EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000035657 (Gene tree)
Gene ID: 100715268
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 42003 bases
Position: chrDS563110.1:236834-278836
Accession: 100715268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000025960	Exo_endo_phos	PF03372.23	9.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000047069	CNOT6-201	1605	XM_004999346	ENSCPOP00000025960	534 (aa)	XP_004999403	A0A286XKC9

Gene Model

Click here to download ENSCPOG00000035657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000035657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000035657	CNOT6	85	89.474	ENSCPOG00000010337	CNOT6L	99	89.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000035657	CNOT6	100	92.101	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSCPOG00000035657	CNOT6	100	82.111	ENSAPOG00000009994	cnot6b	100	82.111	Acanthochromis_polyacanthus
ENSCPOG00000035657	CNOT6	100	92.487	ENSAMEG00000000949	CNOT6	99	92.487	Ailuropoda_melanoleuca
ENSCPOG00000035657	CNOT6	100	80.859	ENSACIG00000016566	cnot6b	100	80.859	Amphilophus_citrinellus
ENSCPOG00000035657	CNOT6	100	82.111	ENSAOCG00000006893	cnot6b	100	82.111	Amphiprion_ocellaris
ENSCPOG00000035657	CNOT6	100	82.111	ENSAPEG00000016949	cnot6b	100	82.111	Amphiprion_percula
ENSCPOG00000035657	CNOT6	100	80.322	ENSATEG00000007862	cnot6b	100	80.322	Anabas_testudineus
ENSCPOG00000035657	CNOT6	100	90.664	ENSAPLG00000012715	CNOT6	99	90.664	Anas_platyrhynchos
ENSCPOG00000035657	CNOT6	100	88.869	ENSACAG00000016548	CNOT6	100	88.869	Anolis_carolinensis
ENSCPOG00000035657	CNOT6	100	92.460	ENSANAG00000030436	CNOT6	96	92.460	Aotus_nancymaae
ENSCPOG00000035657	CNOT6	100	80.322	ENSACLG00000008279	cnot6b	100	81.216	Astatotilapia_calliptera
ENSCPOG00000035657	CNOT6	100	80.466	ENSAMXG00000034694	cnot6b	100	80.466	Astyanax_mexicanus
ENSCPOG00000035657	CNOT6	100	82.079	ENSAMXG00000019140	cnot6a	100	82.079	Astyanax_mexicanus
ENSCPOG00000035657	CNOT6	100	92.460	ENSBTAG00000017362	CNOT6	100	92.460	Bos_taurus
ENSCPOG00000035657	CNOT6	100	92.280	ENSCJAG00000009795	CNOT6	100	92.280	Callithrix_jacchus
ENSCPOG00000035657	CNOT6	100	92.819	ENSCAFG00000000464	CNOT6	100	92.819	Canis_familiaris
ENSCPOG00000035657	CNOT6	100	92.819	ENSCAFG00020002441	CNOT6	100	92.819	Canis_lupus_dingo
ENSCPOG00000035657	CNOT6	100	92.101	ENSCHIG00000019100	CNOT6	100	92.101	Capra_hircus
ENSCPOG00000035657	CNOT6	100	91.023	ENSTSYG00000003982	CNOT6	100	91.023	Carlito_syrichta
ENSCPOG00000035657	CNOT6	100	88.510	ENSCCAG00000033670	CNOT6	100	88.510	Cebus_capucinus
ENSCPOG00000035657	CNOT6	100	92.101	ENSCATG00000042014	CNOT6	100	92.101	Cercocebus_atys
ENSCPOG00000035657	CNOT6	100	94.794	ENSCLAG00000010489	CNOT6	100	94.794	Chinchilla_lanigera
ENSCPOG00000035657	CNOT6	100	92.101	ENSCSAG00000008165	CNOT6	100	92.101	Chlorocebus_sabaeus
ENSCPOG00000035657	CNOT6	100	90.844	ENSCHOG00000009680	CNOT6	100	90.844	Choloepus_hoffmanni
ENSCPOG00000035657	CNOT6	100	90.305	ENSCPBG00000008908	CNOT6	100	90.305	Chrysemys_picta_bellii
ENSCPOG00000035657	CNOT6	100	92.101	ENSCANG00000026756	CNOT6	100	92.101	Colobus_angolensis_palliatus
ENSCPOG00000035657	CNOT6	100	91.203	ENSCGRG00001011452	Cnot6	100	91.203	Cricetulus_griseus_chok1gshd
ENSCPOG00000035657	CNOT6	100	89.587	ENSCGRG00000010407	Cnot6	100	89.587	Cricetulus_griseus_crigri
ENSCPOG00000035657	CNOT6	100	81.216	ENSCSEG00000010939	cnot6b	100	81.216	Cynoglossus_semilaevis
ENSCPOG00000035657	CNOT6	100	81.183	ENSCVAG00000010538	cnot6b	100	81.183	Cyprinodon_variegatus
ENSCPOG00000035657	CNOT6	100	79.570	ENSDARG00000101072	cnot6b	100	79.570	Danio_rerio
ENSCPOG00000035657	CNOT6	100	81.362	ENSDARG00000008255	cnot6a	100	81.362	Danio_rerio
ENSCPOG00000035657	CNOT6	100	91.741	ENSDNOG00000041644	CNOT6	100	91.741	Dasypus_novemcinctus
ENSCPOG00000035657	CNOT6	100	82.975	ENSDORG00000001708	Cnot6	100	82.975	Dipodomys_ordii
ENSCPOG00000035657	CNOT6	90	84.328	ENSETEG00000006975	CNOT6	87	84.328	Echinops_telfairi
ENSCPOG00000035657	CNOT6	89	86.600	ENSEASG00005012957	-	99	86.600	Equus_asinus_asinus
ENSCPOG00000035657	CNOT6	100	92.280	ENSEASG00005012794	-	100	92.280	Equus_asinus_asinus
ENSCPOG00000035657	CNOT6	100	89.279	ENSECAG00000012704	-	99	89.279	Equus_caballus
ENSCPOG00000035657	CNOT6	100	92.998	ENSECAG00000019325	CNOT6	100	92.998	Equus_caballus
ENSCPOG00000035657	CNOT6	100	92.101	ENSEEUG00000015382	CNOT6	100	92.101	Erinaceus_europaeus
ENSCPOG00000035657	CNOT6	100	77.778	ENSELUG00000024580	cnot6a	100	77.778	Esox_lucius
ENSCPOG00000035657	CNOT6	100	79.012	ENSELUG00000015981	cnot6b	99	79.012	Esox_lucius
ENSCPOG00000035657	CNOT6	100	92.998	ENSFCAG00000001881	CNOT6	100	92.998	Felis_catus
ENSCPOG00000035657	CNOT6	100	90.844	ENSFALG00000007699	CNOT6	100	90.844	Ficedula_albicollis
ENSCPOG00000035657	CNOT6	100	94.434	ENSFDAG00000001999	CNOT6	100	94.434	Fukomys_damarensis
ENSCPOG00000035657	CNOT6	73	88.095	ENSFHEG00000013756	cnot6b	94	92.308	Fundulus_heteroclitus
ENSCPOG00000035657	CNOT6	95	80.151	ENSGMOG00000009767	cnot6b	99	80.151	Gadus_morhua
ENSCPOG00000035657	CNOT6	100	90.844	ENSGALG00000034316	CNOT6	100	90.844	Gallus_gallus
ENSCPOG00000035657	CNOT6	100	81.004	ENSGAFG00000008525	cnot6b	100	81.004	Gambusia_affinis
ENSCPOG00000035657	CNOT6	95	78.639	ENSGACG00000018046	cnot6b	99	78.639	Gasterosteus_aculeatus
ENSCPOG00000035657	CNOT6	100	80.899	ENSGAGG00000012176	CNOT6	100	80.899	Gopherus_agassizii
ENSCPOG00000035657	CNOT6	100	92.101	ENSGGOG00000003675	CNOT6	100	92.101	Gorilla_gorilla
ENSCPOG00000035657	CNOT6	100	80.501	ENSHBUG00000002819	cnot6b	100	81.395	Haplochromis_burtoni
ENSCPOG00000035657	CNOT6	100	94.973	ENSHGLG00000017756	CNOT6	100	94.973	Heterocephalus_glaber_female
ENSCPOG00000035657	CNOT6	100	94.973	ENSHGLG00100005747	CNOT6	100	94.973	Heterocephalus_glaber_male
ENSCPOG00000035657	CNOT6	100	79.249	ENSHCOG00000016176	cnot6b	100	80.143	Hippocampus_comes
ENSCPOG00000035657	CNOT6	100	80.108	ENSIPUG00000017482	cnot6b	100	80.108	Ictalurus_punctatus
ENSCPOG00000035657	CNOT6	100	80.824	ENSIPUG00000019831	cnot6a	100	80.824	Ictalurus_punctatus
ENSCPOG00000035657	CNOT6	100	92.639	ENSSTOG00000002803	CNOT6	100	92.639	Ictidomys_tridecemlineatus
ENSCPOG00000035657	CNOT6	100	91.562	ENSJJAG00000012296	Cnot6	100	91.562	Jaculus_jaculus
ENSCPOG00000035657	CNOT6	100	81.900	ENSKMAG00000004640	cnot6b	100	81.900	Kryptolebias_marmoratus
ENSCPOG00000035657	CNOT6	100	79.428	ENSLBEG00000027917	cnot6b	100	80.322	Labrus_bergylta
ENSCPOG00000035657	CNOT6	100	85.125	ENSLOCG00000010102	cnot6b	99	85.125	Lepisosteus_oculatus
ENSCPOG00000035657	CNOT6	100	92.460	ENSLAFG00000016742	CNOT6	100	92.460	Loxodonta_africana
ENSCPOG00000035657	CNOT6	100	92.101	ENSMFAG00000030867	CNOT6	100	92.101	Macaca_fascicularis
ENSCPOG00000035657	CNOT6	100	92.101	ENSMMUG00000018690	CNOT6	100	92.101	Macaca_mulatta
ENSCPOG00000035657	CNOT6	100	92.101	ENSMNEG00000038565	CNOT6	100	92.101	Macaca_nemestrina
ENSCPOG00000035657	CNOT6	100	92.101	ENSMLEG00000010555	CNOT6	100	92.101	Mandrillus_leucophaeus
ENSCPOG00000035657	CNOT6	100	82.290	ENSMAMG00000007515	cnot6b	100	82.290	Mastacembelus_armatus
ENSCPOG00000035657	CNOT6	100	80.322	ENSMZEG00005012899	cnot6b	100	81.216	Maylandia_zebra
ENSCPOG00000035657	CNOT6	100	92.280	ENSMAUG00000019798	Cnot6	100	92.280	Mesocricetus_auratus
ENSCPOG00000035657	CNOT6	100	90.485	ENSMICG00000013018	-	100	90.485	Microcebus_murinus
ENSCPOG00000035657	CNOT6	98	82.169	ENSMICG00000028378	-	99	82.169	Microcebus_murinus
ENSCPOG00000035657	CNOT6	100	92.280	ENSMOCG00000021662	Cnot6	100	92.280	Microtus_ochrogaster
ENSCPOG00000035657	CNOT6	100	79.211	ENSMMOG00000003227	cnot6b	100	79.211	Mola_mola
ENSCPOG00000035657	CNOT6	100	90.844	ENSMODG00000003979	CNOT6	100	90.844	Monodelphis_domestica
ENSCPOG00000035657	CNOT6	100	81.932	ENSMALG00000014251	cnot6b	100	81.932	Monopterus_albus
ENSCPOG00000035657	CNOT6	100	92.460	MGP_CAROLIEiJ_G0016277	Cnot6	100	92.460	Mus_caroli
ENSCPOG00000035657	CNOT6	100	92.460	ENSMUSG00000020362	Cnot6	100	92.460	Mus_musculus
ENSCPOG00000035657	CNOT6	100	92.460	MGP_PahariEiJ_G0017413	Cnot6	100	92.460	Mus_pahari
ENSCPOG00000035657	CNOT6	100	92.280	MGP_SPRETEiJ_G0017122	Cnot6	100	92.280	Mus_spretus
ENSCPOG00000035657	CNOT6	100	92.639	ENSMPUG00000000587	CNOT6	96	92.639	Mustela_putorius_furo
ENSCPOG00000035657	CNOT6	100	90.747	ENSMLUG00000010257	CNOT6	100	90.747	Myotis_lucifugus
ENSCPOG00000035657	CNOT6	100	91.741	ENSNGAG00000008269	Cnot6	100	91.741	Nannospalax_galili
ENSCPOG00000035657	CNOT6	100	80.501	ENSNBRG00000010798	cnot6b	100	81.395	Neolamprologus_brichardi
ENSCPOG00000035657	CNOT6	100	90.664	ENSNLEG00000002322	CNOT6	100	90.664	Nomascus_leucogenys
ENSCPOG00000035657	CNOT6	80	94.860	ENSMEUG00000000025	CNOT6	77	94.860	Notamacropus_eugenii
ENSCPOG00000035657	CNOT6	87	92.857	ENSOPRG00000008244	-	88	92.857	Ochotona_princeps
ENSCPOG00000035657	CNOT6	100	94.075	ENSODEG00000007041	CNOT6	100	94.075	Octodon_degus
ENSCPOG00000035657	CNOT6	74	79.905	ENSONIG00000013027	cnot6b	99	79.905	Oreochromis_niloticus
ENSCPOG00000035657	CNOT6	100	89.946	ENSOANG00000010226	CNOT6	100	89.946	Ornithorhynchus_anatinus
ENSCPOG00000035657	CNOT6	100	91.055	ENSOCUG00000011083	CNOT6	100	91.055	Oryctolagus_cuniculus
ENSCPOG00000035657	CNOT6	100	80.859	ENSORLG00000005059	cnot6b	100	80.859	Oryzias_latipes
ENSCPOG00000035657	CNOT6	100	80.859	ENSORLG00020012784	cnot6b	100	80.859	Oryzias_latipes_hni
ENSCPOG00000035657	CNOT6	93	79.732	ENSORLG00015022658	cnot6b	98	79.732	Oryzias_latipes_hsok
ENSCPOG00000035657	CNOT6	100	81.216	ENSOMEG00000005295	cnot6b	100	81.216	Oryzias_melastigma
ENSCPOG00000035657	CNOT6	93	91.412	ENSOGAG00000032470	CNOT6	100	91.412	Otolemur_garnettii
ENSCPOG00000035657	CNOT6	97	91.697	ENSOARG00000001003	CNOT6	100	91.697	Ovis_aries
ENSCPOG00000035657	CNOT6	100	92.101	ENSPPAG00000032253	CNOT6	100	92.101	Pan_paniscus
ENSCPOG00000035657	CNOT6	100	92.819	ENSPPRG00000011912	CNOT6	100	92.819	Panthera_pardus
ENSCPOG00000035657	CNOT6	100	92.819	ENSPTIG00000016794	CNOT6	100	92.819	Panthera_tigris_altaica
ENSCPOG00000035657	CNOT6	100	92.101	ENSPTRG00000017636	CNOT6	100	92.101	Pan_troglodytes
ENSCPOG00000035657	CNOT6	100	92.101	ENSPANG00000016191	CNOT6	100	92.101	Papio_anubis
ENSCPOG00000035657	CNOT6	100	82.079	ENSPKIG00000021368	cnot6b	100	82.079	Paramormyrops_kingsleyae
ENSCPOG00000035657	CNOT6	98	90.257	ENSPSIG00000017307	CNOT6	100	90.257	Pelodiscus_sinensis
ENSCPOG00000035657	CNOT6	100	80.859	ENSPMGG00000011238	cnot6b	100	80.859	Periophthalmus_magnuspinnatus
ENSCPOG00000035657	CNOT6	100	91.562	ENSPEMG00000000627	Cnot6	100	91.562	Peromyscus_maniculatus_bairdii
ENSCPOG00000035657	CNOT6	100	90.844	ENSPCIG00000020319	CNOT6	99	90.844	Phascolarctos_cinereus
ENSCPOG00000035657	CNOT6	100	81.004	ENSPFOG00000006291	cnot6b	100	81.004	Poecilia_formosa
ENSCPOG00000035657	CNOT6	100	77.419	ENSPLAG00000008266	cnot6b	100	77.419	Poecilia_latipinna
ENSCPOG00000035657	CNOT6	100	81.183	ENSPMEG00000009091	cnot6b	100	81.183	Poecilia_mexicana
ENSCPOG00000035657	CNOT6	100	79.928	ENSPREG00000003713	cnot6b	100	79.928	Poecilia_reticulata
ENSCPOG00000035657	CNOT6	100	92.101	ENSPPYG00000016137	CNOT6	100	92.101	Pongo_abelii
ENSCPOG00000035657	CNOT6	74	95.489	ENSPCAG00000005599	-	54	100.000	Procavia_capensis
ENSCPOG00000035657	CNOT6	100	87.074	ENSPCOG00000017359	CNOT6	100	87.792	Propithecus_coquereli
ENSCPOG00000035657	CNOT6	100	88.151	ENSPVAG00000003069	CNOT6	100	88.151	Pteropus_vampyrus
ENSCPOG00000035657	CNOT6	100	80.143	ENSPNYG00000000321	cnot6b	100	81.038	Pundamilia_nyererei
ENSCPOG00000035657	CNOT6	100	80.466	ENSPNAG00000028816	cnot6b	100	80.466	Pygocentrus_nattereri
ENSCPOG00000035657	CNOT6	100	82.079	ENSPNAG00000029586	cnot6a	100	82.079	Pygocentrus_nattereri
ENSCPOG00000035657	CNOT6	100	91.382	ENSRNOG00000054891	Cnot6	100	91.382	Rattus_norvegicus
ENSCPOG00000035657	CNOT6	100	91.921	ENSRBIG00000004309	CNOT6	100	91.921	Rhinopithecus_bieti
ENSCPOG00000035657	CNOT6	100	91.921	ENSRROG00000035378	CNOT6	100	91.921	Rhinopithecus_roxellana
ENSCPOG00000035657	CNOT6	100	92.280	ENSSBOG00000030494	CNOT6	100	92.280	Saimiri_boliviensis_boliviensis
ENSCPOG00000035657	CNOT6	100	90.664	ENSSHAG00000017436	CNOT6	100	90.664	Sarcophilus_harrisii
ENSCPOG00000035657	CNOT6	100	81.541	ENSSFOG00015022383	cnot6a	96	81.541	Scleropages_formosus
ENSCPOG00000035657	CNOT6	100	83.333	ENSSFOG00015015133	CNOT6	100	83.333	Scleropages_formosus
ENSCPOG00000035657	CNOT6	100	80.322	ENSSMAG00000003084	cnot6b	100	80.322	Scophthalmus_maximus
ENSCPOG00000035657	CNOT6	100	81.753	ENSSDUG00000004151	cnot6b	100	81.753	Seriola_dumerili
ENSCPOG00000035657	CNOT6	100	81.038	ENSSLDG00000004448	cnot6b	100	81.932	Seriola_lalandi_dorsalis
ENSCPOG00000035657	CNOT6	63	69.832	ENSSARG00000012650	-	100	69.832	Sorex_araneus
ENSCPOG00000035657	CNOT6	100	89.767	ENSSPUG00000007893	CNOT6	100	89.767	Sphenodon_punctatus
ENSCPOG00000035657	CNOT6	100	81.932	ENSSPAG00000000149	cnot6b	100	81.932	Stegastes_partitus
ENSCPOG00000035657	CNOT6	100	92.280	ENSSSCG00000014009	CNOT6	100	92.280	Sus_scrofa
ENSCPOG00000035657	CNOT6	100	90.844	ENSTGUG00000001119	CNOT6	100	90.844	Taeniopygia_guttata
ENSCPOG00000035657	CNOT6	100	79.354	ENSTRUG00000002818	cnot6b	100	79.354	Takifugu_rubripes
ENSCPOG00000035657	CNOT6	100	79.713	ENSTNIG00000004443	cnot6b	99	79.713	Tetraodon_nigroviridis
ENSCPOG00000035657	CNOT6	87	61.807	ENSTBEG00000017094	-	100	61.807	Tupaia_belangeri
ENSCPOG00000035657	CNOT6	100	92.819	ENSTTRG00000009363	CNOT6	100	92.819	Tursiops_truncatus
ENSCPOG00000035657	CNOT6	81	87.419	ENSUAMG00000004579	CNOT6	95	87.419	Ursus_americanus
ENSCPOG00000035657	CNOT6	100	88.356	ENSUMAG00000024577	CNOT6	100	88.356	Ursus_maritimus
ENSCPOG00000035657	CNOT6	83	94.595	ENSVPAG00000003593	CNOT6	83	94.595	Vicugna_pacos
ENSCPOG00000035657	CNOT6	100	92.819	ENSVVUG00000026940	CNOT6	100	92.819	Vulpes_vulpes
ENSCPOG00000035657	CNOT6	100	77.778	ENSXCOG00000003360	cnot6b	100	77.778	Xiphophorus_couchianus
ENSCPOG00000035657	CNOT6	100	81.183	ENSXMAG00000008730	cnot6b	100	81.183	Xiphophorus_maculatus