EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000034818 (Gene tree)
Gene ID: 100714048
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 17038 bases
Position: chrDS562864.1:42213555-42230592
Accession: 100714048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000021804	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000045896	RAB5B-201	4031	XM_003476200	ENSCPOP00000021804	215 (aa)	XP_003476248	A0A286X8R6

Gene Model

Click here to download ENSCPOG00000034818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000034818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000034818	RAB5B	75	44.720	ENSCPOG00000002472	RAB25	76	44.720
ENSCPOG00000034818	RAB5B	63	30.137	ENSCPOG00000000435	ARL4D	69	30.137
ENSCPOG00000034818	RAB5B	93	40.385	ENSCPOG00000025645	RAB37	95	40.385
ENSCPOG00000034818	RAB5B	75	44.720	ENSCPOG00000036631	RAB14	75	44.720
ENSCPOG00000034818	RAB5B	75	47.205	ENSCPOG00000037599	RAB11A	75	47.205
ENSCPOG00000034818	RAB5B	90	43.367	ENSCPOG00000015437	RAB1A	95	43.367
ENSCPOG00000034818	RAB5B	53	38.261	ENSCPOG00000026899	-	51	38.261
ENSCPOG00000034818	RAB5B	77	45.783	ENSCPOG00000038813	RAB6B	80	45.783
ENSCPOG00000034818	RAB5B	90	38.462	ENSCPOG00000032827	RAB18	93	38.462
ENSCPOG00000034818	RAB5B	86	41.304	ENSCPOG00000026575	RAB2B	85	41.304
ENSCPOG00000034818	RAB5B	89	38.860	ENSCPOG00000011491	-	95	38.860
ENSCPOG00000034818	RAB5B	83	37.705	ENSCPOG00000000119	RAB33A	77	37.705
ENSCPOG00000034818	RAB5B	83	30.556	ENSCPOG00000021833	Nras	85	32.515
ENSCPOG00000034818	RAB5B	93	34.804	ENSCPOG00000030676	RAB9A	99	34.804
ENSCPOG00000034818	RAB5B	62	30.282	ENSCPOG00000031098	ARL8B	73	30.282
ENSCPOG00000034818	RAB5B	91	43.204	ENSCPOG00000030154	RAB11B	94	43.204
ENSCPOG00000034818	RAB5B	76	32.727	ENSCPOG00000030290	KRAS	90	31.579
ENSCPOG00000034818	RAB5B	82	38.462	ENSCPOG00000030742	RAB33B	79	38.462
ENSCPOG00000034818	RAB5B	74	37.500	ENSCPOG00000030218	RAB23	67	37.500
ENSCPOG00000034818	RAB5B	82	33.333	ENSCPOG00000031743	RHEB	93	33.333
ENSCPOG00000034818	RAB5B	78	42.442	ENSCPOG00000034570	RAB7A	83	42.442
ENSCPOG00000034818	RAB5B	90	47.423	ENSCPOG00000008172	RAB22A	98	47.423
ENSCPOG00000034818	RAB5B	79	36.257	ENSCPOG00000022689	RAB12	81	36.257
ENSCPOG00000034818	RAB5B	82	32.787	ENSCPOG00000000101	HRAS	96	32.787
ENSCPOG00000034818	RAB5B	78	35.882	ENSCPOG00000039524	RAB39B	80	35.882
ENSCPOG00000034818	RAB5B	82	45.198	ENSCPOG00000014868	RAB1B	87	45.198
ENSCPOG00000034818	RAB5B	90	30.102	ENSCPOG00000000528	RERG	96	30.102
ENSCPOG00000034818	RAB5B	78	42.857	ENSCPOG00000005047	RAB30	83	42.857
ENSCPOG00000034818	RAB5B	90	40.000	ENSCPOG00000039323	RAB24	96	41.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000034818	RAB5B	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSCPOG00000034818	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSCPOG00000034818	RAB5B	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSCPOG00000034818	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSCPOG00000034818	RAB5B	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSCPOG00000034818	RAB5B	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSCPOG00000034818	RAB5B	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSCPOG00000034818	RAB5B	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSCPOG00000034818	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSCPOG00000034818	RAB5B	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSCPOG00000034818	RAB5B	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSCPOG00000034818	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSCPOG00000034818	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSCPOG00000034818	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSCPOG00000034818	RAB5B	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSCPOG00000034818	RAB5B	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSCPOG00000034818	RAB5B	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSCPOG00000034818	RAB5B	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSCPOG00000034818	RAB5B	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSCPOG00000034818	RAB5B	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSCPOG00000034818	RAB5B	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSCPOG00000034818	RAB5B	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSCPOG00000034818	RAB5B	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSCPOG00000034818	RAB5B	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSCPOG00000034818	RAB5B	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSCPOG00000034818	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSCPOG00000034818	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSCPOG00000034818	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSCPOG00000034818	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSCPOG00000034818	RAB5B	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSCPOG00000034818	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSCPOG00000034818	RAB5B	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSCPOG00000034818	RAB5B	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSCPOG00000034818	RAB5B	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSCPOG00000034818	RAB5B	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSCPOG00000034818	RAB5B	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSCPOG00000034818	RAB5B	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSCPOG00000034818	RAB5B	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSCPOG00000034818	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSCPOG00000034818	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSCPOG00000034818	RAB5B	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSCPOG00000034818	RAB5B	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSCPOG00000034818	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSCPOG00000034818	RAB5B	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSCPOG00000034818	RAB5B	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSCPOG00000034818	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSCPOG00000034818	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSCPOG00000034818	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSCPOG00000034818	RAB5B	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSCPOG00000034818	RAB5B	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSCPOG00000034818	RAB5B	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSCPOG00000034818	RAB5B	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSCPOG00000034818	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSCPOG00000034818	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSCPOG00000034818	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes