	55.040	Acanthochromis_polyacanthus
ENSCPOG00000031638	RNPC3	98	90.177	ENSAMEG00000001694	RNPC3	98	90.039	Ailuropoda_melanoleuca
ENSCPOG00000031638	RNPC3	95	52.400	ENSACIG00000021043	rnpc3	97	52.400	Amphilophus_citrinellus
ENSCPOG00000031638	RNPC3	95	54.890	ENSAOCG00000014052	rnpc3	95	54.890	Amphiprion_ocellaris
ENSCPOG00000031638	RNPC3	95	54.691	ENSAPEG00000008739	rnpc3	95	54.691	Amphiprion_percula
ENSCPOG00000031638	RNPC3	95	54.582	ENSATEG00000021263	rnpc3	97	54.582	Anabas_testudineus
ENSCPOG00000031638	RNPC3	87	70.678	ENSAPLG00000015605	RNPC3	99	70.925	Anas_platyrhynchos
ENSCPOG00000031638	RNPC3	95	67.276	ENSACAG00000002029	RNPC3	99	67.191	Anolis_carolinensis
ENSCPOG00000031638	RNPC3	100	90.716	ENSANAG00000019950	RNPC3	100	90.716	Aotus_nancymaae
ENSCPOG00000031638	RNPC3	95	52.906	ENSACLG00000014702	rnpc3	96	52.906	Astatotilapia_calliptera
ENSCPOG00000031638	RNPC3	94	57.831	ENSAMXG00000033372	rnpc3	96	57.347	Astyanax_mexicanus
ENSCPOG00000031638	RNPC3	100	90.329	ENSBTAG00000019091	RNPC3	100	90.329	Bos_taurus
ENSCPOG00000031638	RNPC3	100	87.041	ENSCJAG00000035686	RNPC3	100	86.267	Callithrix_jacchus
ENSCPOG00000031638	RNPC3	100	89.768	ENSCAFG00000019972	RNPC3	100	89.768	Canis_familiaris
ENSCPOG00000031638	RNPC3	100	89.961	ENSCAFG00020011300	RNPC3	100	89.961	Canis_lupus_dingo
ENSCPOG00000031638	RNPC3	100	90.135	ENSCHIG00000020361	RNPC3	100	90.135	Capra_hircus
ENSCPOG00000031638	RNPC3	100	89.168	ENSTSYG00000030256	RNPC3	100	89.168	Carlito_syrichta
ENSCPOG00000031638	RNPC3	84	87.816	ENSCAPG00000013600	RNPC3	97	87.646	Cavia_aperea
ENSCPOG00000031638	RNPC3	100	90.716	ENSCCAG00000024301	RNPC3	100	90.716	Cebus_capucinus
ENSCPOG00000031638	RNPC3	98	69.822	ENSCATG00000035930	-	99	69.428	Cercocebus_atys
ENSCPOG00000031638	RNPC3	99	90.874	ENSCATG00000002086	RNPC3	99	90.874	Cercocebus_atys
ENSCPOG00000031638	RNPC3	100	91.683	ENSCLAG00000005169	RNPC3	100	91.683	Chinchilla_lanigera
ENSCPOG00000031638	RNPC3	99	90.680	ENSCSAG00000001519	RNPC3	99	90.680	Chlorocebus_sabaeus
ENSCPOG00000031638	RNPC3	95	70.020	ENSCPBG00000028311	RNPC3	95	70.221	Chrysemys_picta_bellii
ENSCPOG00000031638	RNPC3	93	37.552	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSCPOG00000031638	RNPC3	99	91.262	ENSCANG00000031444	RNPC3	99	91.262	Colobus_angolensis_palliatus
ENSCPOG00000031638	RNPC3	99	88.566	ENSCGRG00001019276	Rnpc3	100	88.566	Cricetulus_griseus_chok1gshd
ENSCPOG00000031638	RNPC3	87	89.159	ENSCGRG00000000053	Rnpc3	100	89.159	Cricetulus_griseus_crigri
ENSCPOG00000031638	RNPC3	94	53.644	ENSCSEG00000013475	rnpc3	96	53.644	Cynoglossus_semilaevis
ENSCPOG00000031638	RNPC3	94	52.849	ENSCVAG00000002645	rnpc3	97	52.539	Cyprinodon_variegatus
ENSCPOG00000031638	RNPC3	95	57.937	ENSDARG00000011247	rnpc3	96	63.687	Danio_rerio
ENSCPOG00000031638	RNPC3	100	88.201	ENSDNOG00000047498	-	100	88.201	Dasypus_novemcinctus
ENSCPOG00000031638	RNPC3	100	88.588	ENSDNOG00000044555	-	100	88.588	Dasypus_novemcinctus
ENSCPOG00000031638	RNPC3	99	88.372	ENSDORG00000027343	Rnpc3	99	88.372	Dipodomys_ordii
ENSCPOG00000031638	RNPC3	95	47.665	ENSEBUG00000002068	rnpc3	97	48.141	Eptatretus_burgeri
ENSCPOG00000031638	RNPC3	100	89.961	ENSEASG00005015957	RNPC3	100	89.961	Equus_asinus_asinus
ENSCPOG00000031638	RNPC3	100	90.541	ENSECAG00000021148	RNPC3	100	90.541	Equus_caballus
ENSCPOG00000031638	RNPC3	95	53.307	ENSELUG00000002264	rnpc3	97	50.664	Esox_lucius
ENSCPOG00000031638	RNPC3	100	89.961	ENSFCAG00000024312	RNPC3	100	89.961	Felis_catus
ENSCPOG00000031638	RNPC3	87	72.247	ENSFALG00000002580	RNPC3	99	72.642	Ficedula_albicollis
ENSCPOG00000031638	RNPC3	99	93.411	ENSFDAG00000019948	RNPC3	100	93.411	Fukomys_damarensis
ENSCPOG00000031638	RNPC3	95	50.497	ENSFHEG00000020647	rnpc3	98	49.807	Fundulus_heteroclitus
ENSCPOG00000031638	RNPC3	95	52.894	ENSGMOG00000019213	rnpc3	95	51.587	Gadus_morhua
ENSCPOG00000031638	RNPC3	95	72.525	ENSGALG00000005162	RNPC3	89	71.515	Gallus_gallus
ENSCPOG00000031638	RNPC3	95	52.400	ENSGAFG00000017236	rnpc3	96	52.209	Gambusia_affinis
ENSCPOG00000031638	RNPC3	95	54.490	ENSGACG00000002048	rnpc3	96	53.755	Gasterosteus_aculeatus
ENSCPOG00000031638	RNPC3	95	70.221	ENSGAGG00000008438	RNPC3	95	70.624	Gopherus_agassizii
ENSCPOG00000031638	RNPC3	98	74.556	ENSGGOG00000026201	-	98	74.263	Gorilla_gorilla
ENSCPOG00000031638	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSCPOG00000031638	RNPC3	100	93.617	ENSHGLG00000001708	RNPC3	100	93.617	Heterocephalus_glaber_female
ENSCPOG00000031638	RNPC3	100	93.617	ENSHGLG00100003005	RNPC3	100	93.617	Heterocephalus_glaber_male
ENSCPOG00000031638	RNPC3	95	54.076	ENSHCOG00000017135	rnpc3	97	54.076	Hippocampus_comes
ENSCPOG00000031638	RNPC3	95	56.375	ENSIPUG00000002916	rnpc3	97	55.929	Ictalurus_punctatus
ENSCPOG00000031638	RNPC3	100	90.716	ENSSTOG00000025020	RNPC3	100	90.716	Ictidomys_tridecemlineatus
ENSCPOG00000031638	RNPC3	99	85.271	ENSJJAG00000010203	Rnpc3	100	86.240	Jaculus_jaculus
ENSCPOG00000031638	RNPC3	95	54.141	ENSKMAG00000017358	rnpc3	97	53.770	Kryptolebias_marmoratus
ENSCPOG00000031638	RNPC3	95	55.040	ENSLBEG00000024901	rnpc3	95	55.040	Labrus_bergylta
ENSCPOG00000031638	RNPC3	95	62.069	ENSLACG00000005720	RNPC3	90	62.677	Latimeria_chalumnae
ENSCPOG00000031638	RNPC3	95	59.509	ENSLOCG00000007986	rnpc3	96	59.509	Lepisosteus_oculatus
ENSCPOG00000031638	RNPC3	99	87.984	ENSLAFG00000032342	RNPC3	100	87.984	Loxodonta_africana
ENSCPOG00000031638	RNPC3	99	90.680	ENSMFAG00000002004	RNPC3	99	90.680	Macaca_fascicularis
ENSCPOG00000031638	RNPC3	99	65.497	ENSMFAG00000002917	-	99	66.862	Macaca_fascicularis
ENSCPOG00000031638	RNPC3	83	83.256	ENSMMUG00000002098	-	93	83.256	Macaca_mulatta
ENSCPOG00000031638	RNPC3	99	90.680	ENSMMUG00000018039	RNPC3	99	90.680	Macaca_mulatta
ENSCPOG00000031638	RNPC3	99	85.825	ENSMNEG00000033950	RNPC3	99	85.825	Macaca_nemestrina
ENSCPOG00000031638	RNPC3	98	61.614	ENSMNEG00000029209	-	99	65.945	Macaca_nemestrina
ENSCPOG00000031638	RNPC3	98	67.969	ENSMLEG00000034644	-	98	67.969	Mandrillus_leucophaeus
ENSCPOG00000031638	RNPC3	99	90.874	ENSMLEG00000033628	RNPC3	99	90.874	Mandrillus_leucophaeus
ENSCPOG00000031638	RNPC3	95	51.992	ENSMAMG00000007496	rnpc3	97	50.775	Mastacembelus_armatus
ENSCPOG00000031638	RNPC3	95	52.475	ENSMZEG00005020233	rnpc3	97	52.475	Maylandia_zebra
ENSCPOG00000031638	RNPC3	87	71.242	ENSMGAG00000006381	RNPC3	99	71.242	Meleagris_gallopavo
ENSCPOG00000031638	RNPC3	97	89.579	ENSMAUG00000001358	Rnpc3	100	88.372	Mesocricetus_auratus
ENSCPOG00000031638	RNPC3	99	91.860	ENSMICG00000029591	RNPC3	99	91.860	Microcebus_murinus
ENSCPOG00000031638	RNPC3	97	88.800	ENSMOCG00000013423	Rnpc3	98	88.235	Microtus_ochrogaster
ENSCPOG00000031638	RNPC3	95	50.898	ENSMMOG00000005309	rnpc3	97	50.296	Mola_mola
ENSCPOG00000031638	RNPC3	98	76.817	ENSMODG00000002946	RNPC3	99	76.357	Monodelphis_domestica
ENSCPOG00000031638	RNPC3	95	52.789	ENSMALG00000015471	rnpc3	97	52.811	Monopterus_albus
ENSCPOG00000031638	RNPC3	99	86.822	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.426	Mus_caroli
ENSCPOG00000031638	RNPC3	99	87.403	ENSMUSG00000027981	Rnpc3	100	87.403	Mus_musculus
ENSCPOG00000031638	RNPC3	99	87.209	MGP_PahariEiJ_G0027001	Rnpc3	100	87.819	Mus_pahari
ENSCPOG00000031638	RNPC3	99	87.016	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.623	Mus_spretus
ENSCPOG00000031638	RNPC3	100	88.803	ENSMPUG00000007349	RNPC3	100	88.803	Mustela_putorius_furo
ENSCPOG00000031638	RNPC3	100	87.814	ENSMLUG00000028743	RNPC3	100	87.814	Myotis_lucifugus
ENSCPOG00000031638	RNPC3	99	89.453	ENSNGAG00000010939	Rnpc3	99	89.453	Nannospalax_galili
ENSCPOG00000031638	RNPC3	95	52.705	ENSNBRG00000012196	rnpc3	93	53.036	Neolamprologus_brichardi
ENSCPOG00000031638	RNPC3	100	90.909	ENSNLEG00000012013	RNPC3	100	90.909	Nomascus_leucogenys
ENSCPOG00000031638	RNPC3	100	92.456	ENSODEG00000007612	RNPC3	100	92.456	Octodon_degus
ENSCPOG00000031638	RNPC3	95	54.141	ENSONIG00000004770	rnpc3	99	52.250	Oreochromis_niloticus
ENSCPOG00000031638	RNPC3	90	76.824	ENSOANG00000008220	RNPC3	99	77.253	Ornithorhynchus_anatinus
ENSCPOG00000031638	RNPC3	100	89.942	ENSOCUG00000004016	RNPC3	100	89.942	Oryctolagus_cuniculus
ENSCPOG00000031638	RNPC3	95	53.427	ENSORLG00000005694	rnpc3	97	54.527	Oryzias_latipes
ENSCPOG00000031638	RNPC3	95	53.737	ENSORLG00020005513	rnpc3	97	54.839	Oryzias_latipes_hni
ENSCPOG00000031638	RNPC3	95	53.535	ENSORLG00015002179	rnpc3	97	54.637	Oryzias_latipes_hsok
ENSCPOG00000031638	RNPC3	95	54.032	ENSOMEG00000017737	rnpc3	97	55.131	Oryzias_melastigma
ENSCPOG00000031638	RNPC3	100	90.716	ENSOGAG00000026182	RNPC3	100	90.716	Otolemur_garnettii
ENSCPOG00000031638	RNPC3	100	89.942	ENSOARG00000018719	RNPC3	100	89.942	Ovis_aries
ENSCPOG00000031638	RNPC3	100	91.120	ENSPPAG00000037459	RNPC3	100	91.120	Pan_paniscus
ENSCPOG00000031638	RNPC3	100	75.629	ENSPPAG00000030278	-	100	75.629	Pan_paniscus
ENSCPOG00000031638	RNPC3	100	89.961	ENSPPRG00000020246	RNPC3	100	89.961	Panthera_pardus
ENSCPOG00000031638	RNPC3	98	90.551	ENSPTIG00000009887	RNPC3	100	90.551	Panthera_tigris_altaica
ENSCPOG00000031638	RNPC3	100	91.103	ENSPTRG00000033902	RNPC3	100	91.103	Pan_troglodytes
ENSCPOG00000031638	RNPC3	100	74.662	ENSPTRG00000044227	-	100	74.662	Pan_troglodytes
ENSCPOG00000031638	RNPC3	98	71.513	ENSPANG00000029957	-	100	71.316	Papio_anubis
ENSCPOG00000031638	RNPC3	99	90.874	ENSPANG00000012137	RNPC3	99	90.874	Papio_anubis
ENSCPOG00000031638	RNPC3	95	53.479	ENSPKIG00000008828	rnpc3	95	52.456	Paramormyrops_kingsleyae
ENSCPOG00000031638	RNPC3	63	69.578	ENSPSIG00000007396	RNPC3	99	69.277	Pelodiscus_sinensis
ENSCPOG00000031638	RNPC3	93	51.016	ENSPMGG00000011742	rnpc3	95	51.626	Periophthalmus_magnuspinnatus
ENSCPOG00000031638	RNPC3	88	88.184	ENSPEMG00000020112	Rnpc3	100	88.938	Peromyscus_maniculatus_bairdii
ENSCPOG00000031638	RNPC3	96	45.019	ENSPMAG00000003778	rnpc3	98	44.000	Petromyzon_marinus
ENSCPOG00000031638	RNPC3	99	76.744	ENSPCIG00000004415	-	99	76.744	Phascolarctos_cinereus
ENSCPOG00000031638	RNPC3	95	52.314	ENSPFOG00000009895	rnpc3	97	52.008	Poecilia_formosa
ENSCPOG00000031638	RNPC3	95	52.008	ENSPLAG00000012023	rnpc3	97	52.008	Poecilia_latipinna
ENSCPOG00000031638	RNPC3	95	52.515	ENSPMEG00000003663	rnpc3	97	52.209	Poecilia_mexicana
ENSCPOG00000031638	RNPC3	96	51.697	ENSPREG00000010206	rnpc3	97	51.503	Poecilia_reticulata
ENSCPOG00000031638	RNPC3	84	87.097	ENSPPYG00000001102	RNPC3	99	87.097	Pongo_abelii
ENSCPOG00000031638	RNPC3	95	52.705	ENSPNYG00000020603	rnpc3	96	52.705	Pundamilia_nyererei
ENSCPOG00000031638	RNPC3	95	53.906	ENSPNAG00000000524	rnpc3	79	60.256	Pygocentrus_nattereri
ENSCPOG00000031638	RNPC3	99	86.434	ENSRNOG00000017310	Rnpc3	100	86.434	Rattus_norvegicus
ENSCPOG00000031638	RNPC3	99	85.659	ENSRBIG00000043897	RNPC3	99	85.659	Rhinopithecus_bieti
ENSCPOG00000031638	RNPC3	99	91.262	ENSRROG00000032334	RNPC3	99	91.262	Rhinopithecus_roxellana
ENSCPOG00000031638	RNPC3	100	89.942	ENSSBOG00000024473	RNPC3	100	89.942	Saimiri_boliviensis_boliviensis
ENSCPOG00000031638	RNPC3	98	76.621	ENSSHAG00000011859	RNPC3	99	76.163	Sarcophilus_harrisii
ENSCPOG00000031638	RNPC3	96	58.800	ENSSFOG00015013055	rnpc3	99	56.809	Scleropages_formosus
ENSCPOG00000031638	RNPC3	95	50.895	ENSSMAG00000020346	rnpc3	97	50.000	Scophthalmus_maximus
ENSCPOG00000031638	RNPC3	95	54.382	ENSSDUG00000006600	rnpc3	96	54.382	Seriola_dumerili
ENSCPOG00000031638	RNPC3	95	54.582	ENSSLDG00000007979	rnpc3	96	54.582	Seriola_lalandi_dorsalis
ENSCPOG00000031638	RNPC3	95	70.183	ENSSPUG00000008539	-	94	70.385	Sphenodon_punctatus
ENSCPOG00000031638	RNPC3	96	65.000	ENSSPUG00000003872	-	92	65.323	Sphenodon_punctatus
ENSCPOG00000031638	RNPC3	95	54.564	ENSSPAG00000005633	rnpc3	97	54.183	Stegastes_partitus
ENSCPOG00000031638	RNPC3	100	88.975	ENSSSCG00000037254	RNPC3	100	87.234	Sus_scrofa
ENSCPOG00000031638	RNPC3	87	71.302	ENSTGUG00000004795	-	99	70.419	Taeniopygia_guttata
ENSCPOG00000031638	RNPC3	95	53.800	ENSTNIG00000018963	rnpc3	97	53.800	Tetraodon_nigroviridis
ENSCPOG00000031638	RNPC3	98	90.945	ENSUMAG00000007775	RNPC3	100	90.945	Ursus_maritimus
ENSCPOG00000031638	RNPC3	100	89.961	ENSVVUG00000000331	RNPC3	100	89.961	Vulpes_vulpes
ENSCPOG00000031638	RNPC3	97	50.977	ENSXETG00000025027	rnpc3	99	50.977	Xenopus_tropicalis
ENSCPOG00000031638	RNPC3	51	51.880	ENSXCOG00000005013	rnpc3	97	50.969	Xiphophorus_couchianus
ENSCPOG00000031638	RNPC3	95	52.695	ENSXMAG00000006495	rnpc3	97	52.600	Xiphophorus_maculatus