EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000037838 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: single-stranded DNA cytosine deaminase
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 7827 bases
Position: chrDS562883.1:1932547-1940373
Accession: 100729642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022751	APOBEC_N	PF08210.11	6.9e-63	1	1
ENSCPOP00000022751	APOBEC_C	PF05240.14	1.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000036231	-	543	XM_013152962	ENSCPOP00000022751	181 (aa)	-	A0A286XBG8

Gene Model

Click here to download ENSCPOG00000037838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000037838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000037838	-	94	32.955	ENSCPOG00000036103	APOBEC2	75	35.028
ENSCPOG00000037838	-	99	39.344	ENSCPOG00000009257	-	85	39.344
ENSCPOG00000037838	-	97	97.159	ENSCPOG00000030440	-	91	97.159
ENSCPOG00000037838	-	97	98.864	ENSCPOG00000039255	-	91	98.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000037838	-	100	92.818	ENSG00000111732	AICDA	97	92.857	Homo_sapiens
ENSCPOG00000037838	-	98	57.895	ENSAPOG00000023552	aicda	90	60.116	Acanthochromis_polyacanthus
ENSCPOG00000037838	-	99	93.855	ENSAMEG00000007082	AICDA	90	93.855	Ailuropoda_melanoleuca
ENSCPOG00000037838	-	98	62.011	ENSACIG00000012301	aicda	91	62.011	Amphilophus_citrinellus
ENSCPOG00000037838	-	99	59.669	ENSAOCG00000000482	aicda	91	59.669	Amphiprion_ocellaris
ENSCPOG00000037838	-	99	59.669	ENSAPEG00000009755	aicda	91	59.669	Amphiprion_percula
ENSCPOG00000037838	-	98	61.667	ENSATEG00000022035	aicda	88	61.667	Anabas_testudineus
ENSCPOG00000037838	-	99	88.268	ENSAPLG00000013954	AICDA	89	88.268	Anas_platyrhynchos
ENSCPOG00000037838	-	94	84.706	ENSACAG00000017441	AICDA	91	84.530	Anolis_carolinensis
ENSCPOG00000037838	-	100	92.818	ENSANAG00000022438	AICDA	91	92.818	Aotus_nancymaae
ENSCPOG00000037838	-	98	63.128	ENSACLG00000022679	aicda	91	63.128	Astatotilapia_calliptera
ENSCPOG00000037838	-	77	58.940	ENSAMXG00000037242	aicda	63	58.940	Astyanax_mexicanus
ENSCPOG00000037838	-	100	92.857	ENSBTAG00000018849	AICDA	91	92.857	Bos_taurus
ENSCPOG00000037838	-	100	92.818	ENSCJAG00000018856	AICDA	91	92.818	Callithrix_jacchus
ENSCPOG00000037838	-	100	93.370	ENSCAFG00000013897	AICDA	78	93.370	Canis_familiaris
ENSCPOG00000037838	-	100	92.265	ENSCAFG00020003515	AICDA	91	92.265	Canis_lupus_dingo
ENSCPOG00000037838	-	100	91.209	ENSCHIG00000012409	AICDA	91	91.209	Capra_hircus
ENSCPOG00000037838	-	100	89.503	ENSTSYG00000011304	AICDA	91	89.503	Carlito_syrichta
ENSCPOG00000037838	-	80	91.034	ENSCCAG00000030398	AICDA	91	91.034	Cebus_capucinus
ENSCPOG00000037838	-	100	93.923	ENSCATG00000039986	AICDA	96	93.571	Cercocebus_atys
ENSCPOG00000037838	-	99	93.855	ENSCSAG00000009663	AICDA	91	93.855	Chlorocebus_sabaeus
ENSCPOG00000037838	-	78	89.510	ENSCHOG00000010248	AICDA	72	89.510	Choloepus_hoffmanni
ENSCPOG00000037838	-	93	88.095	ENSCPBG00000014337	AICDA	90	88.268	Chrysemys_picta_bellii
ENSCPOG00000037838	-	100	93.923	ENSCANG00000035131	AICDA	91	93.923	Colobus_angolensis_palliatus
ENSCPOG00000037838	-	100	91.160	ENSCGRG00001009654	Aicda	91	91.160	Cricetulus_griseus_chok1gshd
ENSCPOG00000037838	-	100	91.160	ENSCGRG00000013829	Aicda	91	91.160	Cricetulus_griseus_crigri
ENSCPOG00000037838	-	99	58.333	ENSCSEG00000018589	aicda	90	58.333	Cynoglossus_semilaevis
ENSCPOG00000037838	-	99	60.989	ENSCVAG00000001218	aicda	91	60.989	Cyprinodon_variegatus
ENSCPOG00000037838	-	99	63.492	ENSDARG00000015734	aicda	90	63.492	Danio_rerio
ENSCPOG00000037838	-	99	88.827	ENSETEG00000014702	AICDA	99	88.827	Echinops_telfairi
ENSCPOG00000037838	-	100	91.160	ENSEASG00005015947	AICDA	91	91.160	Equus_asinus_asinus
ENSCPOG00000037838	-	100	92.818	ENSECAG00000018578	AICDA	91	92.818	Equus_caballus
ENSCPOG00000037838	-	99	89.944	ENSEEUG00000013899	AICDA	99	89.944	Erinaceus_europaeus
ENSCPOG00000037838	-	99	58.854	ENSELUG00000016293	aicda	90	58.854	Esox_lucius
ENSCPOG00000037838	-	100	93.923	ENSFCAG00000006052	AICDA	78	93.923	Felis_catus
ENSCPOG00000037838	-	99	81.006	ENSFALG00000007261	AICDA	91	81.006	Ficedula_albicollis
ENSCPOG00000037838	-	100	83.425	ENSFDAG00000011141	AICDA	100	83.425	Fukomys_damarensis
ENSCPOG00000037838	-	97	58.511	ENSFHEG00000015733	aicda	91	58.511	Fundulus_heteroclitus
ENSCPOG00000037838	-	99	59.896	ENSGMOG00000004114	aicda	90	59.896	Gadus_morhua
ENSCPOG00000037838	-	100	87.845	ENSGALG00000014280	AICDA	91	87.845	Gallus_gallus
ENSCPOG00000037838	-	98	55.556	ENSGAFG00000013758	aicda	87	55.556	Gambusia_affinis
ENSCPOG00000037838	-	99	56.250	ENSGACG00000010521	aicda	90	56.250	Gasterosteus_aculeatus
ENSCPOG00000037838	-	94	88.235	ENSGAGG00000011839	-	91	88.398	Gopherus_agassizii
ENSCPOG00000037838	-	93	88.095	ENSGAGG00000011838	-	90	88.268	Gopherus_agassizii
ENSCPOG00000037838	-	99	92.737	ENSGGOG00000003338	AICDA	90	92.737	Gorilla_gorilla
ENSCPOG00000037838	-	98	63.128	ENSHBUG00000014333	aicda	91	63.128	Haplochromis_burtoni
ENSCPOG00000037838	-	99	92.737	ENSHGLG00000001443	AICDA	90	92.737	Heterocephalus_glaber_female
ENSCPOG00000037838	-	94	92.353	ENSHGLG00100001381	AICDA	91	92.265	Heterocephalus_glaber_male
ENSCPOG00000037838	-	94	60.920	ENSHCOG00000018886	aicda	88	60.920	Hippocampus_comes
ENSCPOG00000037838	-	99	58.639	ENSIPUG00000007380	aicda	90	58.639	Ictalurus_punctatus
ENSCPOG00000037838	-	100	92.818	ENSSTOG00000010972	AICDA	91	92.818	Ictidomys_tridecemlineatus
ENSCPOG00000037838	-	100	94.475	ENSJJAG00000000908	Aicda	100	94.475	Jaculus_jaculus
ENSCPOG00000037838	-	99	61.326	ENSKMAG00000006359	aicda	91	61.326	Kryptolebias_marmoratus
ENSCPOG00000037838	-	99	56.842	ENSLBEG00000015351	aicda	92	57.812	Labrus_bergylta
ENSCPOG00000037838	-	77	69.286	ENSLACG00000009320	aicda	94	69.286	Latimeria_chalumnae
ENSCPOG00000037838	-	60	68.519	ENSLOCG00000008158	aicda	84	68.519	Lepisosteus_oculatus
ENSCPOG00000037838	-	99	92.737	ENSLAFG00000000721	AICDA	92	92.737	Loxodonta_africana
ENSCPOG00000037838	-	100	93.923	ENSMFAG00000037834	AICDA	96	93.571	Macaca_fascicularis
ENSCPOG00000037838	-	100	93.923	ENSMMUG00000019134	AICDA	96	93.571	Macaca_mulatta
ENSCPOG00000037838	-	100	93.923	ENSMNEG00000043421	AICDA	96	93.571	Macaca_nemestrina
ENSCPOG00000037838	-	72	95.385	ENSMLEG00000039759	-	89	84.868	Mandrillus_leucophaeus
ENSCPOG00000037838	-	100	93.923	ENSMLEG00000040938	AICDA	96	93.571	Mandrillus_leucophaeus
ENSCPOG00000037838	-	99	58.854	ENSMAMG00000020032	aicda	92	58.730	Mastacembelus_armatus
ENSCPOG00000037838	-	98	63.128	ENSMZEG00005016678	aicda	91	63.128	Maylandia_zebra
ENSCPOG00000037838	-	99	87.709	ENSMGAG00000013942	AICDA	91	87.709	Meleagris_gallopavo
ENSCPOG00000037838	-	100	91.160	ENSMAUG00000012229	Aicda	91	91.160	Mesocricetus_auratus
ENSCPOG00000037838	-	100	92.857	ENSMICG00000011695	AICDA	92	92.350	Microcebus_murinus
ENSCPOG00000037838	-	100	91.160	ENSMOCG00000022460	Aicda	91	91.160	Microtus_ochrogaster
ENSCPOG00000037838	-	99	59.375	ENSMMOG00000016707	aicda	90	59.375	Mola_mola
ENSCPOG00000037838	-	97	88.068	ENSMODG00000018002	AICDA	91	88.068	Monodelphis_domestica
ENSCPOG00000037838	-	99	57.812	ENSMALG00000010442	aicda	90	57.812	Monopterus_albus
ENSCPOG00000037838	-	78	92.254	MGP_CAROLIEiJ_G0028824	-	100	92.254	Mus_caroli
ENSCPOG00000037838	-	100	92.265	ENSMUSG00000040627	Aicda	91	92.265	Mus_musculus
ENSCPOG00000037838	-	100	91.713	MGP_PahariEiJ_G0022579	Aicda	91	91.713	Mus_pahari
ENSCPOG00000037838	-	100	92.265	MGP_SPRETEiJ_G0029856	Aicda	91	92.265	Mus_spretus
ENSCPOG00000037838	-	100	93.923	ENSMPUG00000017533	AICDA	86	93.923	Mustela_putorius_furo
ENSCPOG00000037838	-	99	92.737	ENSMLUG00000007881	AICDA	90	92.737	Myotis_lucifugus
ENSCPOG00000037838	-	100	92.818	ENSNGAG00000023430	Aicda	91	92.818	Nannospalax_galili
ENSCPOG00000037838	-	99	59.375	ENSNBRG00000000070	aicda	88	63.372	Neolamprologus_brichardi
ENSCPOG00000037838	-	100	92.265	ENSNLEG00000001917	AICDA	91	92.265	Nomascus_leucogenys
ENSCPOG00000037838	-	99	86.592	ENSMEUG00000006570	AICDA	90	86.592	Notamacropus_eugenii
ENSCPOG00000037838	-	98	88.764	ENSOPRG00000013486	AICDA	91	88.764	Ochotona_princeps
ENSCPOG00000037838	-	100	91.713	ENSODEG00000001235	AICDA	100	91.713	Octodon_degus
ENSCPOG00000037838	-	99	58.333	ENSONIG00000012823	aicda	90	58.333	Oreochromis_niloticus
ENSCPOG00000037838	-	93	91.071	ENSOANG00000007150	AICDA	90	91.061	Ornithorhynchus_anatinus
ENSCPOG00000037838	-	97	90.909	ENSOCUG00000023739	AICDA	91	90.909	Oryctolagus_cuniculus
ENSCPOG00000037838	-	99	60.440	ENSORLG00000011705	aicda	91	60.440	Oryzias_latipes
ENSCPOG00000037838	-	99	60.440	ENSORLG00020006547	aicda	91	60.440	Oryzias_latipes_hni
ENSCPOG00000037838	-	98	60.894	ENSORLG00015012504	aicda	89	60.894	Oryzias_latipes_hsok
ENSCPOG00000037838	-	99	60.440	ENSOMEG00000011880	aicda	89	60.440	Oryzias_melastigma
ENSCPOG00000037838	-	99	93.296	ENSOGAG00000026770	AICDA	90	93.296	Otolemur_garnettii
ENSCPOG00000037838	-	100	90.217	ENSOARG00000001982	AICDA	92	90.217	Ovis_aries
ENSCPOG00000037838	-	100	92.818	ENSPPAG00000038169	AICDA	91	92.818	Pan_paniscus
ENSCPOG00000037838	-	100	93.923	ENSPPRG00000012985	AICDA	91	93.923	Panthera_pardus
ENSCPOG00000037838	-	100	93.923	ENSPTIG00000020074	AICDA	91	93.923	Panthera_tigris_altaica
ENSCPOG00000037838	-	100	92.818	ENSPTRG00000004640	AICDA	91	92.818	Pan_troglodytes
ENSCPOG00000037838	-	100	93.923	ENSPANG00000017883	AICDA	96	93.571	Papio_anubis
ENSCPOG00000037838	-	90	62.791	ENSPKIG00000001499	aicda	91	62.791	Paramormyrops_kingsleyae
ENSCPOG00000037838	-	93	87.500	ENSPSIG00000013283	AICDA	91	87.709	Pelodiscus_sinensis
ENSCPOG00000037838	-	94	60.221	ENSPMGG00000014598	aicda	85	60.440	Periophthalmus_magnuspinnatus
ENSCPOG00000037838	-	100	90.608	ENSPEMG00000008352	Aicda	91	90.608	Peromyscus_maniculatus_bairdii
ENSCPOG00000037838	-	100	88.398	ENSPCIG00000023974	AICDA	91	88.398	Phascolarctos_cinereus
ENSCPOG00000037838	-	94	61.321	ENSPFOG00000011197	aicda	95	61.321	Poecilia_formosa
ENSCPOG00000037838	-	99	56.250	ENSPLAG00000014098	aicda	92	56.250	Poecilia_latipinna
ENSCPOG00000037838	-	99	56.250	ENSPMEG00000024203	aicda	90	56.250	Poecilia_mexicana
ENSCPOG00000037838	-	99	56.250	ENSPREG00000009041	aicda	90	56.250	Poecilia_reticulata
ENSCPOG00000037838	-	99	93.296	ENSPPYG00000004242	AICDA	91	93.296	Pongo_abelii
ENSCPOG00000037838	-	73	92.537	ENSPCOG00000003380	-	80	92.537	Propithecus_coquereli
ENSCPOG00000037838	-	100	95.028	ENSPVAG00000012185	AICDA	91	95.028	Pteropus_vampyrus
ENSCPOG00000037838	-	98	63.128	ENSPNYG00000000988	aicda	91	63.128	Pundamilia_nyererei
ENSCPOG00000037838	-	99	63.351	ENSPNAG00000019237	aicda	91	63.830	Pygocentrus_nattereri
ENSCPOG00000037838	-	100	91.160	ENSRNOG00000015478	Aicda	91	91.160	Rattus_norvegicus
ENSCPOG00000037838	-	100	93.923	ENSRBIG00000026659	AICDA	91	93.923	Rhinopithecus_bieti
ENSCPOG00000037838	-	100	93.923	ENSRROG00000032866	AICDA	91	93.923	Rhinopithecus_roxellana
ENSCPOG00000037838	-	80	91.724	ENSSBOG00000035758	AICDA	91	91.724	Saimiri_boliviensis_boliviensis
ENSCPOG00000037838	-	100	87.293	ENSSHAG00000008694	AICDA	91	87.293	Sarcophilus_harrisii
ENSCPOG00000037838	-	99	61.376	ENSSFOG00015001695	aicda	90	61.376	Scleropages_formosus
ENSCPOG00000037838	-	99	57.292	ENSSMAG00000012339	aicda	86	57.292	Scophthalmus_maximus
ENSCPOG00000037838	-	98	60.894	ENSSDUG00000009894	aicda	88	60.894	Seriola_dumerili
ENSCPOG00000037838	-	98	61.236	ENSSLDG00000023022	aicda	90	57.812	Seriola_lalandi_dorsalis
ENSCPOG00000037838	-	91	81.818	ENSSPUG00000009022	AICDA	89	81.818	Sphenodon_punctatus
ENSCPOG00000037838	-	99	56.771	ENSSPAG00000021499	aicda	60	56.771	Stegastes_partitus
ENSCPOG00000037838	-	100	92.818	ENSSSCG00000000667	AICDA	91	92.818	Sus_scrofa
ENSCPOG00000037838	-	99	79.888	ENSTGUG00000013115	AICDA	91	79.888	Taeniopygia_guttata
ENSCPOG00000037838	-	99	57.812	ENSTRUG00000007079	aicda	90	57.812	Takifugu_rubripes
ENSCPOG00000037838	-	98	58.421	ENSTNIG00000008118	aicda	89	58.421	Tetraodon_nigroviridis
ENSCPOG00000037838	-	67	87.603	ENSTBEG00000002559	AICDA	62	87.603	Tupaia_belangeri
ENSCPOG00000037838	-	100	93.956	ENSTTRG00000000703	AICDA	100	93.956	Tursiops_truncatus
ENSCPOG00000037838	-	95	94.767	ENSUAMG00000011642	AICDA	93	93.985	Ursus_americanus
ENSCPOG00000037838	-	95	94.767	ENSUMAG00000016540	AICDA	93	93.985	Ursus_maritimus
ENSCPOG00000037838	-	71	96.923	ENSVPAG00000003950	AICDA	88	96.923	Vicugna_pacos
ENSCPOG00000037838	-	98	71.508	ENSXETG00000023905	aicda	89	71.508	Xenopus_tropicalis
ENSCPOG00000037838	-	98	56.180	ENSXCOG00000019386	aicda	82	56.180	Xiphophorus_couchianus
ENSCPOG00000037838	-	98	57.865	ENSXMAG00000011889	aicda	83	57.865	Xiphophorus_maculatus