EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000038489 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 1023 bases
Position: chrDS562951.1:4717103-4718125
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030467	zf-C2H2	PF00096.26	9.9e-14	1	2
ENSCPOP00000030467	zf-C2H2	PF00096.26	9.9e-14	2	2
ENSCPOP00000030467	zf-met	PF12874.7	6e-09	1	2
ENSCPOP00000030467	zf-met	PF12874.7	6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000031686	-	381	-	ENSCPOP00000030467	127 (aa)	-	A0A286XY14

Gene Model

Click here to download ENSCPOG00000038489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000038489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000038489	-	99	90.000	ENSCGRG00000000462	Sall4	99	81.250	Cricetulus_griseus_crigri
ENSCPOG00000038489	-	98	89.516	ENSSTOG00000025002	SALL4	98	89.516	Ictidomys_tridecemlineatus
ENSCPOG00000038489	-	98	91.429	ENSJJAG00000020688	Sall4	98	88.000	Jaculus_jaculus
ENSCPOG00000038489	-	99	85.714	ENSMAUG00000015814	Sall4	99	80.469	Mesocricetus_auratus
ENSCPOG00000038489	-	99	88.732	ENSMOCG00000018245	Sall4	99	83.721	Microtus_ochrogaster
ENSCPOG00000038489	-	99	91.429	MGP_CAROLIEiJ_G0024723	Sall4	99	79.231	Mus_caroli
ENSCPOG00000038489	-	99	91.429	ENSMUSG00000027547	Sall4	99	79.231	Mus_musculus
ENSCPOG00000038489	-	99	92.857	MGP_PahariEiJ_G0026164	Sall4	99	80.000	Mus_pahari
ENSCPOG00000038489	-	99	91.429	MGP_SPRETEiJ_G0025643	Sall4	99	79.231	Mus_spretus
ENSCPOG00000038489	-	99	91.429	ENSPEMG00000022706	Sall4	99	85.938	Peromyscus_maniculatus_bairdii