EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000032527 (Gene tree)
Gene ID: 100720468
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 68411 bases
Position: chrDS562861.1:60829648-60898058
Accession: 100720468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023995	RNase_H2-Ydr279	PF09468.10	4.4e-15	1	1
ENSCPOP00000008124	RNase_H2-Ydr279	PF09468.10	5.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009126	RNASEH2B-202	2357	XM_003477328	ENSCPOP00000008124	310 (aa)	XP_003477376	H0VDQ9
ENSCPOT00000043813	RNASEH2B-201	5283	XM_013141152	ENSCPOP00000023995	254 (aa)	XP_012996606	A0A286XF11

Gene Model

Click here to download ENSCPOG00000032527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000032527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000032527	RNASEH2B	100	84.252	ENSG00000136104	RNASEH2B	100	85.393	Homo_sapiens
ENSCPOG00000032527	RNASEH2B	89	49.281	ENSAPOG00000010496	rnaseh2b	90	49.281	Acanthochromis_polyacanthus
ENSCPOG00000032527	RNASEH2B	94	80.546	ENSAMEG00000012040	RNASEH2B	99	80.546	Ailuropoda_melanoleuca
ENSCPOG00000032527	RNASEH2B	83	46.124	ENSACIG00000021991	rnaseh2b	95	47.500	Amphilophus_citrinellus
ENSCPOG00000032527	RNASEH2B	89	48.201	ENSAOCG00000013398	rnaseh2b	90	48.201	Amphiprion_ocellaris
ENSCPOG00000032527	RNASEH2B	89	48.201	ENSAPEG00000006033	rnaseh2b	90	48.201	Amphiprion_percula
ENSCPOG00000032527	RNASEH2B	88	50.916	ENSATEG00000008370	rnaseh2b	89	50.916	Anabas_testudineus
ENSCPOG00000032527	RNASEH2B	83	60.465	ENSAPLG00000008955	RNASEH2B	99	60.370	Anas_platyrhynchos
ENSCPOG00000032527	RNASEH2B	92	55.556	ENSACAG00000011679	RNASEH2B	97	55.556	Anolis_carolinensis
ENSCPOG00000032527	RNASEH2B	100	83.465	ENSANAG00000020662	RNASEH2B	96	84.228	Aotus_nancymaae
ENSCPOG00000032527	RNASEH2B	87	48.148	ENSACLG00000000467	rnaseh2b	88	48.148	Astatotilapia_calliptera
ENSCPOG00000032527	RNASEH2B	87	52.222	ENSAMXG00000014351	rnaseh2b	88	52.222	Astyanax_mexicanus
ENSCPOG00000032527	RNASEH2B	99	78.641	ENSBTAG00000020149	RNASEH2B	95	80.000	Bos_taurus
ENSCPOG00000032527	RNASEH2B	96	80.738	ENSCJAG00000003822	-	87	81.702	Callithrix_jacchus
ENSCPOG00000032527	RNASEH2B	100	82.101	ENSCJAG00000008585	-	96	83.793	Callithrix_jacchus
ENSCPOG00000032527	RNASEH2B	95	79.322	ENSCAFG00000004295	RNASEH2B	93	79.720	Canis_familiaris
ENSCPOG00000032527	RNASEH2B	98	80.000	ENSCAFG00020000250	RNASEH2B	97	80.872	Canis_lupus_dingo
ENSCPOG00000032527	RNASEH2B	99	81.046	ENSCHIG00000018220	RNASEH2B	95	82.534	Capra_hircus
ENSCPOG00000032527	RNASEH2B	77	69.456	ENSCHIG00000012982	-	84	69.456	Capra_hircus
ENSCPOG00000032527	RNASEH2B	95	71.284	ENSTSYG00000031177	-	96	71.575	Carlito_syrichta
ENSCPOG00000032527	RNASEH2B	95	81.911	ENSTSYG00000009176	-	95	81.911	Carlito_syrichta
ENSCPOG00000032527	RNASEH2B	93	90.657	ENSCAPG00000009978	RNASEH2B	97	91.034	Cavia_aperea
ENSCPOG00000032527	RNASEH2B	100	83.658	ENSCCAG00000026979	RNASEH2B	96	85.185	Cebus_capucinus
ENSCPOG00000032527	RNASEH2B	96	83.197	ENSCATG00000031336	RNASEH2B	80	84.043	Cercocebus_atys
ENSCPOG00000032527	RNASEH2B	96	88.255	ENSCLAG00000003517	RNASEH2B	79	89.965	Chinchilla_lanigera
ENSCPOG00000032527	RNASEH2B	100	79.553	ENSCSAG00000017701	RNASEH2B	91	81.063	Chlorocebus_sabaeus
ENSCPOG00000032527	RNASEH2B	97	66.340	ENSCHOG00000013688	RNASEH2B	95	67.230	Choloepus_hoffmanni
ENSCPOG00000032527	RNASEH2B	94	58.020	ENSCPBG00000008684	RNASEH2B	90	58.020	Chrysemys_picta_bellii
ENSCPOG00000032527	RNASEH2B	94	35.948	ENSCING00000016454	-	96	35.621	Ciona_intestinalis
ENSCPOG00000032527	RNASEH2B	100	82.101	ENSCANG00000041511	-	95	84.082	Colobus_angolensis_palliatus
ENSCPOG00000032527	RNASEH2B	98	79.344	ENSCGRG00001000611	Rnaseh2b	95	80.612	Cricetulus_griseus_chok1gshd
ENSCPOG00000032527	RNASEH2B	98	79.344	ENSCGRG00000006077	Rnaseh2b	95	80.612	Cricetulus_griseus_crigri
ENSCPOG00000032527	RNASEH2B	86	50.370	ENSCSEG00000004910	rnaseh2b	90	50.193	Cynoglossus_semilaevis
ENSCPOG00000032527	RNASEH2B	89	46.403	ENSCVAG00000005212	rnaseh2b	87	47.212	Cyprinodon_variegatus
ENSCPOG00000032527	RNASEH2B	94	48.454	ENSDARG00000005128	rnaseh2b	94	48.454	Danio_rerio
ENSCPOG00000032527	RNASEH2B	93	72.917	ENSDNOG00000049666	-	93	72.917	Dasypus_novemcinctus
ENSCPOG00000032527	RNASEH2B	97	72.039	ENSDNOG00000034290	-	95	73.288	Dasypus_novemcinctus
ENSCPOG00000032527	RNASEH2B	100	79.355	ENSDORG00000010708	Rnaseh2b	96	80.872	Dipodomys_ordii
ENSCPOG00000032527	RNASEH2B	82	40.698	ENSEBUG00000005965	rnaseh2b	97	41.473	Eptatretus_burgeri
ENSCPOG00000032527	RNASEH2B	100	84.194	ENSEASG00005017323	RNASEH2B	96	85.570	Equus_asinus_asinus
ENSCPOG00000032527	RNASEH2B	100	85.039	ENSECAG00000014262	RNASEH2B	96	85.906	Equus_caballus
ENSCPOG00000032527	RNASEH2B	90	48.214	ENSELUG00000019560	rnaseh2b	91	48.214	Esox_lucius
ENSCPOG00000032527	RNASEH2B	94	83.193	ENSFCAG00000014257	RNASEH2B	88	83.688	Felis_catus
ENSCPOG00000032527	RNASEH2B	90	57.857	ENSFALG00000008435	RNASEH2B	95	57.857	Ficedula_albicollis
ENSCPOG00000032527	RNASEH2B	93	87.847	ENSFDAG00000009920	RNASEH2B	100	87.847	Fukomys_damarensis
ENSCPOG00000032527	RNASEH2B	86	49.071	ENSFHEG00000012160	rnaseh2b	87	49.071	Fundulus_heteroclitus
ENSCPOG00000032527	RNASEH2B	83	47.348	ENSGMOG00000016830	rnaseh2b	91	47.348	Gadus_morhua
ENSCPOG00000032527	RNASEH2B	96	55.691	ENSGALG00000017015	RNASEH2B	94	57.877	Gallus_gallus
ENSCPOG00000032527	RNASEH2B	86	49.071	ENSGAFG00000021222	rnaseh2b	87	49.071	Gambusia_affinis
ENSCPOG00000032527	RNASEH2B	89	47.535	ENSGACG00000002821	rnaseh2b	90	47.535	Gasterosteus_aculeatus
ENSCPOG00000032527	RNASEH2B	87	60.294	ENSGAGG00000014722	RNASEH2B	97	60.294	Gopherus_agassizii
ENSCPOG00000032527	RNASEH2B	100	83.268	ENSGGOG00000001044	RNASEH2B	95	84.898	Gorilla_gorilla
ENSCPOG00000032527	RNASEH2B	87	48.519	ENSHBUG00000006049	rnaseh2b	89	49.225	Haplochromis_burtoni
ENSCPOG00000032527	RNASEH2B	93	89.965	ENSHGLG00100015953	RNASEH2B	98	89.965	Heterocephalus_glaber_male
ENSCPOG00000032527	RNASEH2B	86	46.667	ENSHCOG00000003318	rnaseh2b	86	50.000	Hippocampus_comes
ENSCPOG00000032527	RNASEH2B	88	50.916	ENSIPUG00000023815	rnaseh2b	88	50.916	Ictalurus_punctatus
ENSCPOG00000032527	RNASEH2B	92	85.263	ENSSTOG00000015126	RNASEH2B	97	85.263	Ictidomys_tridecemlineatus
ENSCPOG00000032527	RNASEH2B	94	80.756	ENSJJAG00000013335	Rnaseh2b	97	80.756	Jaculus_jaculus
ENSCPOG00000032527	RNASEH2B	89	49.281	ENSKMAG00000002198	rnaseh2b	90	49.281	Kryptolebias_marmoratus
ENSCPOG00000032527	RNASEH2B	89	50.360	ENSLBEG00000019331	rnaseh2b	90	50.360	Labrus_bergylta
ENSCPOG00000032527	RNASEH2B	68	57.075	ENSLACG00000010782	RNASEH2B	90	57.589	Latimeria_chalumnae
ENSCPOG00000032527	RNASEH2B	94	51.877	ENSLOCG00000009296	rnaseh2b	95	51.877	Lepisosteus_oculatus
ENSCPOG00000032527	RNASEH2B	94	79.522	ENSLAFG00000030158	RNASEH2B	94	79.522	Loxodonta_africana
ENSCPOG00000032527	RNASEH2B	100	82.258	ENSMFAG00000038464	-	96	83.557	Macaca_fascicularis
ENSCPOG00000032527	RNASEH2B	100	83.858	ENSMMUG00000021746	RNASEH2B	95	85.537	Macaca_mulatta
ENSCPOG00000032527	RNASEH2B	100	82.258	ENSMNEG00000030580	RNASEH2B	96	83.557	Macaca_nemestrina
ENSCPOG00000032527	RNASEH2B	100	82.879	ENSMLEG00000043911	-	95	84.490	Mandrillus_leucophaeus
ENSCPOG00000032527	RNASEH2B	86	49.814	ENSMAMG00000017109	rnaseh2b	87	49.814	Mastacembelus_armatus
ENSCPOG00000032527	RNASEH2B	85	48.485	ENSMZEG00005021926	rnaseh2b	87	48.120	Maylandia_zebra
ENSCPOG00000032527	RNASEH2B	92	55.983	ENSMGAG00000015025	RNASEH2B	99	57.544	Meleagris_gallopavo
ENSCPOG00000032527	RNASEH2B	98	78.361	ENSMAUG00000016520	Rnaseh2b	95	79.252	Mesocricetus_auratus
ENSCPOG00000032527	RNASEH2B	98	82.623	ENSMICG00000000528	RNASEH2B	95	83.959	Microcebus_murinus
ENSCPOG00000032527	RNASEH2B	86	50.186	ENSMMOG00000019799	rnaseh2b	93	50.186	Mola_mola
ENSCPOG00000032527	RNASEH2B	94	62.543	ENSMODG00000010775	RNASEH2B	95	62.543	Monodelphis_domestica
ENSCPOG00000032527	RNASEH2B	89	48.201	ENSMALG00000004463	rnaseh2b	89	48.718	Monopterus_albus
ENSCPOG00000032527	RNASEH2B	97	68.750	MGP_CAROLIEiJ_G0019389	Rnaseh2b	95	69.153	Mus_caroli
ENSCPOG00000032527	RNASEH2B	97	78.618	ENSMUSG00000021932	Rnaseh2b	95	79.661	Mus_musculus
ENSCPOG00000032527	RNASEH2B	97	61.919	MGP_PahariEiJ_G0030407	-	73	82.292	Mus_pahari
ENSCPOG00000032527	RNASEH2B	92	83.691	ENSMPUG00000018010	RNASEH2B	98	83.691	Mustela_putorius_furo
ENSCPOG00000032527	RNASEH2B	99	81.553	ENSMLUG00000004065	-	96	83.502	Myotis_lucifugus
ENSCPOG00000032527	RNASEH2B	87	48.148	ENSNBRG00000003253	rnaseh2b	89	47.970	Neolamprologus_brichardi
ENSCPOG00000032527	RNASEH2B	100	82.879	ENSNLEG00000003804	RNASEH2B	95	84.898	Nomascus_leucogenys
ENSCPOG00000032527	RNASEH2B	92	61.458	ENSMEUG00000003665	RNASEH2B	99	61.458	Notamacropus_eugenii
ENSCPOG00000032527	RNASEH2B	51	79.874	ENSOPRG00000003695	-	78	60.887	Ochotona_princeps
ENSCPOG00000032527	RNASEH2B	99	86.645	ENSODEG00000006793	-	97	86.667	Octodon_degus
ENSCPOG00000032527	RNASEH2B	84	78.972	ENSODEG00000005412	-	95	79.167	Octodon_degus
ENSCPOG00000032527	RNASEH2B	87	47.407	ENSONIG00000006657	rnaseh2b	88	47.407	Oreochromis_niloticus
ENSCPOG00000032527	RNASEH2B	91	61.672	ENSOANG00000015537	RNASEH2B	99	61.672	Ornithorhynchus_anatinus
ENSCPOG00000032527	RNASEH2B	99	79.739	ENSOCUG00000008904	RNASEH2B	92	81.570	Oryctolagus_cuniculus
ENSCPOG00000032527	RNASEH2B	93	48.097	ENSORLG00000011850	rnaseh2b	95	48.097	Oryzias_latipes
ENSCPOG00000032527	RNASEH2B	93	48.789	ENSORLG00020012081	rnaseh2b	95	48.789	Oryzias_latipes_hni
ENSCPOG00000032527	RNASEH2B	93	48.789	ENSORLG00015015468	rnaseh2b	95	48.789	Oryzias_latipes_hsok
ENSCPOG00000032527	RNASEH2B	93	47.751	ENSOMEG00000012441	rnaseh2b	95	47.405	Oryzias_melastigma
ENSCPOG00000032527	RNASEH2B	95	79.599	ENSOGAG00000016486	RNASEH2B	100	79.599	Otolemur_garnettii
ENSCPOG00000032527	RNASEH2B	95	80.205	ENSOARG00000008701	RNASEH2B	99	80.205	Ovis_aries
ENSCPOG00000032527	RNASEH2B	90	83.333	ENSPPAG00000026374	RNASEH2B	100	84.581	Pan_paniscus
ENSCPOG00000032527	RNASEH2B	97	81.250	ENSPPRG00000012450	RNASEH2B	97	82.215	Panthera_pardus
ENSCPOG00000032527	RNASEH2B	89	81.786	ENSPTIG00000013918	RNASEH2B	99	81.786	Panthera_tigris_altaica
ENSCPOG00000032527	RNASEH2B	100	83.658	ENSPTRG00000005886	RNASEH2B	98	83.871	Pan_troglodytes
ENSCPOG00000032527	RNASEH2B	100	82.879	ENSPANG00000022424	-	95	84.082	Papio_anubis
ENSCPOG00000032527	RNASEH2B	90	46.237	ENSPKIG00000013386	rnaseh2b	90	46.237	Paramormyrops_kingsleyae
ENSCPOG00000032527	RNASEH2B	73	56.452	ENSPSIG00000002224	RNASEH2B	86	56.452	Pelodiscus_sinensis
ENSCPOG00000032527	RNASEH2B	65	50.246	ENSPMGG00000010299	rnaseh2b	98	50.246	Periophthalmus_magnuspinnatus
ENSCPOG00000032527	RNASEH2B	98	78.689	ENSPEMG00000019721	Rnaseh2b	95	79.932	Peromyscus_maniculatus_bairdii
ENSCPOG00000032527	RNASEH2B	91	60.606	ENSPCIG00000014535	-	91	59.341	Phascolarctos_cinereus
ENSCPOG00000032527	RNASEH2B	86	49.815	ENSPFOG00000016722	rnaseh2b	87	49.815	Poecilia_formosa
ENSCPOG00000032527	RNASEH2B	86	50.186	ENSPLAG00000011755	rnaseh2b	87	50.186	Poecilia_latipinna
ENSCPOG00000032527	RNASEH2B	86	50.186	ENSPMEG00000002721	rnaseh2b	87	50.186	Poecilia_mexicana
ENSCPOG00000032527	RNASEH2B	86	50.186	ENSPREG00000007737	rnaseh2b	87	50.186	Poecilia_reticulata
ENSCPOG00000032527	RNASEH2B	100	82.428	ENSPPYG00000005378	RNASEH2B	96	82.060	Pongo_abelii
ENSCPOG00000032527	RNASEH2B	100	84.314	ENSPCOG00000026623	RNASEH2B	95	86.008	Propithecus_coquereli
ENSCPOG00000032527	RNASEH2B	88	84.513	ENSPVAG00000000508	RNASEH2B	95	83.399	Pteropus_vampyrus
ENSCPOG00000032527	RNASEH2B	87	48.519	ENSPNYG00000013552	rnaseh2b	89	49.225	Pundamilia_nyererei
ENSCPOG00000032527	RNASEH2B	87	49.446	ENSPNAG00000024825	rnaseh2b	88	49.446	Pygocentrus_nattereri
ENSCPOG00000032527	RNASEH2B	97	79.538	ENSRNOG00000009192	Rnaseh2b	95	80.272	Rattus_norvegicus
ENSCPOG00000032527	RNASEH2B	97	70.333	ENSRBIG00000036017	-	95	71.379	Rhinopithecus_bieti
ENSCPOG00000032527	RNASEH2B	100	82.677	ENSRBIG00000028928	-	95	84.711	Rhinopithecus_bieti
ENSCPOG00000032527	RNASEH2B	95	68.182	ENSRROG00000044915	-	85	71.429	Rhinopithecus_roxellana
ENSCPOG00000032527	RNASEH2B	100	81.935	ENSRROG00000018808	-	96	83.557	Rhinopithecus_roxellana
ENSCPOG00000032527	RNASEH2B	100	84.646	ENSSBOG00000008081	RNASEH2B	100	83.929	Saimiri_boliviensis_boliviensis
ENSCPOG00000032527	RNASEH2B	94	61.168	ENSSHAG00000016190	RNASEH2B	94	61.168	Sarcophilus_harrisii
ENSCPOG00000032527	RNASEH2B	90	48.571	ENSSFOG00015010190	rnaseh2b	91	48.571	Scleropages_formosus
ENSCPOG00000032527	RNASEH2B	86	48.889	ENSSMAG00000001546	rnaseh2b	87	48.889	Scophthalmus_maximus
ENSCPOG00000032527	RNASEH2B	89	48.921	ENSSDUG00000007567	rnaseh2b	90	48.921	Seriola_dumerili
ENSCPOG00000032527	RNASEH2B	89	49.462	ENSSLDG00000012485	rnaseh2b	92	48.029	Seriola_lalandi_dorsalis
ENSCPOG00000032527	RNASEH2B	84	58.175	ENSSPUG00000006745	-	94	58.175	Sphenodon_punctatus
ENSCPOG00000032527	RNASEH2B	89	49.640	ENSSPAG00000020926	rnaseh2b	90	49.640	Stegastes_partitus
ENSCPOG00000032527	RNASEH2B	97	85.366	ENSSSCG00000024385	RNASEH2B	100	83.214	Sus_scrofa
ENSCPOG00000032527	RNASEH2B	87	58.889	ENSTGUG00000012104	RNASEH2B	99	58.889	Taeniopygia_guttata
ENSCPOG00000032527	RNASEH2B	87	50.923	ENSTRUG00000015098	rnaseh2b	87	51.301	Takifugu_rubripes
ENSCPOG00000032527	RNASEH2B	86	50.923	ENSTNIG00000013861	rnaseh2b	87	50.923	Tetraodon_nigroviridis
ENSCPOG00000032527	RNASEH2B	93	76.632	ENSTTRG00000010761	RNASEH2B	94	76.632	Tursiops_truncatus
ENSCPOG00000032527	RNASEH2B	92	83.451	ENSUAMG00000022849	RNASEH2B	100	83.036	Ursus_americanus
ENSCPOG00000032527	RNASEH2B	92	83.099	ENSUMAG00000018556	RNASEH2B	100	82.589	Ursus_maritimus
ENSCPOG00000032527	RNASEH2B	93	83.045	ENSVPAG00000005679	RNASEH2B	100	83.045	Vicugna_pacos
ENSCPOG00000032527	RNASEH2B	92	79.298	ENSVVUG00000024015	RNASEH2B	85	79.298	Vulpes_vulpes
ENSCPOG00000032527	RNASEH2B	94	54.762	ENSXETG00000020720	rnaseh2b	95	54.762	Xenopus_tropicalis
ENSCPOG00000032527	RNASEH2B	92	47.018	ENSXCOG00000018732	rnaseh2b	96	47.018	Xiphophorus_couchianus
ENSCPOG00000032527	RNASEH2B	86	50.186	ENSXMAG00000022554	rnaseh2b	87	50.186	Xiphophorus_maculatus