EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000033345 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 39770 bases
Position: chrDS563091.1:485660-525429
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	1	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	2	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	3	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	4	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	5	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	6	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	7	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	8	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	9	10
ENSCPOP00000021330	zf-C2H2	PF00096.26	2.7e-58	10	10
ENSCPOP00000021330	zf-met	PF12874.7	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000045017	-	3179	-	ENSCPOP00000021330	347 (aa)	-	A0A286X7D9

Gene Model

Click here to download ENSCPOG00000033345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000033345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000033345	-	97	48.159	ENSCPOG00000003954	ZNF317	71	51.613
ENSCPOG00000033345	-	90	38.776	ENSCPOG00000030326	-	75	38.776
ENSCPOG00000033345	-	90	56.452	ENSCPOG00000000634	ZFP1	76	56.452
ENSCPOG00000033345	-	94	32.597	ENSCPOG00000034707	ZNF646	86	32.990
ENSCPOG00000033345	-	90	54.770	ENSCPOG00000031196	ZNF81	76	54.770
ENSCPOG00000033345	-	90	47.287	ENSCPOG00000025607	ZBTB14	50	47.287
ENSCPOG00000033345	-	90	50.704	ENSCPOG00000012883	PRDM5	78	50.704
ENSCPOG00000033345	-	89	54.237	ENSCPOG00000039249	ZNF784	65	54.237
ENSCPOG00000033345	-	89	38.542	ENSCPOG00000000162	ZNF423	96	32.258
ENSCPOG00000033345	-	92	47.788	ENSCPOG00000002374	ZIC3	61	47.788
ENSCPOG00000033345	-	97	68.489	ENSCPOG00000034004	-	98	68.489
ENSCPOG00000033345	-	97	53.846	ENSCPOG00000032242	-	62	53.846
ENSCPOG00000033345	-	90	54.545	ENSCPOG00000039731	ZNF235	73	54.545
ENSCPOG00000033345	-	91	51.351	ENSCPOG00000034791	-	72	53.722
ENSCPOG00000033345	-	97	50.000	ENSCPOG00000040579	ZNF865	78	39.738
ENSCPOG00000033345	-	92	54.800	ENSCPOG00000035126	ZNF2	61	54.800
ENSCPOG00000033345	-	90	52.518	ENSCPOG00000005238	ZNF768	53	52.669
ENSCPOG00000033345	-	91	39.091	ENSCPOG00000000780	ZNF574	93	38.922
ENSCPOG00000033345	-	91	54.511	ENSCPOG00000040740	ZNF226	79	54.511
ENSCPOG00000033345	-	89	46.552	ENSCPOG00000033316	WT1	50	45.378
ENSCPOG00000033345	-	98	51.447	ENSCPOG00000035016	ZNF112	84	51.447
ENSCPOG00000033345	-	89	35.294	ENSCPOG00000034474	ZNF526	80	35.662
ENSCPOG00000033345	-	94	50.633	ENSCPOG00000008424	ZNF236	68	50.633
ENSCPOG00000033345	-	90	39.271	ENSCPOG00000010143	GTF3A	79	39.431
ENSCPOG00000033345	-	97	56.250	ENSCPOG00000035563	-	89	56.250
ENSCPOG00000033345	-	97	53.659	ENSCPOG00000036704	-	77	53.659
ENSCPOG00000033345	-	97	39.446	ENSCPOG00000030357	ZNF319	91	39.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000033345	-	99	87.861	ENSCGRG00001023858	Zfp560	72	87.861	Cricetulus_griseus_chok1gshd
ENSCPOG00000033345	-	99	87.861	ENSCGRG00000012088	Zfp560	72	87.861	Cricetulus_griseus_crigri
ENSCPOG00000033345	-	100	96.542	ENSFDAG00000008687	-	100	96.542	Fukomys_damarensis
ENSCPOG00000033345	-	100	95.389	ENSHGLG00000019054	-	100	95.389	Heterocephalus_glaber_female
ENSCPOG00000033345	-	100	95.389	ENSHGLG00100015134	-	90	95.389	Heterocephalus_glaber_male
ENSCPOG00000033345	-	100	89.625	ENSSTOG00000033893	-	91	89.625	Ictidomys_tridecemlineatus
ENSCPOG00000033345	-	100	85.303	ENSMOCG00000007908	Zfp560	84	85.303	Microtus_ochrogaster
ENSCPOG00000033345	-	100	89.337	ENSNGAG00000015897	Zfp560	83	89.337	Nannospalax_galili
ENSCPOG00000033345	-	100	94.236	ENSODEG00000017047	-	100	94.236	Octodon_degus
ENSCPOG00000033345	-	96	85.443	ENSOCUG00000029594	-	90	85.443	Oryctolagus_cuniculus
ENSCPOG00000033345	-	90	61.905	ENSOGAG00000025131	ZNF121	96	61.905	Otolemur_garnettii
ENSCPOG00000033345	-	100	85.014	ENSRNOG00000048394	Zfp560	82	85.014	Rattus_norvegicus