EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000037898 (Gene tree)
Gene ID: 101787829
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 60950 bases
Position: chrDS562858.1:36331407-36392356
Accession: 101787829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022615	Rif1_N	PF12231.8	1e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000035451	RIF1-201	7164	XM_005007696	ENSCPOP00000022615	2387 (aa)	-	A0A286XB07

Gene Model

Click here to download ENSCPOG00000037898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000037898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000037898	RIF1	99	71.360	ENSG00000080345	RIF1	97	84.903	Homo_sapiens
ENSCPOG00000037898	RIF1	55	44.535	ENSAPOG00000011073	rif1	53	44.162	Acanthochromis_polyacanthus
ENSCPOG00000037898	RIF1	99	71.365	ENSAMEG00000008461	RIF1	100	71.204	Ailuropoda_melanoleuca
ENSCPOG00000037898	RIF1	65	48.506	ENSACIG00000017765	rif1	69	48.098	Amphilophus_citrinellus
ENSCPOG00000037898	RIF1	55	45.448	ENSAOCG00000017231	rif1	54	45.082	Amphiprion_ocellaris
ENSCPOG00000037898	RIF1	69	53.077	ENSAPEG00000013228	rif1	67	52.659	Amphiprion_percula
ENSCPOG00000037898	RIF1	52	45.967	ENSATEG00000022887	rif1	54	44.762	Anabas_testudineus
ENSCPOG00000037898	RIF1	60	60.180	ENSACAG00000003714	RIF1	81	55.301	Anolis_carolinensis
ENSCPOG00000037898	RIF1	99	70.986	ENSANAG00000024840	RIF1	99	70.825	Aotus_nancymaae
ENSCPOG00000037898	RIF1	94	69.244	ENSBTAG00000021020	RIF1	99	69.244	Bos_taurus
ENSCPOG00000037898	RIF1	99	70.290	ENSCJAG00000003138	RIF1	99	70.166	Callithrix_jacchus
ENSCPOG00000037898	RIF1	99	69.747	ENSCAFG00000005670	RIF1	96	69.701	Canis_familiaris
ENSCPOG00000037898	RIF1	99	70.134	ENSCAFG00020016401	RIF1	99	70.090	Canis_lupus_dingo
ENSCPOG00000037898	RIF1	99	69.944	ENSCHIG00000020327	RIF1	99	69.817	Capra_hircus
ENSCPOG00000037898	RIF1	99	67.390	ENSTSYG00000008861	RIF1	100	67.270	Carlito_syrichta
ENSCPOG00000037898	RIF1	79	97.674	ENSCAPG00000008957	RIF1	95	97.674	Cavia_aperea
ENSCPOG00000037898	RIF1	99	69.392	ENSCCAG00000024760	RIF1	99	69.352	Cebus_capucinus
ENSCPOG00000037898	RIF1	99	71.066	ENSCATG00000033353	RIF1	99	71.066	Cercocebus_atys
ENSCPOG00000037898	RIF1	96	80.118	ENSCLAG00000001517	RIF1	100	80.076	Chinchilla_lanigera
ENSCPOG00000037898	RIF1	99	71.066	ENSCSAG00000016089	RIF1	99	71.066	Chlorocebus_sabaeus
ENSCPOG00000037898	RIF1	97	73.077	ENSCHOG00000007187	RIF1	96	73.077	Choloepus_hoffmanni
ENSCPOG00000037898	RIF1	92	65.879	ENSCPBG00000025885	RIF1	97	65.460	Chrysemys_picta_bellii
ENSCPOG00000037898	RIF1	99	69.698	ENSCANG00000028962	RIF1	100	70.240	Colobus_angolensis_palliatus
ENSCPOG00000037898	RIF1	99	67.171	ENSCGRG00001024589	Rif1	100	66.857	Cricetulus_griseus_chok1gshd
ENSCPOG00000037898	RIF1	98	67.558	ENSCGRG00000010713	Rif1	100	67.242	Cricetulus_griseus_crigri
ENSCPOG00000037898	RIF1	52	46.357	ENSCSEG00000003945	rif1	55	46.357	Cynoglossus_semilaevis
ENSCPOG00000037898	RIF1	64	46.636	ENSCVAG00000022479	rif1	66	46.890	Cyprinodon_variegatus
ENSCPOG00000037898	RIF1	52	48.454	ENSDARG00000062650	rif1	52	48.295	Danio_rerio
ENSCPOG00000037898	RIF1	99	67.703	ENSDNOG00000011194	RIF1	97	67.664	Dasypus_novemcinctus
ENSCPOG00000037898	RIF1	91	66.591	ENSETEG00000012421	RIF1	91	66.591	Echinops_telfairi
ENSCPOG00000037898	RIF1	95	85.342	ENSEASG00005023434	RIF1	99	85.342	Equus_asinus_asinus
ENSCPOG00000037898	RIF1	96	83.982	ENSECAG00000012679	RIF1	99	83.982	Equus_caballus
ENSCPOG00000037898	RIF1	63	48.434	ENSELUG00000006826	rif1	55	48.390	Esox_lucius
ENSCPOG00000037898	RIF1	99	69.972	ENSFCAG00000029742	RIF1	99	69.811	Felis_catus
ENSCPOG00000037898	RIF1	78	64.423	ENSFALG00000013874	RIF1	90	65.064	Ficedula_albicollis
ENSCPOG00000037898	RIF1	99	79.764	ENSFDAG00000006538	RIF1	99	79.724	Fukomys_damarensis
ENSCPOG00000037898	RIF1	63	48.230	ENSFHEG00000013721	rif1	65	47.815	Fundulus_heteroclitus
ENSCPOG00000037898	RIF1	55	47.199	ENSGMOG00000003517	rif1	81	47.382	Gadus_morhua
ENSCPOG00000037898	RIF1	80	61.111	ENSGALG00000012484	RIF1	92	60.733	Gallus_gallus
ENSCPOG00000037898	RIF1	62	51.911	ENSGAFG00000017196	rif1	66	50.989	Gambusia_affinis
ENSCPOG00000037898	RIF1	60	53.469	ENSGACG00000008579	rif1	63	54.032	Gasterosteus_aculeatus
ENSCPOG00000037898	RIF1	89	67.318	ENSGAGG00000012595	RIF1	98	68.436	Gopherus_agassizii
ENSCPOG00000037898	RIF1	89	85.127	ENSGGOG00000040178	RIF1	96	85.127	Gorilla_gorilla
ENSCPOG00000037898	RIF1	64	43.830	ENSHBUG00000007125	rif1	53	49.426	Haplochromis_burtoni
ENSCPOG00000037898	RIF1	94	80.128	ENSHGLG00100009807	RIF1	99	80.128	Heterocephalus_glaber_male
ENSCPOG00000037898	RIF1	65	46.797	ENSHCOG00000015943	rif1	59	47.407	Hippocampus_comes
ENSCPOG00000037898	RIF1	65	50.040	ENSIPUG00000021703	rif1	64	50.122	Ictalurus_punctatus
ENSCPOG00000037898	RIF1	99	72.300	ENSSTOG00000020712	RIF1	99	72.191	Ictidomys_tridecemlineatus
ENSCPOG00000037898	RIF1	99	66.311	ENSJJAG00000023000	Rif1	99	66.364	Jaculus_jaculus
ENSCPOG00000037898	RIF1	63	42.224	ENSKMAG00000002852	rif1	51	47.801	Kryptolebias_marmoratus
ENSCPOG00000037898	RIF1	66	48.706	ENSLBEG00000023196	rif1	60	48.860	Labrus_bergylta
ENSCPOG00000037898	RIF1	73	46.815	ENSLACG00000005425	RIF1	75	47.004	Latimeria_chalumnae
ENSCPOG00000037898	RIF1	83	46.951	ENSLOCG00000002657	rif1	87	46.637	Lepisosteus_oculatus
ENSCPOG00000037898	RIF1	99	69.697	ENSLAFG00000009796	RIF1	100	69.535	Loxodonta_africana
ENSCPOG00000037898	RIF1	99	71.227	ENSMFAG00000032233	RIF1	99	71.227	Macaca_fascicularis
ENSCPOG00000037898	RIF1	99	71.227	ENSMMUG00000008611	RIF1	99	71.308	Macaca_mulatta
ENSCPOG00000037898	RIF1	99	71.147	ENSMNEG00000031616	RIF1	99	71.147	Macaca_nemestrina
ENSCPOG00000037898	RIF1	99	71.227	ENSMLEG00000042945	RIF1	99	71.227	Mandrillus_leucophaeus
ENSCPOG00000037898	RIF1	59	48.332	ENSMAMG00000001745	rif1	58	48.182	Mastacembelus_armatus
ENSCPOG00000037898	RIF1	74	44.927	ENSMZEG00005020920	rif1	74	46.820	Maylandia_zebra
ENSCPOG00000037898	RIF1	92	51.476	ENSMGAG00000012732	RIF1	97	51.646	Meleagris_gallopavo
ENSCPOG00000037898	RIF1	94	84.848	ENSMAUG00000013158	Rif1	99	84.848	Mesocricetus_auratus
ENSCPOG00000037898	RIF1	99	72.870	ENSMICG00000046127	RIF1	99	72.950	Microcebus_murinus
ENSCPOG00000037898	RIF1	99	66.762	ENSMOCG00000009381	Rif1	100	66.735	Microtus_ochrogaster
ENSCPOG00000037898	RIF1	64	47.124	ENSMMOG00000006519	rif1	64	47.040	Mola_mola
ENSCPOG00000037898	RIF1	99	56.700	ENSMODG00000003703	RIF1	99	56.686	Monodelphis_domestica
ENSCPOG00000037898	RIF1	66	45.988	ENSMALG00000016759	rif1	71	46.850	Monopterus_albus
ENSCPOG00000037898	RIF1	99	66.653	MGP_CAROLIEiJ_G0023555	Rif1	100	66.653	Mus_caroli
ENSCPOG00000037898	RIF1	99	67.072	ENSMUSG00000036202	Rif1	100	67.072	Mus_musculus
ENSCPOG00000037898	RIF1	99	66.599	MGP_PahariEiJ_G0025006	Rif1	100	66.477	Mus_pahari
ENSCPOG00000037898	RIF1	99	66.951	MGP_SPRETEiJ_G0024476	Rif1	100	67.154	Mus_spretus
ENSCPOG00000037898	RIF1	99	70.390	ENSMPUG00000000371	RIF1	99	70.267	Mustela_putorius_furo
ENSCPOG00000037898	RIF1	89	67.577	ENSMLUG00000003376	RIF1	100	67.433	Myotis_lucifugus
ENSCPOG00000037898	RIF1	99	69.458	ENSNGAG00000009268	Rif1	99	69.581	Nannospalax_galili
ENSCPOG00000037898	RIF1	63	48.710	ENSNBRG00000014257	rif1	69	48.060	Neolamprologus_brichardi
ENSCPOG00000037898	RIF1	99	69.379	ENSNLEG00000010955	RIF1	99	69.551	Nomascus_leucogenys
ENSCPOG00000037898	RIF1	80	71.171	ENSMEUG00000007601	-	87	71.171	Notamacropus_eugenii
ENSCPOG00000037898	RIF1	100	80.098	ENSODEG00000003950	RIF1	100	80.098	Octodon_degus
ENSCPOG00000037898	RIF1	51	49.054	ENSONIG00000013657	rif1	56	49.304	Oreochromis_niloticus
ENSCPOG00000037898	RIF1	73	71.161	ENSOANG00000006078	-	74	71.161	Ornithorhynchus_anatinus
ENSCPOG00000037898	RIF1	99	69.628	ENSOCUG00000017435	RIF1	99	69.802	Oryctolagus_cuniculus
ENSCPOG00000037898	RIF1	64	46.477	ENSORLG00020001302	rif1	67	47.145	Oryzias_latipes_hni
ENSCPOG00000037898	RIF1	64	46.130	ENSORLG00015000009	rif1	66	46.867	Oryzias_latipes_hsok
ENSCPOG00000037898	RIF1	62	46.290	ENSOMEG00000021513	rif1	66	45.955	Oryzias_melastigma
ENSCPOG00000037898	RIF1	100	70.458	ENSOGAG00000006141	RIF1	100	70.338	Otolemur_garnettii
ENSCPOG00000037898	RIF1	99	70.399	ENSOARG00000008930	RIF1	99	70.195	Ovis_aries
ENSCPOG00000037898	RIF1	99	71.371	ENSPPAG00000023754	RIF1	99	71.291	Pan_paniscus
ENSCPOG00000037898	RIF1	99	69.892	ENSPPRG00000003618	RIF1	99	69.731	Panthera_pardus
ENSCPOG00000037898	RIF1	99	69.972	ENSPTIG00000020652	RIF1	99	69.811	Panthera_tigris_altaica
ENSCPOG00000037898	RIF1	99	71.452	ENSPTRG00000012534	RIF1	99	71.371	Pan_troglodytes
ENSCPOG00000037898	RIF1	99	70.986	ENSPANG00000008525	RIF1	99	71.026	Papio_anubis
ENSCPOG00000037898	RIF1	77	49.547	ENSPKIG00000004267	rif1	66	50.453	Paramormyrops_kingsleyae
ENSCPOG00000037898	RIF1	63	55.666	ENSPMGG00000016141	rif1	71	55.714	Periophthalmus_magnuspinnatus
ENSCPOG00000037898	RIF1	98	68.367	ENSPEMG00000000446	Rif1	99	68.076	Peromyscus_maniculatus_bairdii
ENSCPOG00000037898	RIF1	100	55.855	ENSPCIG00000009185	RIF1	99	56.518	Phascolarctos_cinereus
ENSCPOG00000037898	RIF1	64	48.722	ENSPLAG00000017945	rif1	68	48.653	Poecilia_latipinna
ENSCPOG00000037898	RIF1	67	46.854	ENSPREG00000018052	rif1	65	51.312	Poecilia_reticulata
ENSCPOG00000037898	RIF1	99	71.187	ENSPPYG00000012846	RIF1	99	71.360	Pongo_abelii
ENSCPOG00000037898	RIF1	82	83.495	ENSPCAG00000009032	RIF1	83	83.495	Procavia_capensis
ENSCPOG00000037898	RIF1	99	72.669	ENSPCOG00000027888	RIF1	99	72.709	Propithecus_coquereli
ENSCPOG00000037898	RIF1	92	82.020	ENSPVAG00000014276	RIF1	95	82.020	Pteropus_vampyrus
ENSCPOG00000037898	RIF1	74	44.606	ENSPNYG00000012940	rif1	73	45.192	Pundamilia_nyererei
ENSCPOG00000037898	RIF1	99	65.083	ENSRNOG00000054901	Rif1	100	65.138	Rattus_norvegicus
ENSCPOG00000037898	RIF1	99	70.423	ENSRBIG00000003704	RIF1	99	70.475	Rhinopithecus_bieti
ENSCPOG00000037898	RIF1	99	71.187	ENSRROG00000028206	RIF1	99	71.400	Rhinopithecus_roxellana
ENSCPOG00000037898	RIF1	97	86.022	ENSSBOG00000029530	RIF1	99	86.022	Saimiri_boliviensis_boliviensis
ENSCPOG00000037898	RIF1	68	47.695	ENSSMAG00000011704	rif1	63	47.654	Scophthalmus_maximus
ENSCPOG00000037898	RIF1	63	48.279	ENSSDUG00000015632	rif1	67	47.805	Seriola_dumerili
ENSCPOG00000037898	RIF1	50	48.343	ENSSLDG00000019531	rif1	51	47.559	Seriola_lalandi_dorsalis
ENSCPOG00000037898	RIF1	60	82.653	ENSSARG00000007161	-	61	82.653	Sorex_araneus
ENSCPOG00000037898	RIF1	89	63.255	ENSSPUG00000003062	RIF1	96	63.255	Sphenodon_punctatus
ENSCPOG00000037898	RIF1	52	53.593	ENSSPAG00000018359	rif1	73	53.138	Stegastes_partitus
ENSCPOG00000037898	RIF1	99	70.406	ENSSSCG00000016395	RIF1	99	70.446	Sus_scrofa
ENSCPOG00000037898	RIF1	66	47.344	ENSTRUG00000015808	rif1	69	47.322	Takifugu_rubripes
ENSCPOG00000037898	RIF1	65	49.235	ENSTNIG00000011538	rif1	67	49.235	Tetraodon_nigroviridis
ENSCPOG00000037898	RIF1	80	89.172	ENSTBEG00000016082	RIF1	80	89.172	Tupaia_belangeri
ENSCPOG00000037898	RIF1	99	71.354	ENSTTRG00000011190	RIF1	99	71.193	Tursiops_truncatus
ENSCPOG00000037898	RIF1	90	69.577	ENSUAMG00000026385	RIF1	99	69.399	Ursus_americanus
ENSCPOG00000037898	RIF1	99	70.941	ENSUMAG00000000337	RIF1	99	70.780	Ursus_maritimus
ENSCPOG00000037898	RIF1	99	68.921	ENSVPAG00000002162	RIF1	99	68.795	Vicugna_pacos
ENSCPOG00000037898	RIF1	99	69.779	ENSVVUG00000011293	RIF1	99	69.733	Vulpes_vulpes
ENSCPOG00000037898	RIF1	59	62.424	ENSXETG00000004530	rif1	84	62.424	Xenopus_tropicalis