EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000034399 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1426 bases
Position: chrDS562858.1:7127514-7128939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023917	MMR_HSR1	PF01926.23	9.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035124	-	954	-	ENSCPOP00000023917	317 (aa)	-	A0A286XEQ5

Gene Model

Click here to download ENSCPOG00000034399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000034399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000034399	-	75	49.446	ENSCPOG00000003088	SEPT1	73	49.446
ENSCPOG00000034399	-	90	46.307	ENSCPOG00000003438	SEPT4	86	55.019
ENSCPOG00000034399	-	82	37.417	ENSCPOG00000012711	SEPT9	87	37.667
ENSCPOG00000034399	-	78	35.448	ENSCPOG00000004011	-	75	35.448
ENSCPOG00000034399	-	79	33.793	ENSCPOG00000004533	SEPT10	64	33.793
ENSCPOG00000034399	-	100	79.167	ENSCPOG00000013687	-	99	79.167
ENSCPOG00000034399	-	78	34.965	ENSCPOG00000009996	SEPT14	78	34.965
ENSCPOG00000034399	-	78	39.209	ENSCPOG00000013212	-	77	39.209
ENSCPOG00000034399	-	76	52.768	ENSCPOG00000012518	SEPT7	61	52.768
ENSCPOG00000034399	-	93	35.061	ENSCPOG00000007247	SEPT8	70	35.061
ENSCPOG00000034399	-	80	34.343	ENSCPOG00000009037	SEPT11	67	34.343
ENSCPOG00000034399	-	94	48.338	ENSCPOG00000010483	-	77	53.873
ENSCPOG00000034399	-	76	37.918	ENSCPOG00000011596	SEPT12	74	37.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000034399	-	96	68.333	ENSAPOG00000001837	sept2	95	67.450	Acanthochromis_polyacanthus
ENSCPOG00000034399	-	92	77.910	ENSAMEG00000016539	SEPT2	100	77.933	Ailuropoda_melanoleuca
ENSCPOG00000034399	-	83	71.987	ENSACIG00000021718	sept2	90	72.964	Amphilophus_citrinellus
ENSCPOG00000034399	-	96	71.182	ENSAOCG00000000954	sept2	93	72.372	Amphiprion_ocellaris
ENSCPOG00000034399	-	96	68.391	ENSAPEG00000013904	sept2	93	69.461	Amphiprion_percula
ENSCPOG00000034399	-	98	71.348	ENSATEG00000019489	sept2	99	69.444	Anabas_testudineus
ENSCPOG00000034399	-	99	74.586	ENSACAG00000001408	SEPT2	99	74.586	Anolis_carolinensis
ENSCPOG00000034399	-	100	78.333	ENSANAG00000023789	SEPT2	99	76.216	Aotus_nancymaae
ENSCPOG00000034399	-	99	67.787	ENSACLG00000009428	sept2	99	66.667	Astatotilapia_calliptera
ENSCPOG00000034399	-	96	71.920	ENSAMXG00000039525	sept2	97	69.914	Astyanax_mexicanus
ENSCPOG00000034399	-	100	77.222	ENSBTAG00000002608	SEPT2	99	77.222	Bos_taurus
ENSCPOG00000034399	-	100	78.611	ENSCJAG00000006122	-	100	75.542	Callithrix_jacchus
ENSCPOG00000034399	-	97	77.904	ENSCAFG00000012960	SEPT2	100	77.904	Canis_familiaris
ENSCPOG00000034399	-	99	77.500	ENSCAFG00020025094	-	99	77.500	Canis_lupus_dingo
ENSCPOG00000034399	-	93	77.448	ENSCHIG00000026614	SEPT2	99	77.222	Capra_hircus
ENSCPOG00000034399	-	100	79.167	ENSTSYG00000003579	-	99	79.167	Carlito_syrichta
ENSCPOG00000034399	-	100	73.121	ENSCCAG00000031252	SEPT2	99	73.121	Cebus_capucinus
ENSCPOG00000034399	-	100	78.889	ENSCATG00000033533	SEPT2	99	78.889	Cercocebus_atys
ENSCPOG00000034399	-	100	79.444	ENSCLAG00000002255	-	99	79.444	Chinchilla_lanigera
ENSCPOG00000034399	-	100	69.970	ENSCLAG00000003230	-	98	69.970	Chinchilla_lanigera
ENSCPOG00000034399	-	100	53.390	ENSCLAG00000007700	-	99	53.107	Chinchilla_lanigera
ENSCPOG00000034399	-	100	78.889	ENSCSAG00000005773	SEPT2	99	78.889	Chlorocebus_sabaeus
ENSCPOG00000034399	-	100	75.610	ENSCHOG00000008715	SEPT2	99	75.610	Choloepus_hoffmanni
ENSCPOG00000034399	-	100	73.961	ENSCPBG00000002410	SEPT2	99	73.961	Chrysemys_picta_bellii
ENSCPOG00000034399	-	88	61.300	ENSCSAVG00000003688	-	94	67.754	Ciona_savignyi
ENSCPOG00000034399	-	100	78.611	ENSCANG00000034470	SEPT2	100	76.087	Colobus_angolensis_palliatus
ENSCPOG00000034399	-	100	78.056	ENSCGRG00001009996	-	99	78.056	Cricetulus_griseus_chok1gshd
ENSCPOG00000034399	-	98	77.966	ENSCGRG00000014494	-	100	77.966	Cricetulus_griseus_crigri
ENSCPOG00000034399	-	91	68.182	ENSCSEG00000017561	sept2	99	66.970	Cynoglossus_semilaevis
ENSCPOG00000034399	-	78	68.836	ENSCVAG00000008351	sept2	89	68.836	Cyprinodon_variegatus
ENSCPOG00000034399	-	97	71.307	ENSDARG00000027590	sept2	95	69.628	Danio_rerio
ENSCPOG00000034399	-	93	77.448	ENSDNOG00000013772	SEPT2	99	77.500	Dasypus_novemcinctus
ENSCPOG00000034399	-	100	78.889	ENSDORG00000000106	-	99	78.889	Dipodomys_ordii
ENSCPOG00000034399	-	81	93.458	ENSETEG00000001868	-	75	93.458	Echinops_telfairi
ENSCPOG00000034399	-	92	64.943	ENSEBUG00000006082	sept2	75	64.943	Eptatretus_burgeri
ENSCPOG00000034399	-	91	49.713	ENSEBUG00000009786	-	96	49.851	Eptatretus_burgeri
ENSCPOG00000034399	-	100	78.889	ENSEASG00005008254	SEPT2	99	78.889	Equus_asinus_asinus
ENSCPOG00000034399	-	100	78.889	ENSECAG00000017553	SEPT2	99	78.889	Equus_caballus
ENSCPOG00000034399	-	97	68.195	ENSELUG00000018507	sept2	99	67.335	Esox_lucius
ENSCPOG00000034399	-	93	77.151	ENSFCAG00000002797	SEPT2	97	77.500	Felis_catus
ENSCPOG00000034399	-	100	75.069	ENSFALG00000003429	SEPT2	99	75.069	Ficedula_albicollis
ENSCPOG00000034399	-	100	79.444	ENSFDAG00000005819	SEPT2	99	79.444	Fukomys_damarensis
ENSCPOG00000034399	-	98	67.422	ENSFHEG00000017419	sept2	95	68.546	Fundulus_heteroclitus
ENSCPOG00000034399	-	98	70.225	ENSGMOG00000017631	sept2	91	69.382	Gadus_morhua
ENSCPOG00000034399	-	100	75.346	ENSGALG00000005809	SEPT2	99	75.346	Gallus_gallus
ENSCPOG00000034399	-	99	67.507	ENSGAFG00000018172	sept2	98	68.293	Gambusia_affinis
ENSCPOG00000034399	-	97	71.143	ENSGACG00000015721	sept2	91	75.986	Gasterosteus_aculeatus
ENSCPOG00000034399	-	100	74.238	ENSGAGG00000004594	SEPT2	99	74.238	Gopherus_agassizii
ENSCPOG00000034399	-	100	78.889	ENSGGOG00000004597	SEPT2	99	78.889	Gorilla_gorilla
ENSCPOG00000034399	-	98	68.022	ENSHBUG00000007012	sept2	99	66.220	Haplochromis_burtoni
ENSCPOG00000034399	-	100	79.444	ENSHGLG00000005291	SEPT2	99	79.444	Heterocephalus_glaber_female
ENSCPOG00000034399	-	100	71.268	ENSHGLG00000014923	-	99	71.268	Heterocephalus_glaber_female
ENSCPOG00000034399	-	100	71.268	ENSHGLG00100001715	-	99	71.268	Heterocephalus_glaber_male
ENSCPOG00000034399	-	100	79.444	ENSHGLG00100018899	SEPT2	99	79.444	Heterocephalus_glaber_male
ENSCPOG00000034399	-	98	70.950	ENSIPUG00000017270	sept2	98	70.670	Ictalurus_punctatus
ENSCPOG00000034399	-	99	79.330	ENSSTOG00000013357	SEPT2	100	79.330	Ictidomys_tridecemlineatus
ENSCPOG00000034399	-	100	78.611	ENSJJAG00000019868	-	99	78.611	Jaculus_jaculus
ENSCPOG00000034399	-	95	71.387	ENSKMAG00000002786	sept2	98	71.429	Kryptolebias_marmoratus
ENSCPOG00000034399	-	96	69.061	ENSLBEG00000007372	sept2	99	66.566	Labrus_bergylta
ENSCPOG00000034399	-	94	67.769	ENSLOCG00000006303	sept2	95	67.324	Lepisosteus_oculatus
ENSCPOG00000034399	-	93	78.042	ENSLAFG00000011964	-	99	78.333	Loxodonta_africana
ENSCPOG00000034399	-	99	77.095	ENSLAFG00000030960	-	99	77.095	Loxodonta_africana
ENSCPOG00000034399	-	100	78.889	ENSMFAG00000039700	SEPT2	99	78.889	Macaca_fascicularis
ENSCPOG00000034399	-	100	78.889	ENSMMUG00000004736	SEPT2	92	86.667	Macaca_mulatta
ENSCPOG00000034399	-	100	78.889	ENSMNEG00000004313	SEPT2	100	78.611	Macaca_nemestrina
ENSCPOG00000034399	-	100	78.889	ENSMLEG00000043469	SEPT2	99	78.889	Mandrillus_leucophaeus
ENSCPOG00000034399	-	99	69.679	ENSMAMG00000004271	sept2	99	68.805	Mastacembelus_armatus
ENSCPOG00000034399	-	98	70.506	ENSMZEG00005005022	sept2	99	68.611	Maylandia_zebra
ENSCPOG00000034399	-	99	75.278	ENSMGAG00000003759	SEPT2	99	75.278	Meleagris_gallopavo
ENSCPOG00000034399	-	99	78.771	ENSMAUG00000011950	-	100	78.771	Mesocricetus_auratus
ENSCPOG00000034399	-	100	78.889	ENSMICG00000000909	SEPT2	99	78.889	Microcebus_murinus
ENSCPOG00000034399	-	100	78.611	ENSMOCG00000014906	-	99	78.611	Microtus_ochrogaster
ENSCPOG00000034399	-	95	68.696	ENSMMOG00000018068	sept2	97	67.536	Mola_mola
ENSCPOG00000034399	-	99	75.556	ENSMODG00000016041	SEPT2	99	75.556	Monodelphis_domestica
ENSCPOG00000034399	-	96	71.347	ENSMALG00000002736	sept2	98	69.688	Monopterus_albus
ENSCPOG00000034399	-	100	78.611	MGP_CAROLIEiJ_G0014457	-	100	86.916	Mus_caroli
ENSCPOG00000034399	-	100	78.333	ENSMUSG00000026276	Sept2	100	86.916	Mus_musculus
ENSCPOG00000034399	-	100	78.333	ENSMUSG00000116048	Sept2	99	78.333	Mus_musculus
ENSCPOG00000034399	-	100	78.611	MGP_PahariEiJ_G0027693	-	100	86.916	Mus_pahari
ENSCPOG00000034399	-	100	78.333	MGP_SPRETEiJ_G0015261	-	100	86.916	Mus_spretus
ENSCPOG00000034399	-	93	78.042	ENSMPUG00000000166	SEPT2	99	78.333	Mustela_putorius_furo
ENSCPOG00000034399	-	99	77.654	ENSMLUG00000007108	SEPT2	100	77.654	Myotis_lucifugus
ENSCPOG00000034399	-	100	78.333	ENSNGAG00000022412	-	99	78.333	Nannospalax_galili
ENSCPOG00000034399	-	98	70.506	ENSNBRG00000003359	sept2	99	68.611	Neolamprologus_brichardi
ENSCPOG00000034399	-	100	78.889	ENSNLEG00000013873	SEPT2	99	78.889	Nomascus_leucogenys
ENSCPOG00000034399	-	83	67.427	ENSMEUG00000016519	-	97	67.427	Notamacropus_eugenii
ENSCPOG00000034399	-	75	70.213	ENSMEUG00000007833	-	100	70.213	Notamacropus_eugenii
ENSCPOG00000034399	-	100	76.087	ENSOPRG00000013796	SEPT2	99	76.087	Ochotona_princeps
ENSCPOG00000034399	-	88	77.259	ENSODEG00000018677	-	100	77.259	Octodon_degus
ENSCPOG00000034399	-	100	77.901	ENSODEG00000019855	-	99	77.901	Octodon_degus
ENSCPOG00000034399	-	100	79.444	ENSODEG00000010316	-	99	79.444	Octodon_degus
ENSCPOG00000034399	-	98	70.506	ENSONIG00000010605	sept2	98	69.382	Oreochromis_niloticus
ENSCPOG00000034399	-	100	76.111	ENSOANG00000011758	-	99	76.111	Ornithorhynchus_anatinus
ENSCPOG00000034399	-	100	77.778	ENSOCUG00000015500	SEPT2	99	77.778	Oryctolagus_cuniculus
ENSCPOG00000034399	-	90	71.341	ENSORLG00000004835	sept2	97	72.050	Oryzias_latipes
ENSCPOG00000034399	-	93	68.750	ENSORLG00020003263	sept2	96	68.571	Oryzias_latipes_hni
ENSCPOG00000034399	-	93	68.750	ENSORLG00015006412	sept2	96	68.571	Oryzias_latipes_hsok
ENSCPOG00000034399	-	93	71.976	ENSOMEG00000008923	sept2	95	71.513	Oryzias_melastigma
ENSCPOG00000034399	-	100	78.056	ENSOGAG00000004457	SEPT2	99	78.056	Otolemur_garnettii
ENSCPOG00000034399	-	93	72.321	ENSOARG00000017810	-	99	72.423	Ovis_aries
ENSCPOG00000034399	-	100	78.889	ENSPPAG00000034127	SEPT2	99	78.889	Pan_paniscus
ENSCPOG00000034399	-	93	77.151	ENSPPRG00000012154	SEPT2	99	77.222	Panthera_pardus
ENSCPOG00000034399	-	93	77.151	ENSPTIG00000004202	SEPT2	99	77.222	Panthera_tigris_altaica
ENSCPOG00000034399	-	100	78.889	ENSPTRG00000023481	SEPT2	99	77.285	Pan_troglodytes
ENSCPOG00000034399	-	100	78.889	ENSPANG00000007917	SEPT2	99	78.889	Papio_anubis
ENSCPOG00000034399	-	96	69.252	ENSPKIG00000002533	sept2	99	66.361	Paramormyrops_kingsleyae
ENSCPOG00000034399	-	100	74.792	ENSPSIG00000009642	SEPT2	99	75.000	Pelodiscus_sinensis
ENSCPOG00000034399	-	97	71.591	ENSPMGG00000012338	sept2	89	71.598	Periophthalmus_magnuspinnatus
ENSCPOG00000034399	-	100	78.611	ENSPEMG00000022937	-	99	78.771	Peromyscus_maniculatus_bairdii
ENSCPOG00000034399	-	100	75.833	ENSPCIG00000005866	SEPT2	99	75.988	Phascolarctos_cinereus
ENSCPOG00000034399	-	98	70.225	ENSPFOG00000017007	sept2	99	70.278	Poecilia_formosa
ENSCPOG00000034399	-	98	67.480	ENSPLAG00000003540	sept2	98	66.396	Poecilia_latipinna
ENSCPOG00000034399	-	98	67.480	ENSPMEG00000003785	sept2	98	66.396	Poecilia_mexicana
ENSCPOG00000034399	-	98	67.480	ENSPREG00000007538	sept2	100	65.689	Poecilia_reticulata
ENSCPOG00000034399	-	100	78.611	ENSPPYG00000013353	SEPT2	99	78.611	Pongo_abelii
ENSCPOG00000034399	-	86	75.949	ENSPCAG00000003337	SEPT2	100	75.949	Procavia_capensis
ENSCPOG00000034399	-	93	76.301	ENSPVAG00000000558	SEPT2	99	76.423	Pteropus_vampyrus
ENSCPOG00000034399	-	98	70.506	ENSPNYG00000000783	sept2	99	68.611	Pundamilia_nyererei
ENSCPOG00000034399	-	98	71.067	ENSPNAG00000010720	sept2	98	69.101	Pygocentrus_nattereri
ENSCPOG00000034399	-	100	78.056	ENSRNOG00000017952	Sept2	99	78.056	Rattus_norvegicus
ENSCPOG00000034399	-	100	78.611	ENSRBIG00000032420	SEPT2	91	78.611	Rhinopithecus_bieti
ENSCPOG00000034399	-	100	78.611	ENSRROG00000031700	SEPT2	99	78.611	Rhinopithecus_roxellana
ENSCPOG00000034399	-	100	78.889	ENSSBOG00000016731	SEPT2	99	78.889	Saimiri_boliviensis_boliviensis
ENSCPOG00000034399	-	100	75.833	ENSSHAG00000012877	SEPT2	99	75.833	Sarcophilus_harrisii
ENSCPOG00000034399	-	96	68.232	ENSSFOG00015018742	sept2	97	67.313	Scleropages_formosus
ENSCPOG00000034399	-	95	71.387	ENSSMAG00000007297	sept2	98	71.429	Scophthalmus_maximus
ENSCPOG00000034399	-	96	71.060	ENSSDUG00000011223	sept2	96	70.115	Seriola_dumerili
ENSCPOG00000034399	-	96	71.060	ENSSLDG00000016125	sept2	96	70.115	Seriola_lalandi_dorsalis
ENSCPOG00000034399	-	80	94.286	ENSSARG00000012133	-	75	94.286	Sorex_araneus
ENSCPOG00000034399	-	96	71.060	ENSSPAG00000001557	sept2	93	72.372	Stegastes_partitus
ENSCPOG00000034399	-	100	76.944	ENSSSCG00000016370	SEPT2	99	76.944	Sus_scrofa
ENSCPOG00000034399	-	100	75.623	ENSTGUG00000006160	SEPT2	99	75.623	Taeniopygia_guttata
ENSCPOG00000034399	-	97	70.538	ENSTRUG00000021827	sept2	98	69.602	Takifugu_rubripes
ENSCPOG00000034399	-	97	70.822	ENSTNIG00000007849	sept2	98	69.886	Tetraodon_nigroviridis
ENSCPOG00000034399	-	93	77.515	ENSUAMG00000017781	SEPT2	99	77.562	Ursus_americanus
ENSCPOG00000034399	-	93	77.745	ENSUMAG00000010525	SEPT2	99	77.778	Ursus_maritimus
ENSCPOG00000034399	-	100	77.778	ENSVVUG00000022793	-	99	77.778	Vulpes_vulpes
ENSCPOG00000034399	-	97	71.023	ENSXETG00000012166	sept2	99	71.875	Xenopus_tropicalis
ENSCPOG00000034399	-	99	62.571	ENSXCOG00000007338	sept2	98	62.139	Xiphophorus_couchianus
ENSCPOG00000034399	-	98	70.225	ENSXMAG00000004256	sept2	97	71.067	Xiphophorus_maculatus