EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000036973 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 897 bases
Position: chrDS562893.1:3976887-3977783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000026034	TUDOR	PF00567.24	4.4e-05	1	1
ENSCPOP00000026034	SMN	PF06003.12	8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035912	-	873	-	ENSCPOP00000026034	290 (aa)	-	A0A286XKR4

Gene Model

Click here to download ENSCPOG00000036973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000036973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000036973	-	99	97.297	ENSCPOG00000012328	-	100	97.297

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000036973	-	99	80.887	ENSG00000172062	SMN1	99	83.908	Homo_sapiens
ENSCPOG00000036973	-	99	80.887	ENSG00000205571	SMN2	99	83.908	Homo_sapiens
ENSCPOG00000036973	-	92	53.237	ENSAPOG00000011324	smn1	94	50.183	Acanthochromis_polyacanthus
ENSCPOG00000036973	-	96	82.979	ENSAMEG00000003316	-	96	82.594	Ailuropoda_melanoleuca
ENSCPOG00000036973	-	88	49.254	ENSACIG00000019772	-	97	49.615	Amphilophus_citrinellus
ENSCPOG00000036973	-	92	53.237	ENSAOCG00000024444	smn1	94	52.347	Amphiprion_ocellaris
ENSCPOG00000036973	-	92	51.389	ENSAPEG00000016504	smn1	94	52.347	Amphiprion_percula
ENSCPOG00000036973	-	89	53.903	ENSATEG00000002182	smn1	79	52.830	Anabas_testudineus
ENSCPOG00000036973	-	68	56.345	ENSAPLG00000010912	-	96	54.822	Anas_platyrhynchos
ENSCPOG00000036973	-	93	53.237	ENSACAG00000010017	-	95	57.348	Anolis_carolinensis
ENSCPOG00000036973	-	99	80.000	ENSANAG00000032133	-	99	80.339	Aotus_nancymaae
ENSCPOG00000036973	-	92	51.071	ENSACLG00000007308	smn1	88	51.481	Astatotilapia_calliptera
ENSCPOG00000036973	-	96	80.919	ENSBTAG00000005743	SMN2	99	78.819	Bos_taurus
ENSCPOG00000036973	-	99	81.633	ENSCJAG00000016290	-	99	81.973	Callithrix_jacchus
ENSCPOG00000036973	-	96	82.624	ENSCAFG00000007812	SMN	100	81.570	Canis_familiaris
ENSCPOG00000036973	-	96	82.562	ENSCAFG00020019229	-	93	81.507	Canis_lupus_dingo
ENSCPOG00000036973	-	96	80.702	ENSCHIG00000015559	-	99	77.365	Capra_hircus
ENSCPOG00000036973	-	99	80.412	ENSTSYG00000012058	-	99	81.100	Carlito_syrichta
ENSCPOG00000036973	-	76	89.041	ENSCAPG00000011021	-	96	88.584	Cavia_aperea
ENSCPOG00000036973	-	99	80.822	ENSCCAG00000018127	-	99	81.164	Cebus_capucinus
ENSCPOG00000036973	-	99	81.911	ENSCATG00000037002	-	99	82.418	Cercocebus_atys
ENSCPOG00000036973	-	100	87.248	ENSCLAG00000000284	-	100	88.255	Chinchilla_lanigera
ENSCPOG00000036973	-	99	82.253	ENSCSAG00000015688	-	99	82.594	Chlorocebus_sabaeus
ENSCPOG00000036973	-	86	68.651	ENSCHOG00000007346	-	67	79.762	Choloepus_hoffmanni
ENSCPOG00000036973	-	92	61.905	ENSCPBG00000010968	-	96	60.837	Chrysemys_picta_bellii
ENSCPOG00000036973	-	95	77.224	ENSCANG00000033324	-	95	77.224	Colobus_angolensis_palliatus
ENSCPOG00000036973	-	99	82.818	ENSCANG00000038242	-	100	82.734	Colobus_angolensis_palliatus
ENSCPOG00000036973	-	100	77.551	ENSCGRG00001017959	-	100	78.231	Cricetulus_griseus_chok1gshd
ENSCPOG00000036973	-	100	61.034	ENSCGRG00001016998	-	100	62.759	Cricetulus_griseus_chok1gshd
ENSCPOG00000036973	-	100	77.551	ENSCGRG00000007698	Smn1	100	78.231	Cricetulus_griseus_crigri
ENSCPOG00000036973	-	92	44.406	ENSCSEG00000015227	smn1	97	47.059	Cynoglossus_semilaevis
ENSCPOG00000036973	-	92	50.179	ENSCVAG00000007498	smn1	95	50.545	Cyprinodon_variegatus
ENSCPOG00000036973	-	93	51.429	ENSDARG00000018494	smn1	95	51.049	Danio_rerio
ENSCPOG00000036973	-	82	78.926	ENSDNOG00000007283	-	100	79.752	Dasypus_novemcinctus
ENSCPOG00000036973	-	77	68.018	ENSDNOG00000045949	-	79	66.486	Dasypus_novemcinctus
ENSCPOG00000036973	-	100	74.403	ENSDORG00000007082	Smn1	99	72.696	Dipodomys_ordii
ENSCPOG00000036973	-	72	66.351	ENSETEG00000001406	-	93	65.641	Echinops_telfairi
ENSCPOG00000036973	-	92	37.333	ENSEBUG00000011902	smn1	95	37.716	Eptatretus_burgeri
ENSCPOG00000036973	-	86	73.333	ENSEASG00005018000	-	89	73.725	Equus_asinus_asinus
ENSCPOG00000036973	-	96	79.859	ENSECAG00000015215	-	100	79.661	Equus_caballus
ENSCPOG00000036973	-	86	73.705	ENSEEUG00000015777	-	100	71.146	Erinaceus_europaeus
ENSCPOG00000036973	-	93	53.169	ENSELUG00000018067	smn1	95	50.545	Esox_lucius
ENSCPOG00000036973	-	100	80.272	ENSFCAG00000028292	SMN	100	80.952	Felis_catus
ENSCPOG00000036973	-	90	59.259	ENSFALG00000012320	-	94	59.259	Ficedula_albicollis
ENSCPOG00000036973	-	100	84.564	ENSFDAG00000017683	-	100	84.564	Fukomys_damarensis
ENSCPOG00000036973	-	61	52.198	ENSFHEG00000018508	smn1	96	50.896	Fundulus_heteroclitus
ENSCPOG00000036973	-	95	46.853	ENSGMOG00000017279	smn1	95	42.553	Gadus_morhua
ENSCPOG00000036973	-	92	58.303	ENSGALG00000002430	SMN	95	56.089	Gallus_gallus
ENSCPOG00000036973	-	92	51.429	ENSGAFG00000009501	smn1	94	50.730	Gambusia_affinis
ENSCPOG00000036973	-	92	52.788	ENSGACG00000010584	smn1	91	48.905	Gasterosteus_aculeatus
ENSCPOG00000036973	-	94	35.437	ENSGAGG00000013639	-	59	48.485	Gopherus_agassizii
ENSCPOG00000036973	-	96	59.298	ENSGAGG00000011374	-	96	58.741	Gopherus_agassizii
ENSCPOG00000036973	-	98	68.750	ENSGGOG00000003872	-	100	70.504	Gorilla_gorilla
ENSCPOG00000036973	-	66	80.000	ENSGGOG00000026704	-	91	80.000	Gorilla_gorilla
ENSCPOG00000036973	-	91	50.185	ENSHBUG00000013987	smn1	94	52.399	Haplochromis_burtoni
ENSCPOG00000036973	-	100	84.483	ENSHGLG00000001905	-	100	84.483	Heterocephalus_glaber_female
ENSCPOG00000036973	-	100	85.235	ENSHGLG00000001018	-	100	85.570	Heterocephalus_glaber_female
ENSCPOG00000036973	-	96	84.173	ENSHGLG00100018676	-	100	84.173	Heterocephalus_glaber_male
ENSCPOG00000036973	-	100	85.235	ENSHGLG00100011252	-	100	85.570	Heterocephalus_glaber_male
ENSCPOG00000036973	-	89	50.185	ENSHCOG00000017136	smn1	87	46.415	Hippocampus_comes
ENSCPOG00000036973	-	93	47.351	ENSIPUG00000012580	smn1	86	48.951	Ictalurus_punctatus
ENSCPOG00000036973	-	95	83.094	ENSSTOG00000012288	-	100	83.813	Ictidomys_tridecemlineatus
ENSCPOG00000036973	-	59	65.497	ENSJJAG00000014853	-	89	65.116	Jaculus_jaculus
ENSCPOG00000036973	-	92	52.669	ENSKMAG00000007239	smn1	96	49.811	Kryptolebias_marmoratus
ENSCPOG00000036973	-	92	53.237	ENSLBEG00000022550	smn1	94	51.579	Labrus_bergylta
ENSCPOG00000036973	-	94	35.254	ENSLACG00000009808	-	97	35.314	Latimeria_chalumnae
ENSCPOG00000036973	-	92	52.727	ENSLOCG00000011339	smn1	95	53.069	Lepisosteus_oculatus
ENSCPOG00000036973	-	100	79.461	ENSLAFG00000003425	-	97	79.461	Loxodonta_africana
ENSCPOG00000036973	-	99	77.474	ENSMFAG00000008812	-	99	77.816	Macaca_fascicularis
ENSCPOG00000036973	-	99	82.594	ENSMFAG00000031523	SMN1	99	83.516	Macaca_fascicularis
ENSCPOG00000036973	-	99	76.451	ENSMMUG00000030594	-	99	77.133	Macaca_mulatta
ENSCPOG00000036973	-	99	82.594	ENSMMUG00000020214	SMN1	99	83.516	Macaca_mulatta
ENSCPOG00000036973	-	76	69.369	ENSMNEG00000036423	-	86	65.766	Macaca_nemestrina
ENSCPOG00000036973	-	99	82.253	ENSMNEG00000035094	-	99	83.516	Macaca_nemestrina
ENSCPOG00000036973	-	99	82.594	ENSMLEG00000041902	-	99	82.935	Mandrillus_leucophaeus
ENSCPOG00000036973	-	91	50.000	ENSMAMG00000011034	smn1	94	50.174	Mastacembelus_armatus
ENSCPOG00000036973	-	91	52.330	ENSMZEG00005013634	smn1	94	53.047	Maylandia_zebra
ENSCPOG00000036973	-	68	57.653	ENSMGAG00000008889	-	94	55.612	Meleagris_gallopavo
ENSCPOG00000036973	-	100	76.190	ENSMAUG00000010262	Smn1	100	76.871	Mesocricetus_auratus
ENSCPOG00000036973	-	100	67.905	ENSMICG00000034708	-	100	75.824	Microcebus_murinus
ENSCPOG00000036973	-	100	76.190	ENSMOCG00000017833	Smn1	100	76.871	Microtus_ochrogaster
ENSCPOG00000036973	-	91	46.209	ENSMMOG00000005504	smn1	96	48.929	Mola_mola
ENSCPOG00000036973	-	97	65.035	ENSMODG00000001436	-	97	65.854	Monodelphis_domestica
ENSCPOG00000036973	-	92	50.179	ENSMALG00000008025	smn1	95	51.079	Monopterus_albus
ENSCPOG00000036973	-	100	76.949	MGP_CAROLIEiJ_G0018836	Smn1	100	77.627	Mus_caroli
ENSCPOG00000036973	-	100	75.593	ENSMUSG00000021645	Smn1	100	76.949	Mus_musculus
ENSCPOG00000036973	-	100	74.744	MGP_PahariEiJ_G0015911	Smn1	100	74.744	Mus_pahari
ENSCPOG00000036973	-	100	75.254	MGP_SPRETEiJ_G0019718	Smn1	100	76.610	Mus_spretus
ENSCPOG00000036973	-	95	82.437	ENSMPUG00000014470	-	98	82.079	Mustela_putorius_furo
ENSCPOG00000036973	-	96	80.345	ENSMLUG00000010603	-	96	79.402	Myotis_lucifugus
ENSCPOG00000036973	-	100	77.891	ENSNGAG00000019833	Smn1	100	77.891	Nannospalax_galili
ENSCPOG00000036973	-	91	50.000	ENSNBRG00000023000	smn1	94	53.137	Neolamprologus_brichardi
ENSCPOG00000036973	-	99	80.887	ENSNLEG00000004454	-	99	83.908	Nomascus_leucogenys
ENSCPOG00000036973	-	77	63.877	ENSMEUG00000011393	-	99	63.158	Notamacropus_eugenii
ENSCPOG00000036973	-	86	79.051	ENSOPRG00000002015	-	100	79.447	Ochotona_princeps
ENSCPOG00000036973	-	94	90.876	ENSODEG00000015976	-	97	91.606	Octodon_degus
ENSCPOG00000036973	-	91	49.632	ENSONIG00000011799	smn1	94	52.768	Oreochromis_niloticus
ENSCPOG00000036973	-	93	64.855	ENSOANG00000001626	-	96	64.982	Ornithorhynchus_anatinus
ENSCPOG00000036973	-	100	78.498	ENSOCUG00000017097	-	99	79.181	Oryctolagus_cuniculus
ENSCPOG00000036973	-	99	71.380	ENSOCUG00000025183	-	100	72.483	Oryctolagus_cuniculus
ENSCPOG00000036973	-	99	74.074	ENSOCUG00000026649	-	99	77.441	Oryctolagus_cuniculus
ENSCPOG00000036973	-	53	59.748	ENSORLG00000010552	smn1	53	60.784	Oryzias_latipes
ENSCPOG00000036973	-	92	51.095	ENSORLG00020007936	smn1	94	49.630	Oryzias_latipes_hni
ENSCPOG00000036973	-	53	58.491	ENSORLG00015022425	smn1	94	50.730	Oryzias_latipes_hsok
ENSCPOG00000036973	-	92	50.355	ENSOMEG00000007824	smn1	94	49.648	Oryzias_melastigma
ENSCPOG00000036973	-	91	74.359	ENSOGAG00000031414	-	100	72.414	Otolemur_garnettii
ENSCPOG00000036973	-	94	78.986	ENSOARG00000005425	-	100	77.174	Ovis_aries
ENSCPOG00000036973	-	99	80.546	ENSPPAG00000036640	-	99	83.908	Pan_paniscus
ENSCPOG00000036973	-	100	80.612	ENSPPRG00000005575	-	100	81.293	Panthera_pardus
ENSCPOG00000036973	-	100	80.339	ENSPTIG00000007745	-	100	81.017	Panthera_tigris_altaica
ENSCPOG00000036973	-	99	80.068	ENSPTRG00000016955	-	99	83.908	Pan_troglodytes
ENSCPOG00000036973	-	98	77.241	ENSPANG00000000253	-	98	77.931	Papio_anubis
ENSCPOG00000036973	-	99	82.594	ENSPANG00000013601	-	99	83.516	Papio_anubis
ENSCPOG00000036973	-	93	50.526	ENSPKIG00000011096	smn1	97	49.296	Paramormyrops_kingsleyae
ENSCPOG00000036973	-	91	57.971	ENSPSIG00000014787	-	87	57.040	Pelodiscus_sinensis
ENSCPOG00000036973	-	92	47.331	ENSPMGG00000012285	smn1	94	49.810	Periophthalmus_magnuspinnatus
ENSCPOG00000036973	-	89	43.346	ENSPMAG00000005004	smn1	96	40.283	Petromyzon_marinus
ENSCPOG00000036973	-	97	66.434	ENSPCIG00000025764	-	99	67.247	Phascolarctos_cinereus
ENSCPOG00000036973	-	92	51.825	ENSPFOG00000007786	smn1	94	51.460	Poecilia_formosa
ENSCPOG00000036973	-	92	52.190	ENSPLAG00000012071	smn1	94	51.825	Poecilia_latipinna
ENSCPOG00000036973	-	92	51.825	ENSPMEG00000017085	smn1	94	51.460	Poecilia_mexicana
ENSCPOG00000036973	-	92	52.500	ENSPREG00000005824	smn1	94	52.190	Poecilia_reticulata
ENSCPOG00000036973	-	85	49.600	ENSPPYG00000019189	-	98	70.833	Pongo_abelii
ENSCPOG00000036973	-	91	79.478	ENSPPYG00000015533	-	96	79.851	Pongo_abelii
ENSCPOG00000036973	-	91	74.815	ENSPCAG00000004187	-	100	75.185	Procavia_capensis
ENSCPOG00000036973	-	89	63.534	ENSPCOG00000022307	-	100	65.789	Propithecus_coquereli
ENSCPOG00000036973	-	100	81.570	ENSPVAG00000005977	-	100	82.253	Pteropus_vampyrus
ENSCPOG00000036973	-	91	50.000	ENSPNYG00000014148	smn1	94	53.137	Pundamilia_nyererei
ENSCPOG00000036973	-	94	48.043	ENSPNAG00000014007	smn1	85	49.129	Pygocentrus_nattereri
ENSCPOG00000036973	-	100	75.932	ENSRNOG00000018067	Smn1	100	76.949	Rattus_norvegicus
ENSCPOG00000036973	-	95	69.176	ENSRBIG00000036775	-	95	69.534	Rhinopithecus_bieti
ENSCPOG00000036973	-	99	82.253	ENSRBIG00000037052	-	99	82.594	Rhinopithecus_bieti
ENSCPOG00000036973	-	99	82.253	ENSRROG00000039399	-	99	82.594	Rhinopithecus_roxellana
ENSCPOG00000036973	-	99	68.259	ENSRROG00000031088	-	99	67.577	Rhinopithecus_roxellana
ENSCPOG00000036973	-	99	82.131	ENSSBOG00000011665	-	99	82.818	Saimiri_boliviensis_boliviensis
ENSCPOG00000036973	-	83	75.397	ENSSBOG00000020112	-	87	72.222	Saimiri_boliviensis_boliviensis
ENSCPOG00000036973	-	99	65.870	ENSSHAG00000001499	-	100	64.982	Sarcophilus_harrisii
ENSCPOG00000036973	-	92	50.365	ENSSFOG00015015507	smn1	95	49.821	Scleropages_formosus
ENSCPOG00000036973	-	92	49.638	ENSSMAG00000007922	smn1	94	48.339	Scophthalmus_maximus
ENSCPOG00000036973	-	92	51.957	ENSSDUG00000018533	smn1	94	50.181	Seriola_dumerili
ENSCPOG00000036973	-	92	52.313	ENSSLDG00000021135	smn1	94	50.181	Seriola_lalandi_dorsalis
ENSCPOG00000036973	-	91	64.945	ENSSPUG00000000373	-	93	64.207	Sphenodon_punctatus
ENSCPOG00000036973	-	92	53.237	ENSSPAG00000004345	smn1	94	51.071	Stegastes_partitus
ENSCPOG00000036973	-	100	79.592	ENSSSCG00000016970	-	100	80.952	Sus_scrofa
ENSCPOG00000036973	-	96	59.220	ENSSSCG00000029127	-	97	59.516	Sus_scrofa
ENSCPOG00000036973	-	74	56.075	ENSSSCG00000033865	-	95	55.300	Sus_scrofa
ENSCPOG00000036973	-	92	59.489	ENSTGUG00000001548	-	99	58.394	Taeniopygia_guttata
ENSCPOG00000036973	-	92	48.214	ENSTRUG00000000736	smn	96	45.487	Takifugu_rubripes
ENSCPOG00000036973	-	92	48.029	ENSTNIG00000009892	smn1	94	47.500	Tetraodon_nigroviridis
ENSCPOG00000036973	-	62	82.065	ENSTBEG00000002399	-	93	80.513	Tupaia_belangeri
ENSCPOG00000036973	-	96	77.660	ENSTTRG00000005080	-	100	76.949	Tursiops_truncatus
ENSCPOG00000036973	-	62	80.978	ENSUAMG00000024947	-	70	79.487	Ursus_americanus
ENSCPOG00000036973	-	96	83.333	ENSUMAG00000007842	-	74	82.935	Ursus_maritimus
ENSCPOG00000036973	-	91	70.787	ENSVPAG00000009887	-	100	70.251	Vicugna_pacos
ENSCPOG00000036973	-	96	82.624	ENSVVUG00000006934	-	100	81.570	Vulpes_vulpes
ENSCPOG00000036973	-	90	37.500	ENSXETG00000004912	-	79	63.492	Xenopus_tropicalis
ENSCPOG00000036973	-	95	54.355	ENSXETG00000018189	smn2	95	54.196	Xenopus_tropicalis
ENSCPOG00000036973	-	92	52.143	ENSXMAG00000001521	smn1	94	51.095	Xiphophorus_maculatus