EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000034042 (Gene tree)
Gene ID: 100727203
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 356932 bases
Position: chrDS562908.1:1187074-1544005
Accession: 100727203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000027036	RRM_1	PF00076.22	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000038591	MSI2-201	4952	XM_013149415	ENSCPOP00000027036	283 (aa)	XP_013004869	A0A286XNH1

Gene Model

Click here to download ENSCPOG00000034042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000034042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000034042	MSI2	52	36.242	ENSCPOG00000040150	-	54	34.524
ENSCPOG00000034042	MSI2	51	44.000	ENSCPOG00000025972	HNRNPAB	66	44.000
ENSCPOG00000034042	MSI2	99	68.454	ENSCPOG00000012361	MSI1	100	66.877
ENSCPOG00000034042	MSI2	54	39.007	ENSCPOG00000026092	HNRNPA0	60	36.709
ENSCPOG00000034042	MSI2	53	36.054	ENSCPOG00000004251	HNRNPA3	60	36.478
ENSCPOG00000034042	MSI2	51	37.634	ENSCPOG00000021077	-	63	35.714
ENSCPOG00000034042	MSI2	51	40.698	ENSCPOG00000036630	HNRNPA2B1	54	37.963
ENSCPOG00000034042	MSI2	53	36.054	ENSCPOG00000011301	-	54	36.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000034042	MSI2	99	95.390	ENSG00000153944	MSI2	93	98.571	Homo_sapiens
ENSCPOG00000034042	MSI2	99	88.298	ENSAPOG00000001658	msi2a	93	88.298	Acanthochromis_polyacanthus
ENSCPOG00000034042	MSI2	99	89.667	ENSAMEG00000002697	MSI2	99	89.667	Ailuropoda_melanoleuca
ENSCPOG00000034042	MSI2	99	64.553	ENSACIG00000009475	msi2a	94	63.977	Amphilophus_citrinellus
ENSCPOG00000034042	MSI2	51	72.115	ENSAOCG00000014822	msi2a	58	72.115	Amphiprion_ocellaris
ENSCPOG00000034042	MSI2	99	88.298	ENSAPEG00000007706	msi2a	93	88.298	Amphiprion_percula
ENSCPOG00000034042	MSI2	98	89.928	ENSATEG00000003301	-	100	89.928	Anabas_testudineus
ENSCPOG00000034042	MSI2	99	88.298	ENSATEG00000010498	msi2a	93	88.298	Anabas_testudineus
ENSCPOG00000034042	MSI2	93	95.855	ENSACAG00000005452	MSI2	76	95.455	Anolis_carolinensis
ENSCPOG00000034042	MSI2	99	95.390	ENSANAG00000037827	MSI2	94	95.390	Aotus_nancymaae
ENSCPOG00000034042	MSI2	99	87.943	ENSACLG00000007752	msi2a	93	87.943	Astatotilapia_calliptera
ENSCPOG00000034042	MSI2	99	91.135	ENSAMXG00000010474	msi2b	97	91.135	Astyanax_mexicanus
ENSCPOG00000034042	MSI2	99	90.106	ENSAMXG00000032796	msi2a	94	87.986	Astyanax_mexicanus
ENSCPOG00000034042	MSI2	99	95.035	ENSBTAG00000004406	MSI2	97	95.035	Bos_taurus
ENSCPOG00000034042	MSI2	66	57.635	WBGene00003423	msi-1	71	57.635	Caenorhabditis_elegans
ENSCPOG00000034042	MSI2	99	95.390	ENSCJAG00000013998	MSI2	94	95.390	Callithrix_jacchus
ENSCPOG00000034042	MSI2	99	89.667	ENSCAFG00020025620	MSI2	81	89.667	Canis_lupus_dingo
ENSCPOG00000034042	MSI2	99	95.035	ENSCHIG00000016580	MSI2	94	95.035	Capra_hircus
ENSCPOG00000034042	MSI2	99	95.390	ENSCCAG00000033927	MSI2	94	95.390	Cebus_capucinus
ENSCPOG00000034042	MSI2	99	95.390	ENSCATG00000040879	MSI2	94	95.390	Cercocebus_atys
ENSCPOG00000034042	MSI2	99	89.667	ENSCLAG00000014325	MSI2	94	89.667	Chinchilla_lanigera
ENSCPOG00000034042	MSI2	99	95.390	ENSCSAG00000005633	MSI2	94	95.390	Chlorocebus_sabaeus
ENSCPOG00000034042	MSI2	95	63.941	ENSCHOG00000008660	MSI2	96	63.941	Choloepus_hoffmanni
ENSCPOG00000034042	MSI2	96	98.558	ENSCPBG00000009942	MSI2	97	91.544	Chrysemys_picta_bellii
ENSCPOG00000034042	MSI2	72	54.634	ENSCING00000018579	-	97	52.915	Ciona_intestinalis
ENSCPOG00000034042	MSI2	61	68.362	ENSCSAVG00000010397	-	71	66.848	Ciona_savignyi
ENSCPOG00000034042	MSI2	99	89.667	ENSCANG00000036414	MSI2	100	89.667	Colobus_angolensis_palliatus
ENSCPOG00000034042	MSI2	99	95.053	ENSCGRG00001013330	Msi2	94	95.053	Cricetulus_griseus_chok1gshd
ENSCPOG00000034042	MSI2	99	89.369	ENSCGRG00000003141	Msi2	100	89.369	Cricetulus_griseus_crigri
ENSCPOG00000034042	MSI2	54	59.420	ENSCSEG00000013549	msi2a	88	59.420	Cynoglossus_semilaevis
ENSCPOG00000034042	MSI2	99	78.723	ENSCSEG00000003266	-	91	78.723	Cynoglossus_semilaevis
ENSCPOG00000034042	MSI2	69	75.258	ENSCSEG00000013557	msi2a	83	74.227	Cynoglossus_semilaevis
ENSCPOG00000034042	MSI2	95	87.361	ENSCVAG00000017075	msi2a	92	87.687	Cyprinodon_variegatus
ENSCPOG00000034042	MSI2	91	89.535	ENSDARG00000032614	msi2b	100	92.188	Danio_rerio
ENSCPOG00000034042	MSI2	99	71.637	ENSDARG00000033901	msi2a	95	71.637	Danio_rerio
ENSCPOG00000034042	MSI2	99	95.390	ENSDNOG00000014501	MSI2	100	95.390	Dasypus_novemcinctus
ENSCPOG00000034042	MSI2	69	88.832	ENSDORG00000005394	Msi2	84	87.817	Dipodomys_ordii
ENSCPOG00000034042	MSI2	51	85.393	ENSDORG00000028440	-	100	85.393	Dipodomys_ordii
ENSCPOG00000034042	MSI2	99	53.416	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSCPOG00000034042	MSI2	54	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSCPOG00000034042	MSI2	98	62.207	ENSEBUG00000006732	msi2a	86	60.535	Eptatretus_burgeri
ENSCPOG00000034042	MSI2	99	92.414	ENSEASG00005002965	MSI2	97	82.462	Equus_asinus_asinus
ENSCPOG00000034042	MSI2	99	87.013	ENSECAG00000011435	MSI2	87	98.696	Equus_caballus
ENSCPOG00000034042	MSI2	89	85.375	ENSEEUG00000007810	MSI2	100	85.375	Erinaceus_europaeus
ENSCPOG00000034042	MSI2	99	83.498	ENSELUG00000001361	msi2b	93	83.498	Esox_lucius
ENSCPOG00000034042	MSI2	99	89.716	ENSELUG00000011747	msi2a	93	89.716	Esox_lucius
ENSCPOG00000034042	MSI2	50	70.909	ENSFCAG00000033787	-	67	70.909	Felis_catus
ENSCPOG00000034042	MSI2	99	95.390	ENSFCAG00000041686	MSI2	94	95.390	Felis_catus
ENSCPOG00000034042	MSI2	99	89.667	ENSFDAG00000016118	MSI2	100	89.667	Fukomys_damarensis
ENSCPOG00000034042	MSI2	99	87.943	ENSFHEG00000000084	msi2a	93	87.943	Fundulus_heteroclitus
ENSCPOG00000034042	MSI2	99	88.000	ENSGALG00000005567	MSI2	94	88.000	Gallus_gallus
ENSCPOG00000034042	MSI2	95	78.832	ENSGAFG00000006974	msi2a	92	79.121	Gambusia_affinis
ENSCPOG00000034042	MSI2	99	93.119	ENSGAGG00000016542	MSI2	100	87.171	Gopherus_agassizii
ENSCPOG00000034042	MSI2	99	89.667	ENSGGOG00000013182	MSI2	100	89.667	Gorilla_gorilla
ENSCPOG00000034042	MSI2	99	87.943	ENSHBUG00000020800	msi2a	93	87.943	Haplochromis_burtoni
ENSCPOG00000034042	MSI2	99	79.333	ENSHGLG00000012444	MSI2	85	79.333	Heterocephalus_glaber_female
ENSCPOG00000034042	MSI2	51	85.556	ENSHGLG00100004028	-	87	85.556	Heterocephalus_glaber_male
ENSCPOG00000034042	MSI2	67	91.304	ENSHGLG00100003744	MSI2	100	91.304	Heterocephalus_glaber_male
ENSCPOG00000034042	MSI2	93	83.645	ENSHCOG00000017241	-	64	84.536	Hippocampus_comes
ENSCPOG00000034042	MSI2	96	86.829	ENSHCOG00000000266	msi2a	91	79.452	Hippocampus_comes
ENSCPOG00000034042	MSI2	99	89.716	ENSIPUG00000021097	msi2a	93	88.298	Ictalurus_punctatus
ENSCPOG00000034042	MSI2	99	86.879	ENSIPUG00000003732	msi2b	93	86.879	Ictalurus_punctatus
ENSCPOG00000034042	MSI2	100	100.000	ENSSTOG00000007884	MSI2	100	100.000	Ictidomys_tridecemlineatus
ENSCPOG00000034042	MSI2	51	85.393	ENSJJAG00000009467	-	100	85.393	Jaculus_jaculus
ENSCPOG00000034042	MSI2	67	85.930	ENSJJAG00000006292	-	100	85.427	Jaculus_jaculus
ENSCPOG00000034042	MSI2	95	86.617	ENSKMAG00000009494	msi2a	89	86.940	Kryptolebias_marmoratus
ENSCPOG00000034042	MSI2	98	61.877	ENSLBEG00000026223	-	100	61.877	Labrus_bergylta
ENSCPOG00000034042	MSI2	99	88.298	ENSLBEG00000007061	msi2a	93	88.298	Labrus_bergylta
ENSCPOG00000034042	MSI2	50	75.862	ENSLACG00000016798	MSI2	89	75.862	Latimeria_chalumnae
ENSCPOG00000034042	MSI2	99	73.900	ENSLOCG00000004675	msi2b	95	73.900	Lepisosteus_oculatus
ENSCPOG00000034042	MSI2	99	89.667	ENSMFAG00000003775	MSI2	100	89.667	Macaca_fascicularis
ENSCPOG00000034042	MSI2	99	89.667	ENSMMUG00000002069	MSI2	100	89.667	Macaca_mulatta
ENSCPOG00000034042	MSI2	99	95.390	ENSMNEG00000045275	MSI2	94	95.390	Macaca_nemestrina
ENSCPOG00000034042	MSI2	99	89.667	ENSMLEG00000033888	MSI2	100	89.667	Mandrillus_leucophaeus
ENSCPOG00000034042	MSI2	99	85.461	ENSMAMG00000002488	-	88	85.461	Mastacembelus_armatus
ENSCPOG00000034042	MSI2	99	87.633	ENSMAMG00000010503	msi2a	93	85.866	Mastacembelus_armatus
ENSCPOG00000034042	MSI2	99	87.943	ENSMZEG00005007676	msi2a	94	87.943	Maylandia_zebra
ENSCPOG00000034042	MSI2	99	89.369	ENSMAUG00000003862	Msi2	94	89.369	Mesocricetus_auratus
ENSCPOG00000034042	MSI2	91	77.186	ENSMICG00000032913	-	93	78.327	Microcebus_murinus
ENSCPOG00000034042	MSI2	99	95.390	ENSMICG00000013598	-	94	95.390	Microcebus_murinus
ENSCPOG00000034042	MSI2	99	89.667	ENSMOCG00000005820	Msi2	94	89.667	Microtus_ochrogaster
ENSCPOG00000034042	MSI2	95	79.182	ENSMMOG00000008348	msi2a	91	79.795	Mola_mola
ENSCPOG00000034042	MSI2	67	89.855	ENSMODG00000014790	MSI2	100	89.855	Monodelphis_domestica
ENSCPOG00000034042	MSI2	99	84.752	ENSMALG00000000071	msi2a	93	84.752	Monopterus_albus
ENSCPOG00000034042	MSI2	99	95.390	MGP_CAROLIEiJ_G0016948	Msi2	94	95.390	Mus_caroli
ENSCPOG00000034042	MSI2	99	95.390	ENSMUSG00000069769	Msi2	94	95.390	Mus_musculus
ENSCPOG00000034042	MSI2	99	95.390	MGP_PahariEiJ_G0018079	Msi2	94	95.390	Mus_pahari
ENSCPOG00000034042	MSI2	99	95.390	MGP_SPRETEiJ_G0017795	Msi2	94	95.390	Mus_spretus
ENSCPOG00000034042	MSI2	99	95.390	ENSMPUG00000015377	MSI2	97	95.390	Mustela_putorius_furo
ENSCPOG00000034042	MSI2	99	95.390	ENSMLUG00000007865	MSI2	97	95.390	Myotis_lucifugus
ENSCPOG00000034042	MSI2	99	89.667	ENSNGAG00000017807	Msi2	94	89.667	Nannospalax_galili
ENSCPOG00000034042	MSI2	99	87.943	ENSNBRG00000014596	msi2a	93	87.943	Neolamprologus_brichardi
ENSCPOG00000034042	MSI2	99	89.667	ENSNLEG00000008059	MSI2	99	89.667	Nomascus_leucogenys
ENSCPOG00000034042	MSI2	54	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSCPOG00000034042	MSI2	99	89.667	ENSODEG00000011974	MSI2	94	89.667	Octodon_degus
ENSCPOG00000034042	MSI2	51	82.857	ENSONIG00000001972	msi2a	72	82.857	Oreochromis_niloticus
ENSCPOG00000034042	MSI2	93	92.424	ENSOANG00000005667	MSI2	69	92.424	Ornithorhynchus_anatinus
ENSCPOG00000034042	MSI2	99	95.390	ENSOCUG00000010440	MSI2	97	95.390	Oryctolagus_cuniculus
ENSCPOG00000034042	MSI2	99	88.298	ENSORLG00000009671	msi2a	94	88.298	Oryzias_latipes
ENSCPOG00000034042	MSI2	99	88.298	ENSORLG00020021556	msi2a	94	88.298	Oryzias_latipes_hni
ENSCPOG00000034042	MSI2	99	88.298	ENSORLG00015004592	msi2a	94	88.298	Oryzias_latipes_hsok
ENSCPOG00000034042	MSI2	99	88.298	ENSOMEG00000000146	msi2a	96	88.298	Oryzias_melastigma
ENSCPOG00000034042	MSI2	99	90.426	ENSOGAG00000005621	MSI2	99	90.426	Otolemur_garnettii
ENSCPOG00000034042	MSI2	99	89.667	ENSPPAG00000037697	MSI2	100	89.667	Pan_paniscus
ENSCPOG00000034042	MSI2	99	95.390	ENSPPRG00000001848	MSI2	94	95.390	Panthera_pardus
ENSCPOG00000034042	MSI2	65	86.885	ENSPTIG00000021873	-	75	86.885	Panthera_tigris_altaica
ENSCPOG00000034042	MSI2	99	89.667	ENSPTIG00000021678	MSI2	96	89.667	Panthera_tigris_altaica
ENSCPOG00000034042	MSI2	99	89.667	ENSPTRG00000009437	MSI2	100	89.667	Pan_troglodytes
ENSCPOG00000034042	MSI2	99	95.390	ENSPANG00000022319	MSI2	94	95.390	Papio_anubis
ENSCPOG00000034042	MSI2	95	85.502	ENSPKIG00000007038	-	97	75.710	Paramormyrops_kingsleyae
ENSCPOG00000034042	MSI2	99	93.119	ENSPSIG00000008618	MSI2	76	96.970	Pelodiscus_sinensis
ENSCPOG00000034042	MSI2	99	87.589	ENSPMGG00000005888	msi2a	93	87.589	Periophthalmus_magnuspinnatus
ENSCPOG00000034042	MSI2	51	85.393	ENSPEMG00000021793	-	100	85.393	Peromyscus_maniculatus_bairdii
ENSCPOG00000034042	MSI2	99	88.333	ENSPCIG00000006063	MSI2	94	85.714	Phascolarctos_cinereus
ENSCPOG00000034042	MSI2	51	76.289	ENSPLAG00000000436	msi2a	64	77.895	Poecilia_latipinna
ENSCPOG00000034042	MSI2	51	81.111	ENSPMEG00000013247	msi2a	62	81.111	Poecilia_mexicana
ENSCPOG00000034042	MSI2	99	85.461	ENSPREG00000000881	msi2a	92	85.461	Poecilia_reticulata
ENSCPOG00000034042	MSI2	84	96.639	ENSPPYG00000008244	-	100	96.639	Pongo_abelii
ENSCPOG00000034042	MSI2	84	70.588	ENSPCAG00000010552	MSI2	100	70.588	Procavia_capensis
ENSCPOG00000034042	MSI2	51	87.619	ENSPCOG00000019195	-	93	87.619	Propithecus_coquereli
ENSCPOG00000034042	MSI2	99	85.816	ENSPVAG00000017053	MSI2	99	85.816	Pteropus_vampyrus
ENSCPOG00000034042	MSI2	99	87.943	ENSPNYG00000018393	msi2a	94	87.943	Pundamilia_nyererei
ENSCPOG00000034042	MSI2	99	90.459	ENSPNAG00000000844	msi2b	93	88.693	Pygocentrus_nattereri
ENSCPOG00000034042	MSI2	99	90.106	ENSPNAG00000014957	msi2a	94	88.339	Pygocentrus_nattereri
ENSCPOG00000034042	MSI2	98	96.763	ENSRNOG00000025338	Msi2	100	96.763	Rattus_norvegicus
ENSCPOG00000034042	MSI2	51	85.393	ENSRROG00000034421	-	92	85.393	Rhinopithecus_roxellana
ENSCPOG00000034042	MSI2	99	89.667	ENSSBOG00000026425	MSI2	100	89.667	Saimiri_boliviensis_boliviensis
ENSCPOG00000034042	MSI2	99	88.333	ENSSHAG00000008672	MSI2	100	88.333	Sarcophilus_harrisii
ENSCPOG00000034042	MSI2	89	90.164	ENSSFOG00015012168	msi2b	63	90.164	Scleropages_formosus
ENSCPOG00000034042	MSI2	99	86.170	ENSSFOG00015021687	-	97	84.397	Scleropages_formosus
ENSCPOG00000034042	MSI2	99	88.298	ENSSMAG00000018484	msi2a	93	88.298	Scophthalmus_maximus
ENSCPOG00000034042	MSI2	99	82.877	ENSSDUG00000021968	-	91	83.219	Seriola_dumerili
ENSCPOG00000034042	MSI2	99	88.298	ENSSDUG00000014507	msi2a	93	88.298	Seriola_dumerili
ENSCPOG00000034042	MSI2	99	88.298	ENSSLDG00000017172	msi2a	93	88.298	Seriola_lalandi_dorsalis
ENSCPOG00000034042	MSI2	51	83.929	ENSSPUG00000000913	-	81	83.929	Sphenodon_punctatus
ENSCPOG00000034042	MSI2	96	87.317	ENSSPAG00000017793	msi2a	88	81.560	Stegastes_partitus
ENSCPOG00000034042	MSI2	99	95.390	ENSSSCG00000038505	MSI2	94	95.390	Sus_scrofa
ENSCPOG00000034042	MSI2	67	90.338	ENSTGUG00000008452	MSI2	100	90.338	Taeniopygia_guttata
ENSCPOG00000034042	MSI2	99	87.589	ENSTRUG00000021248	msi2a	88	87.589	Takifugu_rubripes
ENSCPOG00000034042	MSI2	69	80.102	ENSTBEG00000001241	MSI2	60	80.102	Tupaia_belangeri
ENSCPOG00000034042	MSI2	84	90.756	ENSTTRG00000002189	MSI2	100	90.756	Tursiops_truncatus
ENSCPOG00000034042	MSI2	99	95.390	ENSUAMG00000000700	MSI2	97	95.390	Ursus_americanus
ENSCPOG00000034042	MSI2	94	88.679	ENSUMAG00000000505	MSI2	95	88.679	Ursus_maritimus
ENSCPOG00000034042	MSI2	60	76.023	ENSVPAG00000006837	-	62	76.023	Vicugna_pacos
ENSCPOG00000034042	MSI2	99	95.390	ENSVVUG00000011783	MSI2	94	89.667	Vulpes_vulpes
ENSCPOG00000034042	MSI2	89	87.500	ENSXCOG00000006113	msi2a	83	87.500	Xiphophorus_couchianus
ENSCPOG00000034042	MSI2	96	87.317	ENSXMAG00000000608	msi2a	92	87.687	Xiphophorus_maculatus