EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000034004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 5554 bases
Position: chrDS563091.1:515788-521341
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	1	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	2	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	3	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	4	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	5	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	6	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	7	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	8	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	9	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	10	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	11	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	12	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	13	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	14	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	15	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	16	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	17	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	18	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	19	20
ENSCPOP00000027618	zf-C2H2	PF00096.26	6.1e-117	20	20
ENSCPOP00000027618	zf-met	PF12874.7	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000042252	-	4837	-	ENSCPOP00000027618	831 (aa)	-	A0A286XQ14

Gene Model

Click here to download ENSCPOG00000034004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000034004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000034004	-	93	45.414	ENSCPOG00000031196	ZNF81	74	45.414
ENSCPOG00000034004	-	89	51.837	ENSCPOG00000000634	ZFP1	99	51.837
ENSCPOG00000034004	-	88	52.313	ENSCPOG00000032242	-	73	52.218
ENSCPOG00000034004	-	68	44.068	ENSCPOG00000030326	-	94	44.068
ENSCPOG00000034004	-	80	32.897	ENSCPOG00000000780	ZNF574	95	34.909
ENSCPOG00000034004	-	80	44.017	ENSCPOG00000036704	-	77	44.017
ENSCPOG00000034004	-	77	46.018	ENSCPOG00000002374	ZIC3	67	46.018
ENSCPOG00000034004	-	89	52.000	ENSCPOG00000035126	ZNF2	79	51.600
ENSCPOG00000034004	-	87	48.311	ENSCPOG00000040740	ZNF226	84	48.311
ENSCPOG00000034004	-	82	41.667	ENSCPOG00000008424	ZNF236	80	41.667
ENSCPOG00000034004	-	77	38.462	ENSCPOG00000010143	GTF3A	87	35.573
ENSCPOG00000034004	-	83	45.781	ENSCPOG00000035016	ZNF112	84	45.781
ENSCPOG00000034004	-	85	48.131	ENSCPOG00000011640	MYNN	53	48.131
ENSCPOG00000034004	-	84	48.148	ENSCPOG00000040579	ZNF865	79	35.821
ENSCPOG00000034004	-	80	46.226	ENSCPOG00000026663	SNAI1	56	46.226
ENSCPOG00000034004	-	77	44.643	ENSCPOG00000006564	SALL1	57	44.643
ENSCPOG00000034004	-	77	40.244	ENSCPOG00000039975	ZNF652	59	38.676
ENSCPOG00000034004	-	89	52.586	ENSCPOG00000035563	-	89	52.586
ENSCPOG00000034004	-	86	35.438	ENSCPOG00000030357	ZNF319	94	34.921
ENSCPOG00000034004	-	77	41.237	ENSCPOG00000000162	ZNF423	93	41.237
ENSCPOG00000034004	-	68	46.226	ENSCPOG00000033316	WT1	50	44.954
ENSCPOG00000034004	-	81	35.817	ENSCPOG00000004622	ZBTB41	51	35.817
ENSCPOG00000034004	-	79	50.360	ENSCPOG00000005238	ZNF768	63	50.178
ENSCPOG00000034004	-	84	41.549	ENSCPOG00000012883	PRDM5	84	47.887
ENSCPOG00000034004	-	73	35.096	ENSCPOG00000039249	ZNF784	66	35.577
ENSCPOG00000034004	-	98	68.489	ENSCPOG00000033345	-	97	68.489
ENSCPOG00000034004	-	78	44.030	ENSCPOG00000033449	-	52	44.030
ENSCPOG00000034004	-	86	51.899	ENSCPOG00000034791	-	88	51.899
ENSCPOG00000034004	-	85	49.788	ENSCPOG00000039731	ZNF235	74	49.788
ENSCPOG00000034004	-	96	50.394	ENSCPOG00000003954	ZNF317	81	50.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000034004	-	97	90.648	ENSCAPG00000003129	-	94	90.648	Cavia_aperea
ENSCPOG00000034004	-	98	94.370	ENSCLAG00000012556	-	96	92.108	Chinchilla_lanigera
ENSCPOG00000034004	-	99	82.672	ENSCGRG00001000576	Zfp26	81	82.672	Cricetulus_griseus_chok1gshd
ENSCPOG00000034004	-	97	83.197	ENSCGRG00000000280	-	93	83.197	Cricetulus_griseus_crigri
ENSCPOG00000034004	-	99	82.672	ENSCGRG00000010436	-	81	82.672	Cricetulus_griseus_crigri
ENSCPOG00000034004	-	98	79.668	ENSDORG00000027564	Zfp26	85	79.668	Dipodomys_ordii
ENSCPOG00000034004	-	99	94.340	ENSFDAG00000009594	-	87	94.340	Fukomys_damarensis
ENSCPOG00000034004	-	100	91.588	ENSHGLG00000005362	-	88	91.588	Heterocephalus_glaber_female
ENSCPOG00000034004	-	99	94.055	ENSHGLG00100007268	-	91	94.055	Heterocephalus_glaber_male
ENSCPOG00000034004	-	98	79.657	ENSSTOG00000023536	-	84	79.657	Ictidomys_tridecemlineatus
ENSCPOG00000034004	-	99	77.251	ENSJJAG00000020082	-	91	77.251	Jaculus_jaculus
ENSCPOG00000034004	-	99	82.166	ENSMAUG00000017074	Zfp26	94	83.401	Mesocricetus_auratus
ENSCPOG00000034004	-	99	81.242	ENSMOCG00000015724	Zfp26	90	81.242	Microtus_ochrogaster
ENSCPOG00000034004	-	99	76.781	ENSMUSG00000063108	Zfp26	81	76.781	Mus_musculus
ENSCPOG00000034004	-	99	77.494	ENSNGAG00000020695	Zfp26	82	77.494	Nannospalax_galili
ENSCPOG00000034004	-	99	94.605	ENSODEG00000016460	-	90	94.605	Octodon_degus
ENSCPOG00000034004	-	96	66.093	ENSOCUG00000029276	-	95	66.093	Oryctolagus_cuniculus
ENSCPOG00000034004	-	98	77.178	ENSPEMG00000016507	Zfp26	81	77.178	Peromyscus_maniculatus_bairdii
ENSCPOG00000034004	-	99	82.299	ENSRNOG00000025937	Zfp26	96	82.299	Rattus_norvegicus