EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000036544 (Gene tree)
Gene ID: 100735315
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 175666 bases
Position: chrDS562860.1:11208572-11384237
Accession: 100735315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030014	BRK	PF07533.16	2.4e-30	1	2
ENSCPOP00000030014	BRK	PF07533.16	2.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000033127	CHD9-203	2385	-	ENSCPOP00000025931	795 (aa)	-	A0A286XKJ3
ENSCPOT00000031959	CHD9-201	2308	-	ENSCPOP00000025234	642 (aa)	-	A0A286XIJ1
ENSCPOT00000032105	CHD9-202	8415	XM_013141371	ENSCPOP00000030014	2804 (aa)	XP_012996825	A0A286XXK2

Gene Model

Click here to download ENSCPOG00000036544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000036544	CHD9	74	58.231	ENSCPOG00000015641	CHD6	75	60.675
ENSCPOG00000036544	CHD9	90	53.102	ENSCPOG00000013385	CHD7	85	63.541
ENSCPOG00000036544	CHD9	67	64.076	ENSCPOG00000002538	CHD8	72	64.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036544	CHD9	100	91.761	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSCPOG00000036544	CHD9	84	68.153	ENSAPOG00000023034	chd9	66	70.781	Acanthochromis_polyacanthus
ENSCPOG00000036544	CHD9	100	91.185	ENSAMEG00000016232	CHD9	100	91.563	Ailuropoda_melanoleuca
ENSCPOG00000036544	CHD9	79	67.070	ENSACIG00000004097	chd9	73	58.403	Amphilophus_citrinellus
ENSCPOG00000036544	CHD9	83	67.961	ENSAOCG00000005487	chd9	67	70.960	Amphiprion_ocellaris
ENSCPOG00000036544	CHD9	92	67.915	ENSAPEG00000009859	chd9	67	70.900	Amphiprion_percula
ENSCPOG00000036544	CHD9	84	68.830	ENSATEG00000002748	chd9	99	59.409	Anabas_testudineus
ENSCPOG00000036544	CHD9	99	80.493	ENSAPLG00000002826	CHD9	74	81.840	Anas_platyrhynchos
ENSCPOG00000036544	CHD9	99	77.632	ENSACAG00000016150	CHD9	98	77.943	Anolis_carolinensis
ENSCPOG00000036544	CHD9	100	92.074	ENSANAG00000015630	CHD9	100	96.703	Aotus_nancymaae
ENSCPOG00000036544	CHD9	92	67.217	ENSACLG00000016899	chd9	73	59.653	Astatotilapia_calliptera
ENSCPOG00000036544	CHD9	96	59.920	ENSAMXG00000005652	chd9	68	70.479	Astyanax_mexicanus
ENSCPOG00000036544	CHD9	100	90.527	ENSBTAG00000002287	CHD9	100	90.837	Bos_taurus
ENSCPOG00000036544	CHD9	100	91.244	ENSCJAG00000001573	CHD9	100	97.070	Callithrix_jacchus
ENSCPOG00000036544	CHD9	100	91.354	ENSCAFG00000009699	CHD9	100	91.698	Canis_familiaris
ENSCPOG00000036544	CHD9	100	91.354	ENSCAFG00020002879	CHD9	100	98.168	Canis_lupus_dingo
ENSCPOG00000036544	CHD9	97	91.071	ENSCHIG00000021000	CHD9	99	91.080	Capra_hircus
ENSCPOG00000036544	CHD9	100	91.382	ENSTSYG00000007693	CHD9	100	97.802	Carlito_syrichta
ENSCPOG00000036544	CHD9	80	85.551	ENSCAPG00000011604	CHD9	96	85.551	Cavia_aperea
ENSCPOG00000036544	CHD9	100	91.247	ENSCCAG00000036178	CHD9	100	96.337	Cebus_capucinus
ENSCPOG00000036544	CHD9	100	90.358	ENSCATG00000036753	CHD9	100	97.070	Cercocebus_atys
ENSCPOG00000036544	CHD9	100	94.136	ENSCLAG00000007137	CHD9	100	94.136	Chinchilla_lanigera
ENSCPOG00000036544	CHD9	100	91.050	ENSCSAG00000005311	CHD9	100	91.566	Chlorocebus_sabaeus
ENSCPOG00000036544	CHD9	74	98.077	ENSCHOG00000003935	CHD9	75	98.077	Choloepus_hoffmanni
ENSCPOG00000036544	CHD9	99	81.783	ENSCPBG00000012459	CHD9	99	85.766	Chrysemys_picta_bellii
ENSCPOG00000036544	CHD9	100	91.012	ENSCANG00000030349	CHD9	100	97.070	Colobus_angolensis_palliatus
ENSCPOG00000036544	CHD9	99	89.055	ENSCGRG00001016150	Chd9	99	88.498	Cricetulus_griseus_chok1gshd
ENSCPOG00000036544	CHD9	99	89.055	ENSCGRG00000012850	Chd9	99	88.498	Cricetulus_griseus_crigri
ENSCPOG00000036544	CHD9	84	64.577	ENSCSEG00000009209	chd9	67	67.976	Cynoglossus_semilaevis
ENSCPOG00000036544	CHD9	84	67.299	ENSCVAG00000016195	chd9	73	59.056	Cyprinodon_variegatus
ENSCPOG00000036544	CHD9	54	69.878	ENSDARG00000074498	chd9	68	69.591	Danio_rerio
ENSCPOG00000036544	CHD9	80	89.711	ENSDNOG00000006045	CHD9	100	90.306	Dasypus_novemcinctus
ENSCPOG00000036544	CHD9	69	90.698	ENSDORG00000008523	-	98	90.799	Dipodomys_ordii
ENSCPOG00000036544	CHD9	94	97.368	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSCPOG00000036544	CHD9	99	90.878	ENSEASG00005014832	CHD9	100	92.671	Equus_asinus_asinus
ENSCPOG00000036544	CHD9	100	90.806	ENSECAG00000011505	CHD9	100	91.253	Equus_caballus
ENSCPOG00000036544	CHD9	82	90.497	ENSEEUG00000014515	CHD9	85	90.497	Erinaceus_europaeus
ENSCPOG00000036544	CHD9	80	65.706	ENSELUG00000006031	chd9	91	69.537	Esox_lucius
ENSCPOG00000036544	CHD9	100	90.868	ENSFCAG00000022534	CHD9	100	97.802	Felis_catus
ENSCPOG00000036544	CHD9	82	82.958	ENSFALG00000013276	CHD9	99	82.958	Ficedula_albicollis
ENSCPOG00000036544	CHD9	100	93.481	ENSFDAG00000021037	CHD9	100	93.481	Fukomys_damarensis
ENSCPOG00000036544	CHD9	84	66.526	ENSFHEG00000006068	chd9	68	70.233	Fundulus_heteroclitus
ENSCPOG00000036544	CHD9	66	71.845	ENSGMOG00000006040	chd9	83	71.845	Gadus_morhua
ENSCPOG00000036544	CHD9	95	81.550	ENSGALG00000039178	CHD9	98	81.550	Gallus_gallus
ENSCPOG00000036544	CHD9	83	66.582	ENSGAFG00000010014	chd9	67	70.161	Gambusia_affinis
ENSCPOG00000036544	CHD9	78	64.860	ENSGACG00000016694	chd9	93	70.739	Gasterosteus_aculeatus
ENSCPOG00000036544	CHD9	100	90.975	ENSGGOG00000014816	CHD9	100	97.436	Gorilla_gorilla
ENSCPOG00000036544	CHD9	84	67.776	ENSHBUG00000023322	chd9	96	69.231	Haplochromis_burtoni
ENSCPOG00000036544	CHD9	100	93.772	ENSHGLG00000014938	CHD9	100	93.772	Heterocephalus_glaber_female
ENSCPOG00000036544	CHD9	89	63.200	ENSHCOG00000000937	chd9	69	68.853	Hippocampus_comes
ENSCPOG00000036544	CHD9	81	65.947	ENSIPUG00000016448	chd9	97	72.993	Ictalurus_punctatus
ENSCPOG00000036544	CHD9	100	91.966	ENSSTOG00000022273	CHD9	100	91.828	Ictidomys_tridecemlineatus
ENSCPOG00000036544	CHD9	69	89.013	ENSJJAG00000015741	-	98	89.418	Jaculus_jaculus
ENSCPOG00000036544	CHD9	84	66.624	ENSKMAG00000016784	chd9	66	70.322	Kryptolebias_marmoratus
ENSCPOG00000036544	CHD9	79	66.290	ENSLBEG00000012077	chd9	92	69.372	Labrus_bergylta
ENSCPOG00000036544	CHD9	99	68.930	ENSLACG00000005557	CHD9	73	68.443	Latimeria_chalumnae
ENSCPOG00000036544	CHD9	87	68.996	ENSLOCG00000007225	chd9	99	69.303	Lepisosteus_oculatus
ENSCPOG00000036544	CHD9	100	90.393	ENSLAFG00000015374	CHD9	100	90.806	Loxodonta_africana
ENSCPOG00000036544	CHD9	100	90.944	ENSMFAG00000041354	CHD9	100	97.070	Macaca_fascicularis
ENSCPOG00000036544	CHD9	100	90.909	ENSMMUG00000016310	CHD9	100	97.070	Macaca_mulatta
ENSCPOG00000036544	CHD9	100	90.843	ENSMNEG00000031494	CHD9	100	91.705	Macaca_nemestrina
ENSCPOG00000036544	CHD9	100	90.978	ENSMLEG00000043219	CHD9	100	97.070	Mandrillus_leucophaeus
ENSCPOG00000036544	CHD9	84	66.566	ENSMAMG00000003909	chd9	73	59.303	Mastacembelus_armatus
ENSCPOG00000036544	CHD9	84	67.394	ENSMZEG00005006581	chd9	67	71.130	Maylandia_zebra
ENSCPOG00000036544	CHD9	95	77.730	ENSMGAG00000004642	CHD9	72	78.898	Meleagris_gallopavo
ENSCPOG00000036544	CHD9	100	91.041	ENSMICG00000016679	CHD9	100	97.436	Microcebus_murinus
ENSCPOG00000036544	CHD9	84	66.481	ENSMMOG00000016406	chd9	74	59.509	Mola_mola
ENSCPOG00000036544	CHD9	72	77.862	ENSMODG00000013142	-	99	86.067	Monodelphis_domestica
ENSCPOG00000036544	CHD9	83	67.065	ENSMALG00000013306	chd9	73	58.958	Monopterus_albus
ENSCPOG00000036544	CHD9	99	87.609	MGP_CAROLIEiJ_G0031364	Chd9	99	87.191	Mus_caroli
ENSCPOG00000036544	CHD9	99	87.391	ENSMUSG00000056608	Chd9	99	87.303	Mus_musculus
ENSCPOG00000036544	CHD9	99	85.809	MGP_PahariEiJ_G0022964	Chd9	99	85.426	Mus_pahari
ENSCPOG00000036544	CHD9	99	87.461	MGP_SPRETEiJ_G0032483	Chd9	99	87.008	Mus_spretus
ENSCPOG00000036544	CHD9	100	90.696	ENSMPUG00000003285	CHD9	100	91.041	Mustela_putorius_furo
ENSCPOG00000036544	CHD9	100	90.555	ENSMLUG00000004456	CHD9	100	90.555	Myotis_lucifugus
ENSCPOG00000036544	CHD9	93	67.757	ENSNBRG00000009423	chd9	67	71.002	Neolamprologus_brichardi
ENSCPOG00000036544	CHD9	90	90.958	ENSNLEG00000001026	CHD9	100	91.801	Nomascus_leucogenys
ENSCPOG00000036544	CHD9	74	98.496	ENSMEUG00000008222	-	82	98.496	Notamacropus_eugenii
ENSCPOG00000036544	CHD9	84	100.000	ENSOPRG00000011168	CHD9	83	100.000	Ochotona_princeps
ENSCPOG00000036544	CHD9	100	93.347	ENSODEG00000004466	CHD9	100	93.347	Octodon_degus
ENSCPOG00000036544	CHD9	79	68.419	ENSONIG00000002816	chd9	87	59.294	Oreochromis_niloticus
ENSCPOG00000036544	CHD9	100	83.488	ENSOANG00000013401	CHD9	100	83.419	Ornithorhynchus_anatinus
ENSCPOG00000036544	CHD9	83	91.970	ENSOCUG00000001016	CHD9	99	92.012	Oryctolagus_cuniculus
ENSCPOG00000036544	CHD9	84	66.234	ENSORLG00000013810	chd9	99	57.263	Oryzias_latipes
ENSCPOG00000036544	CHD9	84	66.040	ENSORLG00020020665	chd9	75	59.655	Oryzias_latipes_hni
ENSCPOG00000036544	CHD9	84	65.973	ENSORLG00015019126	chd9	95	65.656	Oryzias_latipes_hsok
ENSCPOG00000036544	CHD9	50	71.816	ENSOMEG00000015978	chd9	99	58.503	Oryzias_melastigma
ENSCPOG00000036544	CHD9	100	90.840	ENSOGAG00000002110	CHD9	100	91.388	Otolemur_garnettii
ENSCPOG00000036544	CHD9	100	90.296	ENSOARG00000017664	CHD9	100	90.674	Ovis_aries
ENSCPOG00000036544	CHD9	83	89.793	ENSPPAG00000039388	-	100	89.959	Pan_paniscus
ENSCPOG00000036544	CHD9	100	90.834	ENSPPRG00000004801	CHD9	100	97.436	Panthera_pardus
ENSCPOG00000036544	CHD9	100	89.800	ENSPTIG00000021854	CHD9	100	90.922	Panthera_tigris_altaica
ENSCPOG00000036544	CHD9	100	91.247	ENSPTRG00000008113	CHD9	100	97.436	Pan_troglodytes
ENSCPOG00000036544	CHD9	100	90.944	ENSPANG00000019307	CHD9	100	97.070	Papio_anubis
ENSCPOG00000036544	CHD9	97	59.923	ENSPKIG00000021876	chd9	68	72.060	Paramormyrops_kingsleyae
ENSCPOG00000036544	CHD9	98	56.440	ENSPKIG00000025401	-	71	59.746	Paramormyrops_kingsleyae
ENSCPOG00000036544	CHD9	63	80.432	ENSPSIG00000008099	CHD9	99	80.378	Pelodiscus_sinensis
ENSCPOG00000036544	CHD9	58	55.791	ENSPMAG00000006035	-	69	67.230	Petromyzon_marinus
ENSCPOG00000036544	CHD9	88	83.567	ENSPCIG00000017215	CHD9	99	82.469	Phascolarctos_cinereus
ENSCPOG00000036544	CHD9	83	66.484	ENSPFOG00000015839	chd9	70	66.927	Poecilia_formosa
ENSCPOG00000036544	CHD9	83	66.667	ENSPLAG00000011118	chd9	95	70.233	Poecilia_latipinna
ENSCPOG00000036544	CHD9	83	67.155	ENSPMEG00000015106	chd9	70	66.704	Poecilia_mexicana
ENSCPOG00000036544	CHD9	83	67.928	ENSPREG00000006473	chd9	98	64.317	Poecilia_reticulata
ENSCPOG00000036544	CHD9	100	91.110	ENSPPYG00000007348	CHD9	100	91.523	Pongo_abelii
ENSCPOG00000036544	CHD9	76	93.820	ENSPCAG00000007564	CHD9	86	93.820	Procavia_capensis
ENSCPOG00000036544	CHD9	100	90.145	ENSPCOG00000028433	CHD9	100	98.535	Propithecus_coquereli
ENSCPOG00000036544	CHD9	97	87.692	ENSPVAG00000015617	CHD9	98	88.889	Pteropus_vampyrus
ENSCPOG00000036544	CHD9	84	67.520	ENSPNYG00000010947	chd9	66	71.002	Pundamilia_nyererei
ENSCPOG00000036544	CHD9	85	63.399	ENSPNAG00000024141	chd9	68	70.280	Pygocentrus_nattereri
ENSCPOG00000036544	CHD9	90	84.421	ENSRNOG00000049302	Chd9	100	84.952	Rattus_norvegicus
ENSCPOG00000036544	CHD9	83	90.608	ENSRBIG00000035553	CHD9	100	97.070	Rhinopithecus_bieti
ENSCPOG00000036544	CHD9	82	90.522	ENSRROG00000033278	CHD9	100	97.070	Rhinopithecus_roxellana
ENSCPOG00000036544	CHD9	100	91.523	ENSSBOG00000030240	CHD9	100	96.337	Saimiri_boliviensis_boliviensis
ENSCPOG00000036544	CHD9	99	84.245	ENSSHAG00000002719	CHD9	100	84.285	Sarcophilus_harrisii
ENSCPOG00000036544	CHD9	88	62.851	ENSSFOG00015001327	chd9	67	71.760	Scleropages_formosus
ENSCPOG00000036544	CHD9	97	60.837	ENSSFOG00015020209	chd9	99	60.204	Scleropages_formosus
ENSCPOG00000036544	CHD9	83	65.912	ENSSMAG00000008953	chd9	91	69.469	Scophthalmus_maximus
ENSCPOG00000036544	CHD9	79	67.050	ENSSDUG00000006139	chd9	67	70.280	Seriola_dumerili
ENSCPOG00000036544	CHD9	79	67.397	ENSSLDG00000017818	chd9	66	70.262	Seriola_lalandi_dorsalis
ENSCPOG00000036544	CHD9	72	93.236	ENSSARG00000010632	CHD9	71	93.236	Sorex_araneus
ENSCPOG00000036544	CHD9	84	67.495	ENSSPAG00000021649	chd9	67	70.816	Stegastes_partitus
ENSCPOG00000036544	CHD9	99	89.611	ENSSSCG00000033591	CHD9	75	91.760	Sus_scrofa
ENSCPOG00000036544	CHD9	90	81.453	ENSTGUG00000007476	CHD9	100	81.491	Taeniopygia_guttata
ENSCPOG00000036544	CHD9	68	71.622	ENSTRUG00000009125	chd9	73	59.671	Takifugu_rubripes
ENSCPOG00000036544	CHD9	56	81.951	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSCPOG00000036544	CHD9	70	81.053	ENSTBEG00000016052	-	87	81.053	Tupaia_belangeri
ENSCPOG00000036544	CHD9	90	89.808	ENSTTRG00000012674	CHD9	90	90.651	Tursiops_truncatus
ENSCPOG00000036544	CHD9	66	91.216	ENSUAMG00000022706	CHD9	100	98.168	Ursus_americanus
ENSCPOG00000036544	CHD9	90	89.157	ENSUMAG00000004043	CHD9	99	90.529	Ursus_maritimus
ENSCPOG00000036544	CHD9	97	93.464	ENSVPAG00000001374	CHD9	97	93.464	Vicugna_pacos
ENSCPOG00000036544	CHD9	100	91.388	ENSVVUG00000019435	CHD9	100	91.733	Vulpes_vulpes
ENSCPOG00000036544	CHD9	99	70.407	ENSXETG00000000349	chd9	96	73.016	Xenopus_tropicalis
ENSCPOG00000036544	CHD9	78	67.933	ENSXCOG00000012997	chd9	67	70.370	Xiphophorus_couchianus
ENSCPOG00000036544	CHD9	78	66.990	ENSXMAG00000016192	chd9	67	71.168	Xiphophorus_maculatus