EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000036684 (Gene tree)
Gene ID: 100719086
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 90435 bases
Position: chrDS562859.1:41147852-41238286
Accession: 100719086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000025741	Ago_hook	PF10427.9	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000036642	TNRC6A-201	5694	XM_003478206	ENSCPOP00000025741	1897 (aa)	XP_003478254	A0A286XJZ7

Gene Model

Click here to download ENSCPOG00000036684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000036684	TNRC6A	97	37.319	ENSCPOG00000005705	TNRC6B	99	37.875
ENSCPOG00000036684	TNRC6A	97	40.920	ENSCPOG00000000467	TNRC6C	99	41.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036684	TNRC6A	100	96.128	ENSG00000090905	TNRC6A	99	96.128	Homo_sapiens
ENSCPOG00000036684	TNRC6A	98	92.734	ENSAMEG00000009333	TNRC6A	99	92.678	Ailuropoda_melanoleuca
ENSCPOG00000036684	TNRC6A	97	79.696	ENSAPLG00000009978	TNRC6A	100	79.328	Anas_platyrhynchos
ENSCPOG00000036684	TNRC6A	99	53.084	ENSACAG00000011857	TNRC6A	99	54.821	Anolis_carolinensis
ENSCPOG00000036684	TNRC6A	100	96.222	ENSANAG00000025252	TNRC6A	99	96.222	Aotus_nancymaae
ENSCPOG00000036684	TNRC6A	91	57.143	ENSAMXG00000019919	tnrc6a	100	57.002	Astyanax_mexicanus
ENSCPOG00000036684	TNRC6A	100	94.585	ENSBTAG00000017999	TNRC6A	99	94.322	Bos_taurus
ENSCPOG00000036684	TNRC6A	100	94.479	ENSCJAG00000020677	TNRC6A	99	94.479	Callithrix_jacchus
ENSCPOG00000036684	TNRC6A	98	95.274	ENSCAFG00000017531	TNRC6A	99	95.274	Canis_familiaris
ENSCPOG00000036684	TNRC6A	98	93.237	ENSCAFG00020021160	TNRC6A	99	94.153	Canis_lupus_dingo
ENSCPOG00000036684	TNRC6A	100	94.532	ENSCHIG00000019448	TNRC6A	99	100.000	Capra_hircus
ENSCPOG00000036684	TNRC6A	100	95.805	ENSTSYG00000012711	TNRC6A	99	95.805	Carlito_syrichta
ENSCPOG00000036684	TNRC6A	100	96.122	ENSCCAG00000033664	TNRC6A	99	96.122	Cebus_capucinus
ENSCPOG00000036684	TNRC6A	99	95.796	ENSCATG00000019284	TNRC6A	99	95.796	Cercocebus_atys
ENSCPOG00000036684	TNRC6A	100	92.396	ENSCLAG00000010217	TNRC6A	99	92.659	Chinchilla_lanigera
ENSCPOG00000036684	TNRC6A	100	93.463	ENSCSAG00000006561	TNRC6A	99	93.463	Chlorocebus_sabaeus
ENSCPOG00000036684	TNRC6A	95	88.359	ENSCHOG00000009374	TNRC6A	94	88.291	Choloepus_hoffmanni
ENSCPOG00000036684	TNRC6A	91	81.871	ENSCPBG00000001881	TNRC6A	99	81.871	Chrysemys_picta_bellii
ENSCPOG00000036684	TNRC6A	100	96.382	ENSCANG00000041549	TNRC6A	99	96.382	Colobus_angolensis_palliatus
ENSCPOG00000036684	TNRC6A	100	94.587	ENSCGRG00001015021	Tnrc6a	99	94.745	Cricetulus_griseus_chok1gshd
ENSCPOG00000036684	TNRC6A	100	93.491	ENSCGRG00000013351	Tnrc6a	99	93.386	Cricetulus_griseus_crigri
ENSCPOG00000036684	TNRC6A	91	56.927	ENSDARG00000079688	tnrc6a	99	56.902	Danio_rerio
ENSCPOG00000036684	TNRC6A	98	91.181	ENSDNOG00000013989	TNRC6A	99	91.076	Dasypus_novemcinctus
ENSCPOG00000036684	TNRC6A	98	84.664	ENSETEG00000014658	TNRC6A	99	84.716	Echinops_telfairi
ENSCPOG00000036684	TNRC6A	100	96.318	ENSEASG00005017693	TNRC6A	99	96.318	Equus_asinus_asinus
ENSCPOG00000036684	TNRC6A	99	96.162	ENSECAG00000025056	TNRC6A	100	96.162	Equus_caballus
ENSCPOG00000036684	TNRC6A	98	86.005	ENSEEUG00000004530	TNRC6A	99	86.005	Erinaceus_europaeus
ENSCPOG00000036684	TNRC6A	100	94.485	ENSFCAG00000025236	TNRC6A	99	94.485	Felis_catus
ENSCPOG00000036684	TNRC6A	100	76.900	ENSFALG00000003757	TNRC6A	99	77.952	Ficedula_albicollis
ENSCPOG00000036684	TNRC6A	91	82.248	ENSGALG00000006068	TNRC6A	99	82.651	Gallus_gallus
ENSCPOG00000036684	TNRC6A	91	81.081	ENSGAGG00000023209	TNRC6A	99	81.369	Gopherus_agassizii
ENSCPOG00000036684	TNRC6A	99	96.097	ENSGGOG00000005137	TNRC6A	99	96.097	Gorilla_gorilla
ENSCPOG00000036684	TNRC6A	99	95.419	ENSHGLG00000012474	-	100	95.419	Heterocephalus_glaber_female
ENSCPOG00000036684	TNRC6A	94	76.185	ENSHGLG00000007368	-	99	73.004	Heterocephalus_glaber_female
ENSCPOG00000036684	TNRC6A	99	95.351	ENSHGLG00100012496	-	100	95.351	Heterocephalus_glaber_male
ENSCPOG00000036684	TNRC6A	100	92.613	ENSSTOG00000023394	TNRC6A	99	92.562	Ictidomys_tridecemlineatus
ENSCPOG00000036684	TNRC6A	97	67.549	ENSLACG00000006277	TNRC6A	100	67.913	Latimeria_chalumnae
ENSCPOG00000036684	TNRC6A	100	82.781	ENSLOCG00000005517	tnrc6a	93	82.781	Lepisosteus_oculatus
ENSCPOG00000036684	TNRC6A	98	94.603	ENSLAFG00000004209	TNRC6A	99	94.654	Loxodonta_africana
ENSCPOG00000036684	TNRC6A	97	92.163	ENSMFAG00000003824	TNRC6A	99	92.163	Macaca_fascicularis
ENSCPOG00000036684	TNRC6A	100	96.172	ENSMMUG00000020428	TNRC6A	99	96.172	Macaca_mulatta
ENSCPOG00000036684	TNRC6A	100	95.722	ENSMNEG00000034854	TNRC6A	99	95.722	Macaca_nemestrina
ENSCPOG00000036684	TNRC6A	97	92.288	ENSMLEG00000042737	TNRC6A	97	92.183	Mandrillus_leucophaeus
ENSCPOG00000036684	TNRC6A	100	77.339	ENSMGAG00000006455	TNRC6A	99	77.390	Meleagris_gallopavo
ENSCPOG00000036684	TNRC6A	100	94.945	ENSMAUG00000012750	Tnrc6a	99	95.103	Mesocricetus_auratus
ENSCPOG00000036684	TNRC6A	100	96.651	ENSMICG00000030685	TNRC6A	99	96.651	Microcebus_murinus
ENSCPOG00000036684	TNRC6A	100	95.045	ENSMOCG00000000152	Tnrc6a	99	94.834	Microtus_ochrogaster
ENSCPOG00000036684	TNRC6A	100	78.871	ENSMODG00000016348	TNRC6A	99	79.770	Monodelphis_domestica
ENSCPOG00000036684	TNRC6A	99	93.358	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	93.305	Mus_caroli
ENSCPOG00000036684	TNRC6A	100	94.360	ENSMUSG00000052707	Tnrc6a	99	94.149	Mus_musculus
ENSCPOG00000036684	TNRC6A	99	94.211	MGP_PahariEiJ_G0013635	Tnrc6a	99	93.999	Mus_pahari
ENSCPOG00000036684	TNRC6A	100	91.624	MGP_SPRETEiJ_G0031539	Tnrc6a	100	91.208	Mus_spretus
ENSCPOG00000036684	TNRC6A	97	84.432	ENSMPUG00000012324	TNRC6A	100	84.000	Mustela_putorius_furo
ENSCPOG00000036684	TNRC6A	97	90.137	ENSMLUG00000002701	TNRC6A	100	90.137	Myotis_lucifugus
ENSCPOG00000036684	TNRC6A	100	95.792	ENSNGAG00000020702	Tnrc6a	100	95.844	Nannospalax_galili
ENSCPOG00000036684	TNRC6A	97	94.276	ENSNLEG00000011851	TNRC6A	98	94.219	Nomascus_leucogenys
ENSCPOG00000036684	TNRC6A	77	83.721	ENSMEUG00000015959	-	77	83.721	Notamacropus_eugenii
ENSCPOG00000036684	TNRC6A	96	99.254	ENSOPRG00000005819	TNRC6A	96	99.254	Ochotona_princeps
ENSCPOG00000036684	TNRC6A	99	91.233	ENSODEG00000012802	TNRC6A	99	91.073	Octodon_degus
ENSCPOG00000036684	TNRC6A	88	80.243	ENSOANG00000007672	TNRC6A	100	80.185	Ornithorhynchus_anatinus
ENSCPOG00000036684	TNRC6A	97	90.818	ENSOCUG00000004325	TNRC6A	100	90.660	Oryctolagus_cuniculus
ENSCPOG00000036684	TNRC6A	99	93.960	ENSOGAG00000006666	TNRC6A	100	93.960	Otolemur_garnettii
ENSCPOG00000036684	TNRC6A	99	91.302	ENSOARG00000017950	TNRC6A	98	95.108	Ovis_aries
ENSCPOG00000036684	TNRC6A	100	95.825	ENSPPAG00000028379	TNRC6A	100	95.825	Pan_paniscus
ENSCPOG00000036684	TNRC6A	100	94.485	ENSPPRG00000005861	TNRC6A	99	94.485	Panthera_pardus
ENSCPOG00000036684	TNRC6A	100	93.201	ENSPTIG00000006346	TNRC6A	99	93.253	Panthera_tigris_altaica
ENSCPOG00000036684	TNRC6A	99	91.304	ENSPTRG00000007898	TNRC6A	99	92.604	Pan_troglodytes
ENSCPOG00000036684	TNRC6A	100	93.260	ENSPANG00000018523	TNRC6A	99	93.260	Papio_anubis
ENSCPOG00000036684	TNRC6A	77	77.568	ENSPSIG00000003965	TNRC6A	100	77.568	Pelodiscus_sinensis
ENSCPOG00000036684	TNRC6A	100	94.523	ENSPEMG00000016318	Tnrc6a	100	94.365	Peromyscus_maniculatus_bairdii
ENSCPOG00000036684	TNRC6A	97	82.762	ENSPCIG00000012106	TNRC6A	100	82.976	Phascolarctos_cinereus
ENSCPOG00000036684	TNRC6A	100	92.762	ENSPPYG00000007202	TNRC6A	100	92.712	Pongo_abelii
ENSCPOG00000036684	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSCPOG00000036684	TNRC6A	100	94.241	ENSPCOG00000010134	TNRC6A	99	94.241	Propithecus_coquereli
ENSCPOG00000036684	TNRC6A	89	68.624	ENSPVAG00000012066	TNRC6A	99	69.200	Pteropus_vampyrus
ENSCPOG00000036684	TNRC6A	100	93.316	ENSRNOG00000024737	Tnrc6a	99	93.211	Rattus_norvegicus
ENSCPOG00000036684	TNRC6A	99	96.227	ENSRBIG00000014222	TNRC6A	100	96.227	Rhinopithecus_bieti
ENSCPOG00000036684	TNRC6A	100	93.648	ENSRROG00000032360	TNRC6A	99	93.648	Rhinopithecus_roxellana
ENSCPOG00000036684	TNRC6A	98	93.214	ENSSBOG00000036197	TNRC6A	100	94.207	Saimiri_boliviensis_boliviensis
ENSCPOG00000036684	TNRC6A	91	83.590	ENSSHAG00000008811	TNRC6A	99	84.046	Sarcophilus_harrisii
ENSCPOG00000036684	TNRC6A	91	58.131	ENSSFOG00015008920	tnrc6a	100	57.479	Scleropages_formosus
ENSCPOG00000036684	TNRC6A	71	75.443	ENSSARG00000002479	TNRC6A	89	76.269	Sorex_araneus
ENSCPOG00000036684	TNRC6A	90	77.938	ENSSPUG00000010525	TNRC6A	100	78.008	Sphenodon_punctatus
ENSCPOG00000036684	TNRC6A	100	94.984	ENSSSCG00000038870	TNRC6A	98	100.000	Sus_scrofa
ENSCPOG00000036684	TNRC6A	100	79.874	ENSTGUG00000006142	TNRC6A	99	80.660	Taeniopygia_guttata
ENSCPOG00000036684	TNRC6A	98	91.327	ENSTBEG00000014965	TNRC6A	99	91.270	Tupaia_belangeri
ENSCPOG00000036684	TNRC6A	93	92.341	ENSTTRG00000002008	TNRC6A	93	92.341	Tursiops_truncatus
ENSCPOG00000036684	TNRC6A	79	95.114	ENSUAMG00000006656	-	93	95.181	Ursus_americanus
ENSCPOG00000036684	TNRC6A	98	92.167	ENSUMAG00000008274	TNRC6A	100	96.747	Ursus_maritimus
ENSCPOG00000036684	TNRC6A	55	87.755	ENSVPAG00000010764	-	57	87.245	Vicugna_pacos
ENSCPOG00000036684	TNRC6A	99	95.246	ENSVVUG00000005380	TNRC6A	99	95.246	Vulpes_vulpes
ENSCPOG00000036684	TNRC6A	95	63.729	ENSXETG00000030437	TNRC6A	99	64.205	Xenopus_tropicalis