EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000035170 (Gene tree)
Gene ID: 100732374
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 11532 bases
Position: chrDS562900.1:2405472-2417003
Accession: 100732374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000024637	RRM_1	PF00076.22	6.8e-30	1	3
ENSCPOP00000024637	RRM_1	PF00076.22	6.8e-30	2	3
ENSCPOP00000024637	RRM_1	PF00076.22	6.8e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035946	RBM12-201	3723	XM_013150269	ENSCPOP00000024637	998 (aa)	XP_013005723	A0A286XGT1

Gene Model

Click here to download ENSCPOG00000035170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000035170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000035170	RBM12	52	71.264	ENSCPOG00000007815	RBM12B	54	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000035170	RBM12	100	93.909	ENSG00000244462	RBM12	100	98.507	Homo_sapiens
ENSCPOG00000035170	RBM12	97	96.108	ENSAMEG00000019189	RBM12	100	82.182	Ailuropoda_melanoleuca
ENSCPOG00000035170	RBM12	90	81.250	ENSACAG00000006330	RBM12	98	67.735	Anolis_carolinensis
ENSCPOG00000035170	RBM12	100	94.009	ENSANAG00000032596	RBM12	98	81.300	Aotus_nancymaae
ENSCPOG00000035170	RBM12	100	89.579	ENSBTAG00000044015	RBM12	100	89.679	Bos_taurus
ENSCPOG00000035170	RBM12	90	96.631	ENSCAFG00000008256	RBM12	98	96.631	Canis_familiaris
ENSCPOG00000035170	RBM12	89	96.206	ENSCAFG00020005650	RBM12	100	78.895	Canis_lupus_dingo
ENSCPOG00000035170	RBM12	99	94.684	ENSCHIG00000024592	RBM12	100	81.500	Capra_hircus
ENSCPOG00000035170	RBM12	95	94.970	ENSTSYG00000030563	RBM12	98	78.400	Carlito_syrichta
ENSCPOG00000035170	RBM12	85	100.000	ENSCAPG00000006176	RBM12	96	100.000	Cavia_aperea
ENSCPOG00000035170	RBM12	88	87.629	ENSCCAG00000035899	-	100	65.534	Cebus_capucinus
ENSCPOG00000035170	RBM12	96	91.831	ENSCCAG00000036056	-	98	76.151	Cebus_capucinus
ENSCPOG00000035170	RBM12	100	93.484	ENSCATG00000030934	RBM12	98	87.588	Cercocebus_atys
ENSCPOG00000035170	RBM12	100	93.487	ENSCLAG00000017230	RBM12	100	93.687	Chinchilla_lanigera
ENSCPOG00000035170	RBM12	100	93.581	ENSCANG00000030552	RBM12	98	85.271	Colobus_angolensis_palliatus
ENSCPOG00000035170	RBM12	100	89.279	ENSCGRG00001021144	Rbm12	100	88.978	Cricetulus_griseus_chok1gshd
ENSCPOG00000035170	RBM12	100	89.279	ENSCGRG00000012719	Rbm12	100	88.978	Cricetulus_griseus_crigri
ENSCPOG00000035170	RBM12	100	85.060	ENSDORG00000000606	-	100	85.185	Dipodomys_ordii
ENSCPOG00000035170	RBM12	99	93.614	ENSDORG00000028509	-	100	91.391	Dipodomys_ordii
ENSCPOG00000035170	RBM12	50	66.412	ENSEBUG00000016806	rbm12	87	66.412	Eptatretus_burgeri
ENSCPOG00000035170	RBM12	100	94.294	ENSECAG00000021997	RBM12	100	81.918	Equus_caballus
ENSCPOG00000035170	RBM12	59	94.118	ENSEEUG00000008858	-	50	94.118	Erinaceus_europaeus
ENSCPOG00000035170	RBM12	90	75.269	ENSFALG00000012516	RBM12	50	91.111	Ficedula_albicollis
ENSCPOG00000035170	RBM12	100	93.390	ENSFDAG00000014663	RBM12	100	89.880	Fukomys_damarensis
ENSCPOG00000035170	RBM12	90	84.356	ENSGALG00000030253	RBM12	100	70.160	Gallus_gallus
ENSCPOG00000035170	RBM12	100	93.626	ENSGGOG00000028500	RBM12	98	87.688	Gorilla_gorilla
ENSCPOG00000035170	RBM12	100	94.579	ENSHGLG00000013208	RBM12	100	91.884	Heterocephalus_glaber_female
ENSCPOG00000035170	RBM12	84	97.022	ENSHGLG00100019158	RBM12	90	97.022	Heterocephalus_glaber_male
ENSCPOG00000035170	RBM12	100	87.876	ENSSTOG00000019739	RBM12	100	88.076	Ictidomys_tridecemlineatus
ENSCPOG00000035170	RBM12	100	93.353	ENSLAFG00000010341	RBM12	100	87.575	Loxodonta_africana
ENSCPOG00000035170	RBM12	100	93.626	ENSMFAG00000032583	RBM12	98	87.788	Macaca_fascicularis
ENSCPOG00000035170	RBM12	100	93.626	ENSMMUG00000020960	CPNE1	100	87.688	Macaca_mulatta
ENSCPOG00000035170	RBM12	100	93.626	ENSMNEG00000045365	RBM12	98	87.688	Macaca_nemestrina
ENSCPOG00000035170	RBM12	100	93.626	ENSMLEG00000032492	RBM12	98	87.688	Mandrillus_leucophaeus
ENSCPOG00000035170	RBM12	90	84.663	ENSMGAG00000001502	RBM12	100	69.596	Meleagris_gallopavo
ENSCPOG00000035170	RBM12	100	90.310	ENSMAUG00000012800	Rbm12	100	90.010	Mesocricetus_auratus
ENSCPOG00000035170	RBM12	76	83.612	ENSMICG00000029540	-	74	83.566	Microcebus_murinus
ENSCPOG00000035170	RBM12	93	95.751	ENSMICG00000032761	-	98	79.379	Microcebus_murinus
ENSCPOG00000035170	RBM12	100	88.811	ENSMOCG00000012950	Rbm12	100	88.511	Microtus_ochrogaster
ENSCPOG00000035170	RBM12	90	90.549	ENSMODG00000001591	RBM12	98	90.549	Monodelphis_domestica
ENSCPOG00000035170	RBM12	100	87.660	MGP_CAROLIEiJ_G0024551	Rbm12	100	88.055	Mus_caroli
ENSCPOG00000035170	RBM12	100	87.103	ENSMUSG00000089824	Rbm12	100	88.377	Mus_musculus
ENSCPOG00000035170	RBM12	100	87.858	MGP_PahariEiJ_G0025996	Rbm12	100	88.055	Mus_pahari
ENSCPOG00000035170	RBM12	100	87.033	MGP_SPRETEiJ_G0025473	Rbm12	100	88.294	Mus_spretus
ENSCPOG00000035170	RBM12	99	93.544	ENSMPUG00000017789	-	100	88.277	Mustela_putorius_furo
ENSCPOG00000035170	RBM12	100	93.438	ENSMLUG00000011217	RBM12	98	81.400	Myotis_lucifugus
ENSCPOG00000035170	RBM12	100	90.681	ENSNGAG00000015846	Rbm12	100	90.681	Nannospalax_galili
ENSCPOG00000035170	RBM12	100	93.909	ENSNLEG00000010268	RBM12	98	85.571	Nomascus_leucogenys
ENSCPOG00000035170	RBM12	90	89.939	ENSMEUG00000007621	RBM12	73	88.783	Notamacropus_eugenii
ENSCPOG00000035170	RBM12	100	85.786	ENSOPRG00000005687	RBM12	100	86.473	Ochotona_princeps
ENSCPOG00000035170	RBM12	100	89.107	ENSODEG00000013870	RBM12	100	90.088	Octodon_degus
ENSCPOG00000035170	RBM12	100	93.909	ENSPPAG00000040719	RBM12	98	87.888	Pan_paniscus
ENSCPOG00000035170	RBM12	100	93.909	ENSPTRG00000013446	RBM12	98	87.888	Pan_troglodytes
ENSCPOG00000035170	RBM12	100	93.909	ENSPTRG00000040708	-	98	87.888	Pan_troglodytes
ENSCPOG00000035170	RBM12	100	93.626	ENSPANG00000020003	CPNE1	98	87.688	Papio_anubis
ENSCPOG00000035170	RBM12	83	85.077	ENSPSIG00000007369	RBM12	98	84.923	Pelodiscus_sinensis
ENSCPOG00000035170	RBM12	100	89.484	ENSPEMG00000017769	Rbm12	100	89.187	Peromyscus_maniculatus_bairdii
ENSCPOG00000035170	RBM12	56	79.365	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSCPOG00000035170	RBM12	100	94.009	ENSPPYG00000010960	RBM12	100	88.689	Pongo_abelii
ENSCPOG00000035170	RBM12	98	91.822	ENSPCAG00000008653	RBM12	100	79.100	Procavia_capensis
ENSCPOG00000035170	RBM12	99	94.684	ENSPCOG00000023724	RBM12	98	81.682	Propithecus_coquereli
ENSCPOG00000035170	RBM12	100	94.151	ENSPVAG00000014937	RBM12	100	81.600	Pteropus_vampyrus
ENSCPOG00000035170	RBM12	71	91.631	ENSRNOG00000019723	Rbm12	100	85.934	Rattus_norvegicus
ENSCPOG00000035170	RBM12	71	91.631	ENSRNOG00000049913	LOC100910990	100	85.934	Rattus_norvegicus
ENSCPOG00000035170	RBM12	100	93.866	ENSRBIG00000042965	RBM12	98	85.471	Rhinopithecus_bieti
ENSCPOG00000035170	RBM12	100	93.866	ENSRROG00000037485	RBM12	98	85.471	Rhinopithecus_roxellana
ENSCPOG00000035170	RBM12	100	93.723	ENSSBOG00000027633	RBM12	98	79.761	Saimiri_boliviensis_boliviensis
ENSCPOG00000035170	RBM12	90	90.549	ENSSHAG00000018585	RBM12	100	90.549	Sarcophilus_harrisii
ENSCPOG00000035170	RBM12	100	88.377	ENSSSCG00000036156	RBM12	100	88.978	Sus_scrofa
ENSCPOG00000035170	RBM12	89	84.992	ENSTGUG00000003002	RBM12	100	84.756	Taeniopygia_guttata
ENSCPOG00000035170	RBM12	100	94.722	ENSTTRG00000017035	RBM12	100	82.000	Tursiops_truncatus
ENSCPOG00000035170	RBM12	96	95.542	ENSUAMG00000010430	RBM12	100	82.300	Ursus_americanus
ENSCPOG00000035170	RBM12	88	100.000	ENSVPAG00000003812	RBM12	90	100.000	Vicugna_pacos
ENSCPOG00000035170	RBM12	88	65.204	ENSXETG00000033541	RBM12	71	62.740	Xenopus_tropicalis