EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000034668 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 94858 bases
Position: chrDS562862.1:9076259-9171116
Accession: 100725059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021856	La	PF05383.17	4.4e-19	1	1
ENSCPOP00000030517	La	PF05383.17	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000038618	-	699	-	ENSCPOP00000030517	232 (aa)	-	A0A286XY64
ENSCPOT00000047342	-	840	-	ENSCPOP00000021856	279 (aa)	-	A0A286X8V3
ENSCPOT00000032530	-	3865	XM_013160076	ENSCPOP00000026771	14 (aa)	-	A0A286XMP8

Gene Model

Click here to download ENSCPOG00000034668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000034668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000034668	-	93	91.964	ENSG00000138709	LARP1B	76	91.964	Homo_sapiens
ENSCPOG00000034668	-	93	97.321	ENSAMEG00000002748	LARP1B	76	97.321	Ailuropoda_melanoleuca
ENSCPOG00000034668	-	91	91.589	ENSANAG00000034618	LARP1B	73	91.589	Aotus_nancymaae
ENSCPOG00000034668	-	93	92.857	ENSCJAG00000003338	LARP1B	76	92.857	Callithrix_jacchus
ENSCPOG00000034668	-	93	96.429	ENSCAFG00020018899	LARP1B	76	96.429	Canis_lupus_dingo
ENSCPOG00000034668	-	93	95.536	ENSCHIG00000023144	LARP1B	79	95.536	Capra_hircus
ENSCPOG00000034668	-	93	93.694	ENSTSYG00000002037	-	72	93.694	Carlito_syrichta
ENSCPOG00000034668	-	93	92.793	ENSCCAG00000021948	LARP1B	76	92.793	Cebus_capucinus
ENSCPOG00000034668	-	94	89.262	ENSCATG00000013541	LARP1B	76	89.583	Cercocebus_atys
ENSCPOG00000034668	-	100	75.610	ENSCLAG00000006448	-	77	97.321	Chinchilla_lanigera
ENSCPOG00000034668	-	93	91.964	ENSCANG00000026958	LARP1B	73	91.964	Colobus_angolensis_palliatus
ENSCPOG00000034668	-	93	94.643	ENSCGRG00001004660	-	76	94.643	Cricetulus_griseus_chok1gshd
ENSCPOG00000034668	-	93	94.643	ENSCGRG00000001914	-	76	94.643	Cricetulus_griseus_crigri
ENSCPOG00000034668	-	93	96.396	ENSEASG00005018106	LARP1B	76	96.396	Equus_asinus_asinus
ENSCPOG00000034668	-	93	96.429	ENSFCAG00000014650	-	76	96.429	Felis_catus
ENSCPOG00000034668	-	93	91.071	ENSGGOG00000015900	LARP1B	76	91.071	Gorilla_gorilla
ENSCPOG00000034668	-	98	67.823	ENSHGLG00000013922	-	75	85.849	Heterocephalus_glaber_female
ENSCPOG00000034668	-	92	93.750	ENSHGLG00000006728	-	75	93.750	Heterocephalus_glaber_female
ENSCPOG00000034668	-	98	67.823	ENSHGLG00100016491	-	75	85.849	Heterocephalus_glaber_male
ENSCPOG00000034668	-	100	75.676	ENSHGLG00100014041	-	74	93.750	Heterocephalus_glaber_male
ENSCPOG00000034668	-	93	95.536	ENSSTOG00000008596	-	76	95.536	Ictidomys_tridecemlineatus
ENSCPOG00000034668	-	91	87.963	ENSSTOG00000021917	-	72	87.963	Ictidomys_tridecemlineatus
ENSCPOG00000034668	-	87	54.826	ENSSTOG00000033183	-	67	79.412	Ictidomys_tridecemlineatus
ENSCPOG00000034668	-	95	62.460	ENSSTOG00000034510	-	66	79.245	Ictidomys_tridecemlineatus
ENSCPOG00000034668	-	99	65.269	ENSJJAG00000022360	Larp1b	76	89.286	Jaculus_jaculus
ENSCPOG00000034668	-	76	78.302	ENSLACG00000015247	LARP1B	64	73.832	Latimeria_chalumnae
ENSCPOG00000034668	-	93	94.595	ENSLAFG00000008473	-	76	94.595	Loxodonta_africana
ENSCPOG00000034668	-	93	91.071	ENSMFAG00000002218	LARP1B	76	91.071	Macaca_fascicularis
ENSCPOG00000034668	-	100	69.874	ENSMFAG00000003306	-	80	86.207	Macaca_fascicularis
ENSCPOG00000034668	-	93	91.071	ENSMMUG00000021347	LARP1B	76	91.071	Macaca_mulatta
ENSCPOG00000034668	-	100	68.776	ENSMNEG00000027747	-	94	69.915	Macaca_nemestrina
ENSCPOG00000034668	-	93	93.750	ENSMAUG00000007879	-	76	93.750	Mesocricetus_auratus
ENSCPOG00000034668	-	93	95.536	ENSMICG00000036111	LARP1B	76	95.536	Microcebus_murinus
ENSCPOG00000034668	-	97	65.603	ENSMICG00000037883	-	68	84.906	Microcebus_murinus
ENSCPOG00000034668	-	97	68.858	ENSMICG00000028052	-	63	65.398	Microcebus_murinus
ENSCPOG00000034668	-	68	95.283	ENSMOCG00000001490	Larp1b	66	95.536	Microtus_ochrogaster
ENSCPOG00000034668	-	93	93.750	MGP_CAROLIEiJ_G0024962	Larp1b	76	93.750	Mus_caroli
ENSCPOG00000034668	-	93	93.750	ENSMUSG00000025762	Larp1b	76	93.750	Mus_musculus
ENSCPOG00000034668	-	90	93.750	MGP_PahariEiJ_G0026403	Larp1b	76	93.750	Mus_pahari
ENSCPOG00000034668	-	93	93.750	MGP_SPRETEiJ_G0025897	Larp1b	76	93.750	Mus_spretus
ENSCPOG00000034668	-	93	91.964	ENSNLEG00000013819	LARP1B	76	91.964	Nomascus_leucogenys
ENSCPOG00000034668	-	92	99.107	ENSODEG00000001292	-	100	75.347	Octodon_degus
ENSCPOG00000034668	-	93	91.071	ENSPPAG00000030439	LARP1B	76	91.071	Pan_paniscus
ENSCPOG00000034668	-	93	96.429	ENSPPRG00000002743	-	76	96.429	Panthera_pardus
ENSCPOG00000034668	-	93	96.429	ENSPTIG00000011225	LARP1B	76	96.429	Panthera_tigris_altaica
ENSCPOG00000034668	-	93	91.071	ENSPTRG00000016437	LARP1B	76	91.071	Pan_troglodytes
ENSCPOG00000034668	-	93	90.179	ENSPANG00000012488	LARP1B	76	90.179	Papio_anubis
ENSCPOG00000034668	-	97	63.303	ENSPCIG00000026516	LARP1B	65	91.509	Phascolarctos_cinereus
ENSCPOG00000034668	-	93	94.643	ENSPCOG00000021874	LARP1B	76	94.643	Propithecus_coquereli
ENSCPOG00000034668	-	93	94.643	ENSRNOG00000038366	Larp1b	76	94.643	Rattus_norvegicus
ENSCPOG00000034668	-	93	91.964	ENSRBIG00000039982	-	76	91.964	Rhinopithecus_bieti
ENSCPOG00000034668	-	94	87.500	ENSRBIG00000038568	-	69	87.500	Rhinopithecus_bieti
ENSCPOG00000034668	-	94	87.500	ENSRROG00000038525	-	70	87.500	Rhinopithecus_roxellana
ENSCPOG00000034668	-	93	91.964	ENSRROG00000030771	LARP1B	76	91.964	Rhinopithecus_roxellana
ENSCPOG00000034668	-	99	48.263	ENSSSCG00000040491	-	99	46.565	Sus_scrofa
ENSCPOG00000034668	-	80	97.321	ENSUAMG00000016938	-	100	69.688	Ursus_americanus