EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000036704 (Gene tree)
Gene ID: 100729486
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 27003 bases
Position: chrDS562861.1:648616-675618
Accession: 100729486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	1	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	2	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	3	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	4	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	5	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	6	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	7	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	8	9
ENSCPOP00000032111	zf-C2H2	PF00096.26	4.6e-51	9	9
ENSCPOP00000032111	zf-met	PF12874.7	1.7e-10	1	2
ENSCPOP00000032111	zf-met	PF12874.7	1.7e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000032718	-	5543	XM_003477141	ENSCPOP00000032111	654 (aa)	XP_003477189	A0A286Y2P9

Gene Model

Click here to download ENSCPOG00000036704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000036704	-	77	34.911	ENSCPOG00000027176	PRDM14	65	34.911
ENSCPOG00000036704	-	95	42.469	ENSCPOG00000040740	ZNF226	98	42.469
ENSCPOG00000036704	-	77	53.659	ENSCPOG00000033345	-	97	53.659
ENSCPOG00000036704	-	77	49.822	ENSCPOG00000005238	ZNF768	68	48.621
ENSCPOG00000036704	-	59	45.455	ENSCPOG00000000162	ZNF423	99	38.889
ENSCPOG00000036704	-	58	31.579	ENSCPOG00000034707	ZNF646	69	31.373
ENSCPOG00000036704	-	86	58.333	ENSCPOG00000031196	ZNF81	84	58.333
ENSCPOG00000036704	-	50	44.318	ENSCPOG00000033316	WT1	50	43.182
ENSCPOG00000036704	-	79	42.026	ENSCPOG00000035016	ZNF112	81	42.026
ENSCPOG00000036704	-	70	47.561	ENSCPOG00000040579	ZNF865	80	32.549
ENSCPOG00000036704	-	58	34.615	ENSCPOG00000039249	ZNF784	65	35.329
ENSCPOG00000036704	-	59	42.727	ENSCPOG00000002374	ZIC3	60	42.727
ENSCPOG00000036704	-	71	33.777	ENSCPOG00000000780	ZNF574	94	33.742
ENSCPOG00000036704	-	77	44.017	ENSCPOG00000034004	-	80	44.017
ENSCPOG00000036704	-	62	47.368	ENSCPOG00000012883	PRDM5	77	47.368
ENSCPOG00000036704	-	51	41.538	ENSCPOG00000030326	-	74	41.538
ENSCPOG00000036704	-	89	50.144	ENSCPOG00000035563	-	99	50.144
ENSCPOG00000036704	-	99	55.785	ENSCPOG00000035126	ZNF2	96	55.785
ENSCPOG00000036704	-	99	45.509	ENSCPOG00000003954	ZNF317	86	45.509
ENSCPOG00000036704	-	50	38.916	ENSCPOG00000010143	GTF3A	79	38.916
ENSCPOG00000036704	-	99	44.536	ENSCPOG00000034791	-	98	45.266
ENSCPOG00000036704	-	99	43.852	ENSCPOG00000007108	ZNF202	62	43.852
ENSCPOG00000036704	-	77	35.519	ENSCPOG00000030357	ZNF319	85	36.765
ENSCPOG00000036704	-	100	50.459	ENSCPOG00000032242	-	92	50.459
ENSCPOG00000036704	-	56	37.956	ENSCPOG00000033449	-	62	37.956
ENSCPOG00000036704	-	87	45.330	ENSCPOG00000039731	ZNF235	73	45.330
ENSCPOG00000036704	-	69	46.667	ENSCPOG00000008424	ZNF236	68	41.573
ENSCPOG00000036704	-	99	54.297	ENSCPOG00000000634	ZFP1	99	54.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036704	-	99	60.030	ENSCGRG00001002406	Zfp39	92	60.030	Cricetulus_griseus_chok1gshd
ENSCPOG00000036704	-	99	60.030	ENSCGRG00000002730	Zfp39	92	60.030	Cricetulus_griseus_crigri
ENSCPOG00000036704	-	99	62.424	ENSJJAG00000018925	Zfp39	92	62.424	Jaculus_jaculus
ENSCPOG00000036704	-	99	59.607	ENSMAUG00000001536	Zfp39	93	59.607	Mesocricetus_auratus
ENSCPOG00000036704	-	99	58.030	ENSMOCG00000017961	Zfp39	93	58.030	Microtus_ochrogaster
ENSCPOG00000036704	-	99	59.607	MGP_PahariEiJ_G0017548	Zfp39	92	59.607	Mus_pahari
ENSCPOG00000036704	-	95	62.201	ENSNGAG00000019853	Zfp39	93	62.201	Nannospalax_galili
ENSCPOG00000036704	-	70	98.667	ENSODEG00000000805	-	100	98.667	Octodon_degus
ENSCPOG00000036704	-	99	59.607	ENSPEMG00000009428	Zfp39	92	59.607	Peromyscus_maniculatus_bairdii
ENSCPOG00000036704	-	99	57.337	ENSRNOG00000014712	Zfp39	92	57.337	Rattus_norvegicus