EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000036636 (Gene tree)
Gene ID: 100727539
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L39
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 156 bases
Position: chrDS562859.1:29597391-29597546
Accession: 100727539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000006801	Ribosomal_L39	PF00832.20	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000007612	-	156	XM_003477750	ENSCPOP00000006801	51 (aa)	XP_003477798	H0VAC5

Gene Model

Click here to download ENSCPOG00000036636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000036636	-	100	84.314	ENSCPOG00000036952	-	78	84.314
ENSCPOG00000036636	-	98	88.000	ENSCPOG00000031560	-	100	88.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036636	-	100	100.000	ENSAMEG00000019848	-	100	100.000	Ailuropoda_melanoleuca
ENSCPOG00000036636	-	100	100.000	ENSANAG00000031418	-	100	100.000	Aotus_nancymaae
ENSCPOG00000036636	-	100	98.039	ENSANAG00000016046	-	100	98.039	Aotus_nancymaae
ENSCPOG00000036636	-	100	92.157	ENSANAG00000016436	-	100	92.157	Aotus_nancymaae
ENSCPOG00000036636	-	100	96.078	ENSCAFG00020002578	-	100	96.078	Canis_lupus_dingo
ENSCPOG00000036636	-	100	98.039	ENSCAFG00020026664	-	100	98.039	Canis_lupus_dingo
ENSCPOG00000036636	-	100	96.078	ENSCAFG00020023883	-	100	96.078	Canis_lupus_dingo
ENSCPOG00000036636	-	100	98.039	ENSCAFG00020009904	-	100	98.039	Canis_lupus_dingo
ENSCPOG00000036636	-	100	92.157	ENSCAFG00020027515	-	100	92.157	Canis_lupus_dingo
ENSCPOG00000036636	-	100	96.078	ENSTSYG00000026785	-	100	96.078	Carlito_syrichta
ENSCPOG00000036636	-	90	91.304	ENSTSYG00000026787	-	82	91.304	Carlito_syrichta
ENSCPOG00000036636	-	100	100.000	ENSCAPG00000007210	-	100	100.000	Cavia_aperea
ENSCPOG00000036636	-	100	94.118	ENSCLAG00000017707	-	100	94.118	Chinchilla_lanigera
ENSCPOG00000036636	-	100	98.039	ENSCLAG00000017874	-	100	98.039	Chinchilla_lanigera
ENSCPOG00000036636	-	100	96.078	ENSCGRG00001012052	-	100	96.078	Cricetulus_griseus_chok1gshd
ENSCPOG00000036636	-	100	94.118	ENSCGRG00001003230	Rpl39l	100	94.118	Cricetulus_griseus_chok1gshd
ENSCPOG00000036636	-	100	86.275	ENSCGRG00001008057	-	100	86.275	Cricetulus_griseus_chok1gshd
ENSCPOG00000036636	-	100	96.078	ENSCGRG00000019654	-	100	96.078	Cricetulus_griseus_crigri
ENSCPOG00000036636	-	100	94.118	ENSCGRG00000018615	Rpl39l	100	94.118	Cricetulus_griseus_crigri
ENSCPOG00000036636	-	100	98.039	ENSDORG00000028485	-	100	98.039	Dipodomys_ordii
ENSCPOG00000036636	-	100	96.078	ENSDORG00000027732	-	100	96.078	Dipodomys_ordii
ENSCPOG00000036636	-	100	75.000	ENSFCAG00000038709	-	91	75.000	Felis_catus
ENSCPOG00000036636	-	100	82.353	ENSFCAG00000044333	RPL39L	100	82.353	Felis_catus
ENSCPOG00000036636	-	100	96.078	ENSFDAG00000021400	-	100	96.078	Fukomys_damarensis
ENSCPOG00000036636	-	92	93.617	ENSGGOG00000040312	-	65	93.617	Gorilla_gorilla
ENSCPOG00000036636	-	100	92.157	ENSGGOG00000036596	-	100	92.157	Gorilla_gorilla
ENSCPOG00000036636	-	100	96.078	ENSHGLG00000020604	-	100	96.078	Heterocephalus_glaber_female
ENSCPOG00000036636	-	100	96.078	ENSHGLG00100011216	-	100	96.078	Heterocephalus_glaber_male
ENSCPOG00000036636	-	100	98.039	ENSSTOG00000028051	-	100	98.039	Ictidomys_tridecemlineatus
ENSCPOG00000036636	-	100	100.000	ENSSTOG00000030492	-	100	100.000	Ictidomys_tridecemlineatus
ENSCPOG00000036636	-	100	92.157	ENSJJAG00000010041	-	100	92.157	Jaculus_jaculus
ENSCPOG00000036636	-	100	96.078	ENSLAFG00000028648	-	100	96.078	Loxodonta_africana
ENSCPOG00000036636	-	100	98.039	ENSMFAG00000020492	-	100	98.039	Macaca_fascicularis
ENSCPOG00000036636	-	100	94.118	ENSMMUG00000038479	-	100	94.118	Macaca_mulatta
ENSCPOG00000036636	-	100	100.000	ENSMMUG00000044527	-	100	100.000	Macaca_mulatta
ENSCPOG00000036636	-	100	98.039	ENSMMUG00000045452	-	100	98.039	Macaca_mulatta
ENSCPOG00000036636	-	100	92.157	ENSMNEG00000001683	-	68	92.157	Macaca_nemestrina
ENSCPOG00000036636	-	100	98.039	ENSMNEG00000000126	-	100	98.039	Macaca_nemestrina
ENSCPOG00000036636	-	100	94.118	ENSMLEG00000009433	-	100	94.118	Mandrillus_leucophaeus
ENSCPOG00000036636	-	98	98.000	ENSMLEG00000000739	-	100	98.000	Mandrillus_leucophaeus
ENSCPOG00000036636	-	100	100.000	ENSMLEG00000003517	-	100	100.000	Mandrillus_leucophaeus
ENSCPOG00000036636	-	100	98.039	ENSMLEG00000018088	-	100	98.039	Mandrillus_leucophaeus
ENSCPOG00000036636	-	100	94.118	ENSMAUG00000015776	Rpl39l	100	94.118	Mesocricetus_auratus
ENSCPOG00000036636	-	100	94.118	ENSMAUG00000002516	-	100	94.118	Mesocricetus_auratus
ENSCPOG00000036636	-	100	100.000	ENSMOCG00000002138	-	100	100.000	Microtus_ochrogaster
ENSCPOG00000036636	-	100	92.157	ENSMOCG00000001545	Rpl39l	100	92.157	Microtus_ochrogaster
ENSCPOG00000036636	-	100	96.078	MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	Mus_caroli
ENSCPOG00000036636	-	100	96.078	ENSMUSG00000039209	Rpl39l	100	96.078	Mus_musculus
ENSCPOG00000036636	-	100	96.078	MGP_SPRETEiJ_G0021332	Rpl39l	100	96.078	Mus_spretus
ENSCPOG00000036636	-	100	92.157	ENSMLUG00000015029	-	100	92.157	Myotis_lucifugus
ENSCPOG00000036636	-	100	92.157	ENSMLUG00000025012	-	100	92.157	Myotis_lucifugus
ENSCPOG00000036636	-	100	94.118	ENSNGAG00000012570	Rpl39l	100	94.118	Nannospalax_galili
ENSCPOG00000036636	-	90	91.304	ENSNGAG00000022494	-	96	91.304	Nannospalax_galili
ENSCPOG00000036636	-	100	90.196	ENSNGAG00000008665	-	100	90.196	Nannospalax_galili
ENSCPOG00000036636	-	100	98.039	ENSODEG00000020114	-	100	98.039	Octodon_degus
ENSCPOG00000036636	-	100	94.118	ENSOGAG00000024799	-	100	94.118	Otolemur_garnettii
ENSCPOG00000036636	-	100	90.196	ENSPPRG00000020779	-	100	90.196	Panthera_pardus
ENSCPOG00000036636	-	100	92.157	ENSPTIG00000006209	-	100	92.157	Panthera_tigris_altaica
ENSCPOG00000036636	-	98	98.000	ENSPANG00000030226	-	100	98.000	Papio_anubis
ENSCPOG00000036636	-	100	96.078	ENSRNOG00000032300	Rpl39l	100	96.078	Rattus_norvegicus
ENSCPOG00000036636	-	100	98.039	ENSRBIG00000010842	-	100	98.039	Rhinopithecus_bieti
ENSCPOG00000036636	-	100	98.039	ENSRROG00000023025	-	100	98.039	Rhinopithecus_roxellana
ENSCPOG00000036636	-	100	98.039	ENSRROG00000037724	-	100	98.039	Rhinopithecus_roxellana
ENSCPOG00000036636	-	100	94.118	ENSSSCG00000038385	-	69	94.118	Sus_scrofa
ENSCPOG00000036636	-	100	88.235	ENSSSCG00000033224	-	100	88.235	Sus_scrofa
ENSCPOG00000036636	-	100	100.000	ENSUAMG00000020990	-	100	100.000	Ursus_americanus
ENSCPOG00000036636	-	90	93.478	ENSUAMG00000000067	-	98	93.478	Ursus_americanus
ENSCPOG00000036636	-	100	100.000	ENSUMAG00000015280	-	100	100.000	Ursus_maritimus
ENSCPOG00000036636	-	100	90.196	ENSVVUG00000014095	-	100	90.196	Vulpes_vulpes
ENSCPOG00000036636	-	100	100.000	ENSVVUG00000030147	-	100	100.000	Vulpes_vulpes
ENSCPOG00000036636	-	98	96.000	ENSVVUG00000022951	-	100	96.000	Vulpes_vulpes