EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000036143 (Gene tree)
Gene ID: 100734229
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 8272 bases
Position: chrDS562921.1:3769622-3777893
Accession: 100734229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000028484	SBDS	PF01172.18	6.3e-33	1	1
ENSCPOP00000028484	SBDS_C	PF09377.10	3.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000047491	SBDS-201	3795	XM_003465767	ENSCPOP00000028484	250 (aa)	XP_003465815	A0A286XSI9

Gene Model

Click here to download ENSCPOG00000036143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036143	SBDS	100	98.400	ENSG00000126524	SBDS	100	98.400	Homo_sapiens
ENSCPOG00000036143	SBDS	99	83.936	ENSAPOG00000014285	sbds	100	83.936	Acanthochromis_polyacanthus
ENSCPOG00000036143	SBDS	100	98.000	ENSAMEG00000018167	SBDS	100	98.000	Ailuropoda_melanoleuca
ENSCPOG00000036143	SBDS	99	83.730	ENSACIG00000007308	sbds	100	83.730	Amphilophus_citrinellus
ENSCPOG00000036143	SBDS	99	83.936	ENSAOCG00000016770	sbds	100	83.936	Amphiprion_ocellaris
ENSCPOG00000036143	SBDS	99	84.337	ENSAPEG00000015897	sbds	100	84.337	Amphiprion_percula
ENSCPOG00000036143	SBDS	99	84.337	ENSATEG00000006901	sbds	100	84.337	Anabas_testudineus
ENSCPOG00000036143	SBDS	92	91.342	ENSANAG00000024342	-	97	91.342	Aotus_nancymaae
ENSCPOG00000036143	SBDS	83	97.585	ENSANAG00000037501	-	100	97.585	Aotus_nancymaae
ENSCPOG00000036143	SBDS	99	85.141	ENSACLG00000018750	sbds	100	85.141	Astatotilapia_calliptera
ENSCPOG00000036143	SBDS	100	85.200	ENSAMXG00000005361	sbds	100	85.200	Astyanax_mexicanus
ENSCPOG00000036143	SBDS	100	98.800	ENSBTAG00000004051	SBDS	100	98.800	Bos_taurus
ENSCPOG00000036143	SBDS	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSCPOG00000036143	SBDS	100	98.000	ENSCJAG00000041007	SBDS	100	98.000	Callithrix_jacchus
ENSCPOG00000036143	SBDS	100	95.238	ENSCAFG00000010797	SBDS	100	95.238	Canis_familiaris
ENSCPOG00000036143	SBDS	100	97.600	ENSCAFG00020005357	SBDS	100	97.600	Canis_lupus_dingo
ENSCPOG00000036143	SBDS	100	98.800	ENSCHIG00000026854	SBDS	100	98.800	Capra_hircus
ENSCPOG00000036143	SBDS	100	98.400	ENSTSYG00000033822	SBDS	100	98.400	Carlito_syrichta
ENSCPOG00000036143	SBDS	66	100.000	ENSCAPG00000006634	SBDS	100	100.000	Cavia_aperea
ENSCPOG00000036143	SBDS	100	98.000	ENSCCAG00000020671	SBDS	100	98.000	Cebus_capucinus
ENSCPOG00000036143	SBDS	100	98.400	ENSCATG00000039026	SBDS	100	98.400	Cercocebus_atys
ENSCPOG00000036143	SBDS	100	99.600	ENSCLAG00000005721	-	100	99.600	Chinchilla_lanigera
ENSCPOG00000036143	SBDS	99	72.581	ENSCLAG00000002113	-	99	72.581	Chinchilla_lanigera
ENSCPOG00000036143	SBDS	100	98.400	ENSCSAG00000018275	SBDS	100	98.400	Chlorocebus_sabaeus
ENSCPOG00000036143	SBDS	100	94.000	ENSCHOG00000003795	SBDS	100	94.000	Choloepus_hoffmanni
ENSCPOG00000036143	SBDS	100	90.000	ENSCPBG00000014893	SBDS	100	90.000	Chrysemys_picta_bellii
ENSCPOG00000036143	SBDS	99	67.600	ENSCSAVG00000011811	-	100	67.600	Ciona_savignyi
ENSCPOG00000036143	SBDS	100	98.000	ENSCANG00000032368	SBDS	100	98.000	Colobus_angolensis_palliatus
ENSCPOG00000036143	SBDS	66	96.341	ENSCGRG00001019886	Sbds	100	96.341	Cricetulus_griseus_chok1gshd
ENSCPOG00000036143	SBDS	83	97.101	ENSCGRG00000009211	Sbds	100	97.101	Cricetulus_griseus_crigri
ENSCPOG00000036143	SBDS	99	82.329	ENSCSEG00000005798	sbds	100	82.329	Cynoglossus_semilaevis
ENSCPOG00000036143	SBDS	99	82.731	ENSCVAG00000001053	sbds	100	82.731	Cyprinodon_variegatus
ENSCPOG00000036143	SBDS	100	84.800	ENSDARG00000027803	sbds	100	84.800	Danio_rerio
ENSCPOG00000036143	SBDS	100	98.000	ENSDNOG00000041174	SBDS	100	98.000	Dasypus_novemcinctus
ENSCPOG00000036143	SBDS	100	96.800	ENSDORG00000026218	Sbds	100	96.800	Dipodomys_ordii
ENSCPOG00000036143	SBDS	90	58.772	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSCPOG00000036143	SBDS	93	58.798	ENSEBUG00000015780	sbds	100	58.798	Eptatretus_burgeri
ENSCPOG00000036143	SBDS	100	98.800	ENSEASG00005008821	SBDS	100	98.800	Equus_asinus_asinus
ENSCPOG00000036143	SBDS	100	98.800	ENSECAG00000008202	SBDS	100	98.800	Equus_caballus
ENSCPOG00000036143	SBDS	83	75.481	ENSEEUG00000004768	SBDS	100	75.481	Erinaceus_europaeus
ENSCPOG00000036143	SBDS	100	83.200	ENSELUG00000008382	sbds	100	83.200	Esox_lucius
ENSCPOG00000036143	SBDS	100	98.400	ENSFCAG00000022142	SBDS	100	98.400	Felis_catus
ENSCPOG00000036143	SBDS	100	90.400	ENSFALG00000013808	SBDS	100	90.400	Ficedula_albicollis
ENSCPOG00000036143	SBDS	100	100.000	ENSFDAG00000018947	-	100	100.000	Fukomys_damarensis
ENSCPOG00000036143	SBDS	99	79.518	ENSFHEG00000000708	sbds	100	79.518	Fundulus_heteroclitus
ENSCPOG00000036143	SBDS	100	84.000	ENSGMOG00000018356	sbds	99	84.000	Gadus_morhua
ENSCPOG00000036143	SBDS	100	89.600	ENSGALG00000027989	SBDS	100	89.600	Gallus_gallus
ENSCPOG00000036143	SBDS	92	79.565	ENSGAFG00000014204	sbds	100	79.565	Gambusia_affinis
ENSCPOG00000036143	SBDS	99	83.133	ENSGACG00000012697	sbds	100	83.133	Gasterosteus_aculeatus
ENSCPOG00000036143	SBDS	86	90.187	ENSGAGG00000022402	SBDS	100	90.187	Gopherus_agassizii
ENSCPOG00000036143	SBDS	96	78.008	ENSGGOG00000040023	-	92	78.008	Gorilla_gorilla
ENSCPOG00000036143	SBDS	99	85.141	ENSHBUG00000002660	sbds	100	85.141	Haplochromis_burtoni
ENSCPOG00000036143	SBDS	100	98.400	ENSHGLG00000009671	SBDS	100	98.400	Heterocephalus_glaber_female
ENSCPOG00000036143	SBDS	100	98.400	ENSHGLG00100011332	SBDS	100	98.400	Heterocephalus_glaber_male
ENSCPOG00000036143	SBDS	99	80.723	ENSHCOG00000018606	sbds	100	80.723	Hippocampus_comes
ENSCPOG00000036143	SBDS	100	86.000	ENSIPUG00000006536	sbds	100	86.000	Ictalurus_punctatus
ENSCPOG00000036143	SBDS	100	69.960	ENSJJAG00000003934	-	100	69.960	Jaculus_jaculus
ENSCPOG00000036143	SBDS	100	94.400	ENSJJAG00000012033	-	100	94.400	Jaculus_jaculus
ENSCPOG00000036143	SBDS	99	84.337	ENSKMAG00000018542	sbds	100	84.337	Kryptolebias_marmoratus
ENSCPOG00000036143	SBDS	99	81.526	ENSLBEG00000016687	sbds	100	81.526	Labrus_bergylta
ENSCPOG00000036143	SBDS	100	70.472	ENSLACG00000018916	SBDS	100	70.472	Latimeria_chalumnae
ENSCPOG00000036143	SBDS	100	88.400	ENSLOCG00000004073	sbds	100	88.400	Lepisosteus_oculatus
ENSCPOG00000036143	SBDS	100	96.800	ENSLAFG00000008763	SBDS	100	96.800	Loxodonta_africana
ENSCPOG00000036143	SBDS	100	98.400	ENSMFAG00000032620	SBDS	100	98.400	Macaca_fascicularis
ENSCPOG00000036143	SBDS	100	98.400	ENSMMUG00000045653	SBDS	100	98.400	Macaca_mulatta
ENSCPOG00000036143	SBDS	100	98.400	ENSMNEG00000031523	SBDS	100	98.400	Macaca_nemestrina
ENSCPOG00000036143	SBDS	100	74.803	ENSMLEG00000036826	SBDS	100	74.803	Mandrillus_leucophaeus
ENSCPOG00000036143	SBDS	99	83.936	ENSMAMG00000016062	sbds	100	83.936	Mastacembelus_armatus
ENSCPOG00000036143	SBDS	99	85.141	ENSMZEG00005024385	sbds	100	85.141	Maylandia_zebra
ENSCPOG00000036143	SBDS	100	89.600	ENSMGAG00000002119	SBDS	100	89.600	Meleagris_gallopavo
ENSCPOG00000036143	SBDS	99	77.912	ENSMAUG00000022214	-	100	77.912	Mesocricetus_auratus
ENSCPOG00000036143	SBDS	100	98.800	ENSMICG00000014366	SBDS	100	98.800	Microcebus_murinus
ENSCPOG00000036143	SBDS	100	98.400	ENSMOCG00000011739	Sbds	100	98.400	Microtus_ochrogaster
ENSCPOG00000036143	SBDS	99	74.000	ENSMMOG00000005061	sbds	100	73.600	Mola_mola
ENSCPOG00000036143	SBDS	100	96.800	ENSMODG00000006644	SBDS	100	96.800	Monodelphis_domestica
ENSCPOG00000036143	SBDS	99	83.936	ENSMALG00000010219	sbds	100	83.936	Monopterus_albus
ENSCPOG00000036143	SBDS	100	98.400	MGP_CAROLIEiJ_G0027800	Sbds	100	98.400	Mus_caroli
ENSCPOG00000036143	SBDS	100	98.000	ENSMUSG00000025337	Sbds	100	98.000	Mus_musculus
ENSCPOG00000036143	SBDS	100	98.000	MGP_PahariEiJ_G0024384	Sbds	100	98.000	Mus_pahari
ENSCPOG00000036143	SBDS	100	98.000	MGP_SPRETEiJ_G0028798	Sbds	100	98.000	Mus_spretus
ENSCPOG00000036143	SBDS	67	92.857	ENSMPUG00000016192	SBDS	97	92.857	Mustela_putorius_furo
ENSCPOG00000036143	SBDS	73	95.604	ENSMLUG00000013575	SBDS	100	95.604	Myotis_lucifugus
ENSCPOG00000036143	SBDS	100	98.400	ENSNGAG00000012093	Sbds	100	98.400	Nannospalax_galili
ENSCPOG00000036143	SBDS	99	85.141	ENSNBRG00000017027	sbds	100	85.141	Neolamprologus_brichardi
ENSCPOG00000036143	SBDS	100	98.400	ENSNLEG00000013288	SBDS	100	98.400	Nomascus_leucogenys
ENSCPOG00000036143	SBDS	100	96.800	ENSOPRG00000008721	SBDS	100	96.800	Ochotona_princeps
ENSCPOG00000036143	SBDS	100	89.600	ENSODEG00000019253	-	84	89.600	Octodon_degus
ENSCPOG00000036143	SBDS	99	77.912	ENSODEG00000001116	-	99	77.912	Octodon_degus
ENSCPOG00000036143	SBDS	99	73.896	ENSODEG00000000137	-	85	77.200	Octodon_degus
ENSCPOG00000036143	SBDS	99	84.337	ENSONIG00000005874	sbds	100	84.337	Oreochromis_niloticus
ENSCPOG00000036143	SBDS	83	91.304	ENSOANG00000007674	-	100	91.304	Ornithorhynchus_anatinus
ENSCPOG00000036143	SBDS	100	97.600	ENSOCUG00000003170	SBDS	100	97.600	Oryctolagus_cuniculus
ENSCPOG00000036143	SBDS	99	81.526	ENSORLG00000023489	sbds	100	81.526	Oryzias_latipes
ENSCPOG00000036143	SBDS	99	81.124	ENSORLG00020019282	sbds	100	81.124	Oryzias_latipes_hni
ENSCPOG00000036143	SBDS	99	81.124	ENSORLG00015008005	sbds	100	81.124	Oryzias_latipes_hsok
ENSCPOG00000036143	SBDS	99	81.928	ENSOMEG00000022747	sbds	100	81.928	Oryzias_melastigma
ENSCPOG00000036143	SBDS	100	82.000	ENSOGAG00000015036	-	100	82.000	Otolemur_garnettii
ENSCPOG00000036143	SBDS	100	98.400	ENSOGAG00000009011	-	100	98.400	Otolemur_garnettii
ENSCPOG00000036143	SBDS	100	98.800	ENSOARG00000010609	SBDS	100	98.800	Ovis_aries
ENSCPOG00000036143	SBDS	100	97.600	ENSPPAG00000043889	-	100	97.600	Pan_paniscus
ENSCPOG00000036143	SBDS	100	98.400	ENSPPRG00000002307	SBDS	100	98.400	Panthera_pardus
ENSCPOG00000036143	SBDS	100	98.400	ENSPTIG00000021308	SBDS	100	98.400	Panthera_tigris_altaica
ENSCPOG00000036143	SBDS	87	95.853	ENSPTRG00000048174	-	96	95.853	Pan_troglodytes
ENSCPOG00000036143	SBDS	100	83.600	ENSPTRG00000050835	-	100	83.600	Pan_troglodytes
ENSCPOG00000036143	SBDS	100	98.400	ENSPTRG00000019254	SBDS	100	98.400	Pan_troglodytes
ENSCPOG00000036143	SBDS	100	83.200	ENSPTRG00000047744	-	100	83.200	Pan_troglodytes
ENSCPOG00000036143	SBDS	100	98.000	ENSPANG00000004078	SBDS	100	98.000	Papio_anubis
ENSCPOG00000036143	SBDS	100	85.200	ENSPKIG00000006489	sbds	100	85.200	Paramormyrops_kingsleyae
ENSCPOG00000036143	SBDS	83	90.821	ENSPSIG00000014603	SBDS	99	90.821	Pelodiscus_sinensis
ENSCPOG00000036143	SBDS	99	82.731	ENSPMGG00000004246	sbds	100	82.731	Periophthalmus_magnuspinnatus
ENSCPOG00000036143	SBDS	100	98.000	ENSPEMG00000008728	Sbds	100	98.000	Peromyscus_maniculatus_bairdii
ENSCPOG00000036143	SBDS	100	95.200	ENSPCIG00000029718	SBDS	100	95.200	Phascolarctos_cinereus
ENSCPOG00000036143	SBDS	99	81.928	ENSPFOG00000015837	sbds	100	81.928	Poecilia_formosa
ENSCPOG00000036143	SBDS	99	81.928	ENSPLAG00000003641	sbds	100	81.928	Poecilia_latipinna
ENSCPOG00000036143	SBDS	99	81.928	ENSPMEG00000019483	sbds	100	81.928	Poecilia_mexicana
ENSCPOG00000036143	SBDS	99	81.526	ENSPREG00000018758	sbds	100	81.526	Poecilia_reticulata
ENSCPOG00000036143	SBDS	100	98.400	ENSPPYG00000017513	SBDS	100	98.400	Pongo_abelii
ENSCPOG00000036143	SBDS	100	98.800	ENSPCOG00000021098	SBDS	100	98.800	Propithecus_coquereli
ENSCPOG00000036143	SBDS	100	98.400	ENSPVAG00000009369	SBDS	100	98.400	Pteropus_vampyrus
ENSCPOG00000036143	SBDS	99	84.739	ENSPNYG00000022403	sbds	100	84.739	Pundamilia_nyererei
ENSCPOG00000036143	SBDS	100	86.000	ENSPNAG00000001120	sbds	100	86.000	Pygocentrus_nattereri
ENSCPOG00000036143	SBDS	100	98.000	ENSRNOG00000000888	Sbds	100	98.000	Rattus_norvegicus
ENSCPOG00000036143	SBDS	100	98.400	ENSRBIG00000035557	SBDS	100	98.400	Rhinopithecus_bieti
ENSCPOG00000036143	SBDS	100	98.400	ENSRROG00000040842	-	100	98.400	Rhinopithecus_roxellana
ENSCPOG00000036143	SBDS	100	80.400	ENSRROG00000041986	-	100	78.400	Rhinopithecus_roxellana
ENSCPOG00000036143	SBDS	96	44.082	YLR022C	-	96	43.320	Saccharomyces_cerevisiae
ENSCPOG00000036143	SBDS	93	97.414	ENSSBOG00000022460	SBDS	100	97.414	Saimiri_boliviensis_boliviensis
ENSCPOG00000036143	SBDS	100	83.200	ENSSHAG00000010263	SBDS	100	83.200	Sarcophilus_harrisii
ENSCPOG00000036143	SBDS	100	86.400	ENSSFOG00015001108	sbds	100	86.400	Scleropages_formosus
ENSCPOG00000036143	SBDS	99	84.739	ENSSMAG00000020506	sbds	100	84.739	Scophthalmus_maximus
ENSCPOG00000036143	SBDS	99	83.534	ENSSDUG00000001528	sbds	100	83.534	Seriola_dumerili
ENSCPOG00000036143	SBDS	99	83.936	ENSSLDG00000003659	sbds	100	83.936	Seriola_lalandi_dorsalis
ENSCPOG00000036143	SBDS	61	98.039	ENSSARG00000013132	-	100	98.039	Sorex_araneus
ENSCPOG00000036143	SBDS	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSCPOG00000036143	SBDS	100	87.200	ENSSPUG00000002699	SBDS	100	87.200	Sphenodon_punctatus
ENSCPOG00000036143	SBDS	99	83.936	ENSSPAG00000016419	sbds	100	76.400	Stegastes_partitus
ENSCPOG00000036143	SBDS	100	98.400	ENSSSCG00000007732	SBDS	100	98.400	Sus_scrofa
ENSCPOG00000036143	SBDS	66	90.909	ENSTGUG00000003426	SBDS	99	90.909	Taeniopygia_guttata
ENSCPOG00000036143	SBDS	99	83.936	ENSTRUG00000021443	sbds	100	83.936	Takifugu_rubripes
ENSCPOG00000036143	SBDS	99	82.731	ENSTNIG00000019000	sbds	100	82.731	Tetraodon_nigroviridis
ENSCPOG00000036143	SBDS	83	84.135	ENSTBEG00000001178	SBDS	100	84.135	Tupaia_belangeri
ENSCPOG00000036143	SBDS	100	78.800	ENSTTRG00000003921	SBDS	100	78.800	Tursiops_truncatus
ENSCPOG00000036143	SBDS	100	98.000	ENSUAMG00000001326	SBDS	100	98.000	Ursus_americanus
ENSCPOG00000036143	SBDS	100	98.000	ENSUMAG00000015353	SBDS	100	98.000	Ursus_maritimus
ENSCPOG00000036143	SBDS	100	97.600	ENSVVUG00000016478	SBDS	100	97.600	Vulpes_vulpes
ENSCPOG00000036143	SBDS	100	86.400	ENSXETG00000010093	sbds	100	86.400	Xenopus_tropicalis
ENSCPOG00000036143	SBDS	99	74.297	ENSXCOG00000010639	sbds	100	74.297	Xiphophorus_couchianus
ENSCPOG00000036143	SBDS	99	82.329	ENSXMAG00000006065	sbds	100	82.329	Xiphophorus_maculatus