EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000031996 (Gene tree)
Gene ID: 100717479
Gene Symbol: PUM2
Alias: KIAA0235|PUMH2
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 65200 bases
Position: chrDS562873.1:2791682-2856881
Accession: 100717479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	1	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	2	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	3	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	4	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	5	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	6	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	7	8
ENSCPOP00000030172	PUF	PF00806.19	2.2e-73	8	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	1	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	2	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	3	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	4	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	5	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	6	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	7	8
ENSCPOP00000021559	PUF	PF00806.19	4.5e-73	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000037768	PUM2-201	6305	XM_003473049	ENSCPOP00000021559	1068 (aa)	XP_003473097	A0A286X824
ENSCPOT00000041441	PUM2-202	6068	XM_003473050	ENSCPOP00000030172	989 (aa)	XP_003473098	A0A286XXW5

Gene Model

Click here to download ENSCPOG00000031996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000031996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000031996	PUM2	100	87.923	ENSCPOG00000031613	PUM1	86	86.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000031996	PUM2	100	97.753	ENSG00000055917	PUM2	100	100.000	Homo_sapiens
ENSCPOG00000031996	PUM2	89	91.198	ENSAPOG00000015756	pum2	100	75.724	Acanthochromis_polyacanthus
ENSCPOG00000031996	PUM2	100	97.944	ENSAMEG00000002823	PUM2	100	97.944	Ailuropoda_melanoleuca
ENSCPOG00000031996	PUM2	90	85.863	ENSACIG00000010646	pum2	98	84.330	Amphilophus_citrinellus
ENSCPOG00000031996	PUM2	98	73.108	ENSAOCG00000016619	pum2	87	76.278	Amphiprion_ocellaris
ENSCPOG00000031996	PUM2	89	91.198	ENSAPEG00000019924	pum2	100	77.545	Amphiprion_percula
ENSCPOG00000031996	PUM2	100	75.185	ENSATEG00000015030	pum2	90	77.306	Anabas_testudineus
ENSCPOG00000031996	PUM2	100	92.142	ENSAPLG00000010496	PUM2	90	92.142	Anas_platyrhynchos
ENSCPOG00000031996	PUM2	100	91.487	ENSACAG00000010491	PUM2	100	91.674	Anolis_carolinensis
ENSCPOG00000031996	PUM2	100	97.659	ENSANAG00000021807	PUM2	100	97.659	Aotus_nancymaae
ENSCPOG00000031996	PUM2	100	75.046	ENSACLG00000022532	pum2	89	77.164	Astatotilapia_calliptera
ENSCPOG00000031996	PUM2	100	97.753	ENSBTAG00000011155	PUM2	100	97.753	Bos_taurus
ENSCPOG00000031996	PUM2	100	97.659	ENSCJAG00000007450	PUM2	100	97.659	Callithrix_jacchus
ENSCPOG00000031996	PUM2	100	98.034	ENSCAFG00000003839	PUM2	100	98.034	Canis_familiaris
ENSCPOG00000031996	PUM2	100	96.636	ENSCAFG00020025689	PUM2	100	96.636	Canis_lupus_dingo
ENSCPOG00000031996	PUM2	100	97.846	ENSCHIG00000022180	PUM2	100	97.846	Capra_hircus
ENSCPOG00000031996	PUM2	100	97.753	ENSTSYG00000014463	PUM2	100	97.753	Carlito_syrichta
ENSCPOG00000031996	PUM2	100	83.620	ENSCAPG00000016888	PUM2	96	99.583	Cavia_aperea
ENSCPOG00000031996	PUM2	100	97.753	ENSCCAG00000037035	PUM2	100	97.753	Cebus_capucinus
ENSCPOG00000031996	PUM2	100	97.753	ENSCATG00000043826	PUM2	100	97.753	Cercocebus_atys
ENSCPOG00000031996	PUM2	100	98.689	ENSCLAG00000006048	PUM2	100	98.689	Chinchilla_lanigera
ENSCPOG00000031996	PUM2	100	97.753	ENSCSAG00000008087	PUM2	100	97.753	Chlorocebus_sabaeus
ENSCPOG00000031996	PUM2	86	100.000	ENSCHOG00000004575	PUM2	86	100.000	Choloepus_hoffmanni
ENSCPOG00000031996	PUM2	100	91.818	ENSCPBG00000019966	PUM2	100	91.515	Chrysemys_picta_bellii
ENSCPOG00000031996	PUM2	100	97.659	ENSCANG00000032797	PUM2	100	97.659	Colobus_angolensis_palliatus
ENSCPOG00000031996	PUM2	100	97.097	ENSCGRG00001025023	Pum2	100	97.097	Cricetulus_griseus_chok1gshd
ENSCPOG00000031996	PUM2	100	97.097	ENSCGRG00000001580	Pum2	100	97.097	Cricetulus_griseus_crigri
ENSCPOG00000031996	PUM2	97	84.257	ENSCSEG00000020899	pum2	90	75.945	Cynoglossus_semilaevis
ENSCPOG00000031996	PUM2	100	73.573	ENSCVAG00000002426	pum2	96	85.965	Cyprinodon_variegatus
ENSCPOG00000031996	PUM2	100	75.115	ENSDARG00000061040	pum2	83	90.821	Danio_rerio
ENSCPOG00000031996	PUM2	98	96.259	ENSDNOG00000006733	PUM2	100	96.259	Dasypus_novemcinctus
ENSCPOG00000031996	PUM2	100	91.698	ENSDORG00000011453	Pum2	100	91.974	Dipodomys_ordii
ENSCPOG00000031996	PUM2	87	98.577	ENSETEG00000017683	PUM2	85	98.577	Echinops_telfairi
ENSCPOG00000031996	PUM2	68	72.273	ENSEBUG00000014828	pum2	93	62.484	Eptatretus_burgeri
ENSCPOG00000031996	PUM2	96	66.342	ENSEBUG00000004435	pum2	92	85.071	Eptatretus_burgeri
ENSCPOG00000031996	PUM2	100	97.846	ENSEASG00005009429	PUM2	100	97.846	Equus_asinus_asinus
ENSCPOG00000031996	PUM2	100	97.846	ENSECAG00000021930	PUM2	100	97.846	Equus_caballus
ENSCPOG00000031996	PUM2	77	98.113	ENSEEUG00000003224	-	80	91.388	Erinaceus_europaeus
ENSCPOG00000031996	PUM2	100	72.303	ENSELUG00000014997	pum2	90	74.863	Esox_lucius
ENSCPOG00000031996	PUM2	100	97.846	ENSFCAG00000027520	PUM2	100	97.846	Felis_catus
ENSCPOG00000031996	PUM2	100	92.891	ENSFALG00000001759	PUM2	100	92.891	Ficedula_albicollis
ENSCPOG00000031996	PUM2	100	97.287	ENSFDAG00000019685	PUM2	100	97.287	Fukomys_damarensis
ENSCPOG00000031996	PUM2	96	91.443	ENSFHEG00000021596	pum2	100	81.933	Fundulus_heteroclitus
ENSCPOG00000031996	PUM2	100	70.631	ENSGMOG00000006903	pum2	100	73.651	Gadus_morhua
ENSCPOG00000031996	PUM2	100	92.516	ENSGALG00000016481	PUM2	100	92.516	Gallus_gallus
ENSCPOG00000031996	PUM2	96	91.463	ENSGAFG00000013691	pum2	100	77.246	Gambusia_affinis
ENSCPOG00000031996	PUM2	100	73.641	ENSGACG00000009670	pum2	100	74.908	Gasterosteus_aculeatus
ENSCPOG00000031996	PUM2	100	92.703	ENSGAGG00000020698	PUM2	100	92.423	Gopherus_agassizii
ENSCPOG00000031996	PUM2	100	97.940	ENSGGOG00000011374	PUM2	100	97.940	Gorilla_gorilla
ENSCPOG00000031996	PUM2	95	86.076	ENSHBUG00000016453	pum2	90	71.094	Haplochromis_burtoni
ENSCPOG00000031996	PUM2	100	95.506	ENSHGLG00000007892	PUM2	100	95.599	Heterocephalus_glaber_female
ENSCPOG00000031996	PUM2	100	95.051	ENSHGLG00100015510	PUM2	100	94.958	Heterocephalus_glaber_male
ENSCPOG00000031996	PUM2	99	91.443	ENSHCOG00000010119	pum2	85	85.965	Hippocampus_comes
ENSCPOG00000031996	PUM2	100	98.034	ENSSTOG00000006262	PUM2	100	98.034	Ictidomys_tridecemlineatus
ENSCPOG00000031996	PUM2	100	97.290	ENSJJAG00000020969	Pum2	100	97.290	Jaculus_jaculus
ENSCPOG00000031996	PUM2	100	81.174	ENSKMAG00000017216	pum2	100	73.529	Kryptolebias_marmoratus
ENSCPOG00000031996	PUM2	96	90.998	ENSLBEG00000020488	pum2	87	85.590	Labrus_bergylta
ENSCPOG00000031996	PUM2	100	88.920	ENSLACG00000008723	PUM2	89	89.851	Latimeria_chalumnae
ENSCPOG00000031996	PUM2	100	86.236	ENSLOCG00000017196	pum2	89	86.236	Lepisosteus_oculatus
ENSCPOG00000031996	PUM2	100	97.290	ENSLAFG00000009278	PUM2	100	97.290	Loxodonta_africana
ENSCPOG00000031996	PUM2	100	97.753	ENSMFAG00000000492	PUM2	100	97.753	Macaca_fascicularis
ENSCPOG00000031996	PUM2	100	97.753	ENSMMUG00000023181	PUM2	100	97.753	Macaca_mulatta
ENSCPOG00000031996	PUM2	100	97.753	ENSMNEG00000039659	PUM2	100	97.753	Macaca_nemestrina
ENSCPOG00000031996	PUM2	100	97.753	ENSMLEG00000039243	PUM2	100	97.753	Mandrillus_leucophaeus
ENSCPOG00000031996	PUM2	100	74.977	ENSMAMG00000006121	pum2	90	77.378	Mastacembelus_armatus
ENSCPOG00000031996	PUM2	100	75.185	ENSMZEG00005000791	pum2	89	77.306	Maylandia_zebra
ENSCPOG00000031996	PUM2	100	92.516	ENSMGAG00000014040	PUM2	100	92.516	Meleagris_gallopavo
ENSCPOG00000031996	PUM2	100	97.103	ENSMAUG00000000311	Pum2	100	97.103	Mesocricetus_auratus
ENSCPOG00000031996	PUM2	100	98.408	ENSMICG00000011647	PUM2	100	98.408	Microcebus_murinus
ENSCPOG00000031996	PUM2	100	96.916	ENSMOCG00000013663	Pum2	100	96.916	Microtus_ochrogaster
ENSCPOG00000031996	PUM2	100	74.217	ENSMMOG00000002975	pum2	100	75.691	Mola_mola
ENSCPOG00000031996	PUM2	100	90.884	ENSMODG00000009811	PUM2	100	90.605	Monodelphis_domestica
ENSCPOG00000031996	PUM2	91	90.954	ENSMALG00000022313	pum2	100	82.143	Monopterus_albus
ENSCPOG00000031996	PUM2	100	97.004	MGP_CAROLIEiJ_G0017603	Pum2	99	98.778	Mus_caroli
ENSCPOG00000031996	PUM2	100	97.097	ENSMUSG00000020594	Pum2	99	99.022	Mus_musculus
ENSCPOG00000031996	PUM2	100	97.378	MGP_PahariEiJ_G0029361	Pum2	99	99.267	Mus_pahari
ENSCPOG00000031996	PUM2	100	97.097	MGP_SPRETEiJ_G0018447	Pum2	99	99.022	Mus_spretus
ENSCPOG00000031996	PUM2	100	98.221	ENSMPUG00000013734	PUM2	100	98.221	Mustela_putorius_furo
ENSCPOG00000031996	PUM2	100	97.287	ENSMLUG00000007362	PUM2	100	97.287	Myotis_lucifugus
ENSCPOG00000031996	PUM2	100	96.916	ENSNGAG00000016665	-	100	96.916	Nannospalax_galili
ENSCPOG00000031996	PUM2	99	66.078	ENSNGAG00000016239	-	75	71.988	Nannospalax_galili
ENSCPOG00000031996	PUM2	100	66.748	ENSNBRG00000020737	pum2	100	67.398	Neolamprologus_brichardi
ENSCPOG00000031996	PUM2	100	97.753	ENSNLEG00000002509	PUM2	99	99.267	Nomascus_leucogenys
ENSCPOG00000031996	PUM2	93	90.808	ENSMEUG00000016567	PUM2	93	89.859	Notamacropus_eugenii
ENSCPOG00000031996	PUM2	82	76.818	ENSOPRG00000001963	PUM2	88	89.542	Ochotona_princeps
ENSCPOG00000031996	PUM2	100	97.850	ENSODEG00000007823	PUM2	100	97.850	Octodon_degus
ENSCPOG00000031996	PUM2	100	75.277	ENSONIG00000006119	pum2	90	77.399	Oreochromis_niloticus
ENSCPOG00000031996	PUM2	100	97.940	ENSOCUG00000017908	PUM2	100	97.940	Oryctolagus_cuniculus
ENSCPOG00000031996	PUM2	90	90.931	ENSORLG00000012611	pum2	100	75.449	Oryzias_latipes
ENSCPOG00000031996	PUM2	91	90.931	ENSORLG00020014452	pum2	100	75.349	Oryzias_latipes_hni
ENSCPOG00000031996	PUM2	100	74.170	ENSORLG00015009427	pum2	90	74.931	Oryzias_latipes_hsok
ENSCPOG00000031996	PUM2	95	83.403	ENSOMEG00000005889	pum2	100	75.556	Oryzias_melastigma
ENSCPOG00000031996	PUM2	98	97.571	ENSOGAG00000002187	PUM2	100	97.571	Otolemur_garnettii
ENSCPOG00000031996	PUM2	100	97.664	ENSOARG00000017236	PUM2	100	97.664	Ovis_aries
ENSCPOG00000031996	PUM2	100	97.940	ENSPPAG00000023095	PUM2	100	97.940	Pan_paniscus
ENSCPOG00000031996	PUM2	100	97.846	ENSPPRG00000021443	PUM2	100	97.846	Panthera_pardus
ENSCPOG00000031996	PUM2	100	97.846	ENSPTIG00000018982	PUM2	100	97.846	Panthera_tigris_altaica
ENSCPOG00000031996	PUM2	100	97.940	ENSPTRG00000011692	PUM2	100	97.940	Pan_troglodytes
ENSCPOG00000031996	PUM2	100	86.401	ENSPANG00000009393	PUM2	100	100.000	Papio_anubis
ENSCPOG00000031996	PUM2	100	74.880	ENSPKIG00000023195	pum2	99	82.927	Paramormyrops_kingsleyae
ENSCPOG00000031996	PUM2	100	92.423	ENSPSIG00000011626	PUM2	88	92.423	Pelodiscus_sinensis
ENSCPOG00000031996	PUM2	96	90.709	ENSPMGG00000016123	pum2	100	81.723	Periophthalmus_magnuspinnatus
ENSCPOG00000031996	PUM2	100	96.822	ENSPEMG00000008357	Pum2	100	96.822	Peromyscus_maniculatus_bairdii
ENSCPOG00000031996	PUM2	100	68.349	ENSPMAG00000007038	pum2	95	79.425	Petromyzon_marinus
ENSCPOG00000031996	PUM2	100	90.553	ENSPCIG00000022139	PUM2	100	89.674	Phascolarctos_cinereus
ENSCPOG00000031996	PUM2	100	72.834	ENSPFOG00000019208	pum2	90	75.564	Poecilia_formosa
ENSCPOG00000031996	PUM2	96	91.463	ENSPLAG00000001826	pum2	100	77.445	Poecilia_latipinna
ENSCPOG00000031996	PUM2	100	74.446	ENSPMEG00000015766	pum2	90	77.235	Poecilia_mexicana
ENSCPOG00000031996	PUM2	91	91.220	ENSPREG00000006905	pum2	100	77.069	Poecilia_reticulata
ENSCPOG00000031996	PUM2	100	97.940	ENSPPYG00000012617	PUM2	100	97.940	Pongo_abelii
ENSCPOG00000031996	PUM2	76	100.000	ENSPCAG00000008001	PUM2	70	100.000	Procavia_capensis
ENSCPOG00000031996	PUM2	99	98.154	ENSPCOG00000019636	PUM2	100	98.154	Propithecus_coquereli
ENSCPOG00000031996	PUM2	98	92.308	ENSPVAG00000002920	PUM2	98	94.885	Pteropus_vampyrus
ENSCPOG00000031996	PUM2	100	75.046	ENSPNYG00000022901	pum2	89	77.164	Pundamilia_nyererei
ENSCPOG00000031996	PUM2	98	75.502	ENSPNAG00000008025	pum2	100	76.107	Pygocentrus_nattereri
ENSCPOG00000031996	PUM2	100	97.068	ENSRNOG00000006180	Pum2	99	98.778	Rattus_norvegicus
ENSCPOG00000031996	PUM2	100	97.659	ENSRBIG00000044880	PUM2	100	97.659	Rhinopithecus_bieti
ENSCPOG00000031996	PUM2	100	97.846	ENSSBOG00000022007	PUM2	100	97.846	Saimiri_boliviensis_boliviensis
ENSCPOG00000031996	PUM2	100	89.309	ENSSHAG00000002778	PUM2	100	89.309	Sarcophilus_harrisii
ENSCPOG00000031996	PUM2	87	86.985	ENSSFOG00015003476	pum2	84	87.852	Scleropages_formosus
ENSCPOG00000031996	PUM2	100	73.229	ENSSMAG00000018236	pum2	100	67.739	Scophthalmus_maximus
ENSCPOG00000031996	PUM2	89	74.330	ENSSDUG00000001800	pum2	87	77.320	Seriola_dumerili
ENSCPOG00000031996	PUM2	100	73.941	ENSSLDG00000000981	pum2	90	77.001	Seriola_lalandi_dorsalis
ENSCPOG00000031996	PUM2	96	89.217	ENSSARG00000010992	PUM2	86	89.103	Sorex_araneus
ENSCPOG00000031996	PUM2	99	92.823	ENSSPUG00000017012	PUM2	99	92.068	Sphenodon_punctatus
ENSCPOG00000031996	PUM2	89	91.198	ENSSPAG00000022948	pum2	100	77.445	Stegastes_partitus
ENSCPOG00000031996	PUM2	99	99.272	ENSSSCG00000008600	PUM2	100	97.566	Sus_scrofa
ENSCPOG00000031996	PUM2	100	92.891	ENSTGUG00000013149	PUM2	100	92.891	Taeniopygia_guttata
ENSCPOG00000031996	PUM2	100	72.442	ENSTRUG00000018167	pum2	90	72.635	Takifugu_rubripes
ENSCPOG00000031996	PUM2	100	74.194	ENSTNIG00000003116	pum2	90	76.221	Tetraodon_nigroviridis
ENSCPOG00000031996	PUM2	85	98.577	ENSTBEG00000008729	PUM2	86	98.577	Tupaia_belangeri
ENSCPOG00000031996	PUM2	100	97.196	ENSTTRG00000004887	PUM2	100	97.196	Tursiops_truncatus
ENSCPOG00000031996	PUM2	72	97.809	ENSUAMG00000008120	PUM2	98	97.842	Ursus_americanus
ENSCPOG00000031996	PUM2	100	98.221	ENSUMAG00000023198	PUM2	100	98.221	Ursus_maritimus
ENSCPOG00000031996	PUM2	100	97.664	ENSVPAG00000005056	PUM2	100	97.664	Vicugna_pacos
ENSCPOG00000031996	PUM2	100	98.127	ENSVVUG00000014829	PUM2	100	98.127	Vulpes_vulpes
ENSCPOG00000031996	PUM2	100	80.204	ENSXETG00000008903	pum2	90	80.576	Xenopus_tropicalis
ENSCPOG00000031996	PUM2	89	74.277	ENSXCOG00000002556	pum2	87	77.399	Xiphophorus_couchianus
ENSCPOG00000031996	PUM2	96	91.463	ENSXMAG00000017682	pum2	100	77.345	Xiphophorus_maculatus