EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000035563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 1302 bases
Position: chrDS563031.1:878328-879629
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	1	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	2	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	3	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	4	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	5	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	6	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	7	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	8	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	9	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	10	11
ENSCPOP00000026346	zf-C2H2	PF00096.26	7.5e-65	11	11
ENSCPOP00000026346	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000037092	-	1224	-	ENSCPOP00000026346	407 (aa)	-	A0A286XLG0

Gene Model

Click here to download ENSCPOG00000035563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000035563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000035563	-	99	44.534	ENSCPOG00000007108	ZNF202	50	44.534
ENSCPOG00000035563	-	90	46.324	ENSCPOG00000003954	ZNF317	67	46.027
ENSCPOG00000035563	-	89	56.250	ENSCPOG00000033345	-	97	56.250
ENSCPOG00000035563	-	89	52.586	ENSCPOG00000034004	-	89	52.586
ENSCPOG00000035563	-	90	51.293	ENSCPOG00000000634	ZFP1	80	51.293
ENSCPOG00000035563	-	95	31.579	ENSCPOG00000034707	ZNF646	74	32.195
ENSCPOG00000035563	-	98	47.330	ENSCPOG00000031196	ZNF81	68	51.735
ENSCPOG00000035563	-	88	52.190	ENSCPOG00000005238	ZNF768	53	51.373
ENSCPOG00000035563	-	99	50.144	ENSCPOG00000036704	-	89	50.144
ENSCPOG00000035563	-	75	40.000	ENSCPOG00000030326	-	67	40.000
ENSCPOG00000035563	-	85	48.696	ENSCPOG00000012883	PRDM5	84	48.696
ENSCPOG00000035563	-	86	39.130	ENSCPOG00000039249	ZNF784	66	39.130
ENSCPOG00000035563	-	88	41.818	ENSCPOG00000033449	-	56	41.818
ENSCPOG00000035563	-	96	37.037	ENSCPOG00000000162	ZNF423	97	37.037
ENSCPOG00000035563	-	89	52.027	ENSCPOG00000032242	-	69	52.027
ENSCPOG00000035563	-	96	53.390	ENSCPOG00000039731	ZNF235	70	53.390
ENSCPOG00000035563	-	98	54.369	ENSCPOG00000034791	-	79	54.369
ENSCPOG00000035563	-	86	52.299	ENSCPOG00000035016	ZNF112	84	52.299
ENSCPOG00000035563	-	91	45.614	ENSCPOG00000040579	ZNF865	80	37.838
ENSCPOG00000035563	-	89	56.299	ENSCPOG00000035126	ZNF2	63	55.859
ENSCPOG00000035563	-	86	36.620	ENSCPOG00000000780	ZNF574	93	43.802
ENSCPOG00000035563	-	89	53.216	ENSCPOG00000040740	ZNF226	76	53.216
ENSCPOG00000035563	-	86	41.818	ENSCPOG00000002374	ZIC3	66	41.818
ENSCPOG00000035563	-	85	33.068	ENSCPOG00000034474	ZNF526	80	33.939
ENSCPOG00000035563	-	90	42.697	ENSCPOG00000008424	ZNF236	67	43.210
ENSCPOG00000035563	-	76	40.698	ENSCPOG00000006564	SALL1	60	33.962
ENSCPOG00000035563	-	74	39.506	ENSCPOG00000010143	GTF3A	82	39.506
ENSCPOG00000035563	-	89	37.766	ENSCPOG00000030357	ZNF319	87	38.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000035563	-	100	99.263	ENSCAPG00000006920	-	100	99.263	Cavia_aperea
ENSCPOG00000035563	-	98	84.428	ENSCATG00000031926	ZNF454	77	84.428	Cercocebus_atys
ENSCPOG00000035563	-	100	88.350	ENSCLAG00000010195	-	99	89.320	Chinchilla_lanigera
ENSCPOG00000035563	-	100	80.523	ENSCGRG00001013939	Zfp454	79	80.523	Cricetulus_griseus_chok1gshd
ENSCPOG00000035563	-	100	80.523	ENSCGRG00000014813	Zfp454	79	80.523	Cricetulus_griseus_crigri
ENSCPOG00000035563	-	98	85.575	ENSEASG00005012616	ZNF454	84	85.575	Equus_asinus_asinus
ENSCPOG00000035563	-	98	82.641	ENSEEUG00000007684	ZNF454	79	82.641	Erinaceus_europaeus
ENSCPOG00000035563	-	98	84.915	ENSMFAG00000043337	ZNF454	77	84.915	Macaca_fascicularis
ENSCPOG00000035563	-	98	84.915	ENSMMUG00000045647	ZNF454	77	84.915	Macaca_mulatta
ENSCPOG00000035563	-	98	84.915	ENSMNEG00000002699	ZNF454	77	84.915	Macaca_nemestrina
ENSCPOG00000035563	-	98	84.428	ENSMLEG00000039955	ZNF454	77	84.428	Mandrillus_leucophaeus
ENSCPOG00000035563	-	100	79.524	ENSMUSG00000048728	Zfp454	99	79.524	Mus_musculus
ENSCPOG00000035563	-	98	84.352	ENSMLUG00000002894	ZNF454	79	84.352	Myotis_lucifugus
ENSCPOG00000035563	-	98	84.672	ENSPANG00000009509	ZNF454	77	84.672	Papio_anubis
ENSCPOG00000035563	-	98	83.863	ENSSSCG00000027351	ZNF454	77	83.863	Sus_scrofa
ENSCPOG00000035563	-	98	85.821	ENSUAMG00000026246	ZNF454	92	85.821	Ursus_americanus
ENSCPOG00000035563	-	98	85.821	ENSUMAG00000023930	ZNF454	81	85.821	Ursus_maritimus
ENSCPOG00000035563	-	99	82.742	ENSVVUG00000001267	ZNF454	69	82.742	Vulpes_vulpes