EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000033321 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 3489 bases
Position: chrDS562962.1:4266125-4269613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023682	RIO1	PF01163.22	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000034640	-	1815	-	ENSCPOP00000023682	604 (aa)	-	A0A286XDZ5

Gene Model

Click here to download ENSCPOG00000033321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000033321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000033321	-	54	99.693	ENSCPOG00000034310	-	100	99.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000033321	-	54	38.182	ENSCGRG00001007918	-	69	38.209	Cricetulus_griseus_chok1gshd
ENSCPOG00000033321	-	52	40.379	ENSCGRG00001006023	Gm4922	63	40.379	Cricetulus_griseus_chok1gshd
ENSCPOG00000033321	-	52	38.558	ENSCGRG00001010553	-	64	38.558	Cricetulus_griseus_chok1gshd
ENSCPOG00000033321	-	52	40.379	ENSCGRG00000009530	Gm4922	63	40.379	Cricetulus_griseus_crigri
ENSCPOG00000033321	-	57	39.244	ENSFDAG00000016208	-	75	39.181	Fukomys_damarensis
ENSCPOG00000033321	-	52	38.558	MGP_CAROLIEiJ_G0015144	Gm4922	63	38.558	Mus_caroli
ENSCPOG00000033321	-	54	36.061	MGP_CAROLIEiJ_G0021079	-	68	36.061	Mus_caroli
ENSCPOG00000033321	-	54	36.061	MGP_CAROLIEiJ_G0021081	-	68	36.061	Mus_caroli
ENSCPOG00000033321	-	54	36.061	MGP_CAROLIEiJ_G0021080	-	68	36.061	Mus_caroli
ENSCPOG00000033321	-	54	36.061	MGP_CAROLIEiJ_G0021082	-	68	36.061	Mus_caroli
ENSCPOG00000033321	-	56	36.550	ENSMUSG00000075599	Smok3a	67	36.550	Mus_musculus
ENSCPOG00000033321	-	54	36.747	ENSMUSG00000075598	Smok3c	65	36.747	Mus_musculus
ENSCPOG00000033321	-	54	38.226	ENSMUSG00000044624	Gm4922	65	38.226	Mus_musculus
ENSCPOG00000033321	-	52	38.006	ENSMUSG00000073457	Smok2b	65	38.006	Mus_musculus
ENSCPOG00000033321	-	55	36.443	ENSMUSG00000073458	Smok2a	67	36.443	Mus_musculus
ENSCPOG00000033321	-	54	36.036	ENSMUSG00000101361	Gm7356	64	36.036	Mus_musculus
ENSCPOG00000033321	-	54	35.736	ENSMUSG00000067941	Gm7168	64	35.736	Mus_musculus
ENSCPOG00000033321	-	54	35.952	ENSMUSG00000101307	Gm7358	64	35.952	Mus_musculus
ENSCPOG00000033321	-	56	36.550	ENSMUSG00000079156	Smok3b	67	36.550	Mus_musculus
ENSCPOG00000033321	-	51	40.064	MGP_PahariEiJ_G0023763	Gm4922	63	40.064	Mus_pahari
ENSCPOG00000033321	-	52	38.608	MGP_SPRETEiJ_G0015952	Gm4922	63	38.608	Mus_spretus
ENSCPOG00000033321	-	52	40.635	ENSNGAG00000008026	-	62	40.635	Nannospalax_galili
ENSCPOG00000033321	-	52	41.824	ENSPEMG00000022024	-	80	41.824	Peromyscus_maniculatus_bairdii
ENSCPOG00000033321	-	52	39.308	ENSRNOG00000025799	RGD1560303	64	39.308	Rattus_norvegicus
ENSCPOG00000033321	-	52	37.383	ENSRNOG00000030145	RGD1561667	63	37.383	Rattus_norvegicus
ENSCPOG00000033321	-	54	39.458	ENSRNOG00000059551	RGD1560718	65	39.458	Rattus_norvegicus
ENSCPOG00000033321	-	53	39.571	ENSRNOG00000024200	LOC690235	65	39.571	Rattus_norvegicus
ENSCPOG00000033321	-	54	39.450	ENSRNOG00000052093	Smok2a	65	39.450	Rattus_norvegicus