EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000036300 (Gene tree)
Gene ID: 100728943
Gene Symbol: -
Alias: -
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 16551 bases
Position: chrDS562951.1:4706261-4722811
Accession: 100728943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000031583	zf-C2H2	PF00096.26	1.4e-11	1	2
ENSCPOP00000031583	zf-C2H2	PF00096.26	1.4e-11	2	2
ENSCPOP00000031583	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000030898	-	819	XM_003463656	ENSCPOP00000031583	272 (aa)	XP_003463704	A0A286Y1K9

Gene Model

Click here to download ENSCPOG00000036300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000036300	-	52	52.830	ENSCPOG00000034791	-	78	52.830

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036300	-	100	85.870	ENSG00000101115	SALL4	100	85.870	Homo_sapiens
ENSCPOG00000036300	-	98	92.593	ENSANAG00000023352	SALL4	100	87.319	Aotus_nancymaae
ENSCPOG00000036300	-	100	84.549	ENSCHIG00000026270	SALL4	50	84.549	Capra_hircus
ENSCPOG00000036300	-	100	86.266	ENSTSYG00000007359	SALL4	100	85.507	Carlito_syrichta
ENSCPOG00000036300	-	100	71.245	ENSCCAG00000029512	-	64	62.548	Cebus_capucinus
ENSCPOG00000036300	-	100	87.124	ENSCATG00000030757	SALL4	100	86.594	Cercocebus_atys
ENSCPOG00000036300	-	100	91.416	ENSCLAG00000010479	SALL4	100	91.304	Chinchilla_lanigera
ENSCPOG00000036300	-	100	80.172	ENSCGRG00001019569	Sall4	100	79.853	Cricetulus_griseus_chok1gshd
ENSCPOG00000036300	-	100	80.172	ENSCGRG00000000462	Sall4	100	79.121	Cricetulus_griseus_crigri
ENSCPOG00000036300	-	100	85.957	ENSDNOG00000040633	SALL4	53	85.957	Dasypus_novemcinctus
ENSCPOG00000036300	-	85	77.586	ENSDORG00000012841	Sall4	100	78.414	Dipodomys_ordii
ENSCPOG00000036300	-	100	85.408	ENSFCAG00000002822	SALL4	100	84.420	Felis_catus
ENSCPOG00000036300	-	100	90.987	ENSFDAG00000017812	SALL4	100	90.942	Fukomys_damarensis
ENSCPOG00000036300	-	100	86.232	ENSGGOG00000001832	SALL4	100	86.232	Gorilla_gorilla
ENSCPOG00000036300	-	100	86.752	ENSSTOG00000025002	SALL4	55	86.752	Ictidomys_tridecemlineatus
ENSCPOG00000036300	-	100	85.408	ENSJJAG00000020688	Sall4	100	84.727	Jaculus_jaculus
ENSCPOG00000036300	-	100	87.069	ENSMMUG00000003870	SALL4	100	86.594	Macaca_mulatta
ENSCPOG00000036300	-	100	86.594	ENSMNEG00000035995	SALL4	100	86.594	Macaca_nemestrina
ENSCPOG00000036300	-	100	79.741	ENSMAUG00000015814	Sall4	100	79.121	Mesocricetus_auratus
ENSCPOG00000036300	-	100	88.841	ENSMICG00000000027	SALL4	100	88.645	Microcebus_murinus
ENSCPOG00000036300	-	100	82.906	ENSMOCG00000018245	Sall4	100	82.182	Microtus_ochrogaster
ENSCPOG00000036300	-	100	79.498	MGP_CAROLIEiJ_G0024723	Sall4	100	79.211	Mus_caroli
ENSCPOG00000036300	-	100	79.916	ENSMUSG00000027547	Sall4	100	78.853	Mus_musculus
ENSCPOG00000036300	-	90	79.268	MGP_PahariEiJ_G0026164	Sall4	89	79.268	Mus_pahari
ENSCPOG00000036300	-	100	79.211	MGP_SPRETEiJ_G0025643	Sall4	100	79.211	Mus_spretus
ENSCPOG00000036300	-	100	86.752	ENSNGAG00000017833	Sall4	100	85.036	Nannospalax_galili
ENSCPOG00000036300	-	100	78.112	ENSOARG00000014570	SALL4	50	78.112	Ovis_aries
ENSCPOG00000036300	-	100	86.232	ENSPPAG00000038064	SALL4	100	86.232	Pan_paniscus
ENSCPOG00000036300	-	100	85.408	ENSPPRG00000008677	SALL4	100	84.420	Panthera_pardus
ENSCPOG00000036300	-	100	86.232	ENSPTRG00000013631	SALL4	100	86.232	Pan_troglodytes
ENSCPOG00000036300	-	100	86.594	ENSPANG00000021792	SALL4	100	86.594	Papio_anubis
ENSCPOG00000036300	-	100	83.761	ENSPEMG00000022706	Sall4	100	83.212	Peromyscus_maniculatus_bairdii
ENSCPOG00000036300	-	100	85.870	ENSPCOG00000016321	SALL4	100	85.870	Propithecus_coquereli
ENSCPOG00000036300	-	100	80.658	ENSRNOG00000050035	Sall4	100	80.565	Rattus_norvegicus
ENSCPOG00000036300	-	100	86.266	ENSSBOG00000030011	SALL4	100	85.145	Saimiri_boliviensis_boliviensis
ENSCPOG00000036300	-	100	57.931	ENSTGUG00000018244	-	100	59.655	Taeniopygia_guttata