EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000038597 (Gene tree)
Gene ID: 100726991
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 166638 bases
Position: chrDS562985.1:49966-216603
Accession: 100726991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000025359	RRM_1	PF00076.22	1e-11	1	1
ENSCPOP00000011519	RRM_1	PF00076.22	1e-11	1	1
ENSCPOP00000025705	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012924	RBPMS-202	600	-	ENSCPOP00000011519	199 (aa)	-	H0VM93
ENSCPOT00000038554	RBPMS-201	2463	XM_003462610	ENSCPOP00000025359	196 (aa)	XP_003462658	A0A286XIT1
ENSCPOT00000042126	RBPMS-203	4290	XM_003462609	ENSCPOP00000025705	219 (aa)	XP_003462657	A0A286XJN5

Gene Model

Click here to download ENSCPOG00000038597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000038597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000038597	RBPMS	89	70.950	ENSCPOG00000007695	RBPMS2	100	70.950

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000038597	RBPMS	100	99.087	ENSG00000157110	RBPMS	100	100.000	Homo_sapiens
ENSCPOG00000038597	RBPMS	99	84.021	ENSAPOG00000022304	RBPMS	99	84.021	Acanthochromis_polyacanthus
ENSCPOG00000038597	RBPMS	93	98.039	ENSAMEG00000001522	RBPMS	93	98.039	Ailuropoda_melanoleuca
ENSCPOG00000038597	RBPMS	66	78.676	ENSACIG00000011395	RBPMS	77	76.923	Amphilophus_citrinellus
ENSCPOG00000038597	RBPMS	99	84.021	ENSAOCG00000007731	RBPMS	99	84.021	Amphiprion_ocellaris
ENSCPOG00000038597	RBPMS	99	84.021	ENSAPEG00000023543	RBPMS	99	84.021	Amphiprion_percula
ENSCPOG00000038597	RBPMS	99	84.021	ENSATEG00000018184	RBPMS	99	84.021	Anabas_testudineus
ENSCPOG00000038597	RBPMS	99	94.359	ENSACAG00000003012	RBPMS	99	94.359	Anolis_carolinensis
ENSCPOG00000038597	RBPMS	100	99.087	ENSANAG00000028150	RBPMS	100	99.087	Aotus_nancymaae
ENSCPOG00000038597	RBPMS	99	84.536	ENSACLG00000002926	RBPMS	99	84.536	Astatotilapia_calliptera
ENSCPOG00000038597	RBPMS	100	82.653	ENSAMXG00000033491	rbpms	100	82.653	Astyanax_mexicanus
ENSCPOG00000038597	RBPMS	100	98.174	ENSBTAG00000033727	RBPMS	100	98.174	Bos_taurus
ENSCPOG00000038597	RBPMS	100	98.980	ENSCJAG00000012366	RBPMS	100	98.980	Callithrix_jacchus
ENSCPOG00000038597	RBPMS	100	99.087	ENSCAFG00000006503	RBPMS	100	99.087	Canis_familiaris
ENSCPOG00000038597	RBPMS	100	99.087	ENSCAFG00020001031	RBPMS	100	99.087	Canis_lupus_dingo
ENSCPOG00000038597	RBPMS	100	91.878	ENSCHIG00000027156	RBPMS	100	91.878	Capra_hircus
ENSCPOG00000038597	RBPMS	56	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
ENSCPOG00000038597	RBPMS	100	98.980	ENSCCAG00000033226	RBPMS	100	98.980	Cebus_capucinus
ENSCPOG00000038597	RBPMS	100	99.087	ENSCATG00000036486	RBPMS	100	99.087	Cercocebus_atys
ENSCPOG00000038597	RBPMS	90	100.000	ENSCLAG00000001518	RBPMS	100	100.000	Chinchilla_lanigera
ENSCPOG00000038597	RBPMS	100	99.087	ENSCSAG00000015838	RBPMS	100	99.087	Chlorocebus_sabaeus
ENSCPOG00000038597	RBPMS	90	99.492	ENSCHOG00000008745	RBPMS	100	99.492	Choloepus_hoffmanni
ENSCPOG00000038597	RBPMS	99	92.784	ENSCPBG00000013437	RBPMS	99	92.784	Chrysemys_picta_bellii
ENSCPOG00000038597	RBPMS	90	100.000	ENSCANG00000034997	RBPMS	100	100.000	Colobus_angolensis_palliatus
ENSCPOG00000038597	RBPMS	100	98.182	ENSCGRG00001002814	Rbpms	100	98.182	Cricetulus_griseus_chok1gshd
ENSCPOG00000038597	RBPMS	90	99.495	ENSCGRG00000006095	Rbpms	100	99.495	Cricetulus_griseus_crigri
ENSCPOG00000038597	RBPMS	100	83.673	ENSCSEG00000002777	rbpms	99	85.714	Cynoglossus_semilaevis
ENSCPOG00000038597	RBPMS	99	84.021	ENSCVAG00000013975	RBPMS	99	84.021	Cyprinodon_variegatus
ENSCPOG00000038597	RBPMS	87	67.647	ENSDARG00000099396	rbpms	100	67.647	Danio_rerio
ENSCPOG00000038597	RBPMS	100	95.890	ENSDNOG00000008126	RBPMS	100	95.890	Dasypus_novemcinctus
ENSCPOG00000038597	RBPMS	100	98.174	ENSETEG00000017582	RBPMS	100	98.174	Echinops_telfairi
ENSCPOG00000038597	RBPMS	90	100.000	ENSEASG00005016962	RBPMS	99	100.000	Equus_asinus_asinus
ENSCPOG00000038597	RBPMS	100	99.087	ENSECAG00000020735	RBPMS	100	99.087	Equus_caballus
ENSCPOG00000038597	RBPMS	100	82.143	ENSELUG00000009787	rbpms	100	82.143	Esox_lucius
ENSCPOG00000038597	RBPMS	88	54.651	ENSFCAG00000022292	-	93	51.282	Felis_catus
ENSCPOG00000038597	RBPMS	100	99.087	ENSFCAG00000025639	-	100	99.087	Felis_catus
ENSCPOG00000038597	RBPMS	90	99.492	ENSFDAG00000012078	RBPMS	100	100.000	Fukomys_damarensis
ENSCPOG00000038597	RBPMS	99	84.536	ENSFHEG00000000618	rbpms	99	84.536	Fundulus_heteroclitus
ENSCPOG00000038597	RBPMS	77	56.291	ENSGMOG00000009646	-	100	56.291	Gadus_morhua
ENSCPOG00000038597	RBPMS	99	84.021	ENSGAFG00000016566	RBPMS	99	84.021	Gambusia_affinis
ENSCPOG00000038597	RBPMS	100	76.020	ENSGACG00000019471	rbpms	100	76.020	Gasterosteus_aculeatus
ENSCPOG00000038597	RBPMS	64	88.889	ENSGAGG00000023634	RBPMS	56	86.567	Gopherus_agassizii
ENSCPOG00000038597	RBPMS	99	84.536	ENSHBUG00000005888	RBPMS	99	84.536	Haplochromis_burtoni
ENSCPOG00000038597	RBPMS	100	99.087	ENSHGLG00000002303	RBPMS	100	99.087	Heterocephalus_glaber_female
ENSCPOG00000038597	RBPMS	90	100.000	ENSHGLG00100008787	RBPMS	100	100.000	Heterocephalus_glaber_male
ENSCPOG00000038597	RBPMS	97	85.340	ENSHCOG00000005774	rbpms	99	85.340	Hippocampus_comes
ENSCPOG00000038597	RBPMS	97	79.581	ENSIPUG00000012459	RBPMS	99	79.581	Ictalurus_punctatus
ENSCPOG00000038597	RBPMS	100	99.087	ENSSTOG00000026546	RBPMS	100	99.087	Ictidomys_tridecemlineatus
ENSCPOG00000038597	RBPMS	100	98.630	ENSJJAG00000014024	Rbpms	100	98.630	Jaculus_jaculus
ENSCPOG00000038597	RBPMS	89	68.750	ENSKMAG00000006377	RBPMS	88	71.186	Kryptolebias_marmoratus
ENSCPOG00000038597	RBPMS	100	84.184	ENSLBEG00000027989	RBPMS	97	87.931	Labrus_bergylta
ENSCPOG00000038597	RBPMS	91	86.592	ENSLOCG00000013199	RBPMS	98	86.592	Lepisosteus_oculatus
ENSCPOG00000038597	RBPMS	100	98.630	ENSLAFG00000000209	RBPMS	100	98.630	Loxodonta_africana
ENSCPOG00000038597	RBPMS	100	99.087	ENSMFAG00000036911	RBPMS	100	99.087	Macaca_fascicularis
ENSCPOG00000038597	RBPMS	100	99.087	ENSMMUG00000000458	RBPMS	100	99.087	Macaca_mulatta
ENSCPOG00000038597	RBPMS	100	99.087	ENSMNEG00000043805	RBPMS	100	99.087	Macaca_nemestrina
ENSCPOG00000038597	RBPMS	90	100.000	ENSMLEG00000015635	RBPMS	100	100.000	Mandrillus_leucophaeus
ENSCPOG00000038597	RBPMS	92	67.778	ENSMAMG00000004604	RBPMS	92	67.778	Mastacembelus_armatus
ENSCPOG00000038597	RBPMS	99	84.536	ENSMZEG00005000698	RBPMS	97	87.429	Maylandia_zebra
ENSCPOG00000038597	RBPMS	89	96.571	ENSMGAG00000005088	RBPMS	90	96.571	Meleagris_gallopavo
ENSCPOG00000038597	RBPMS	100	98.182	ENSMAUG00000018892	Rbpms	100	98.182	Mesocricetus_auratus
ENSCPOG00000038597	RBPMS	100	97.449	ENSMICG00000001295	RBPMS	100	97.449	Microcebus_murinus
ENSCPOG00000038597	RBPMS	100	98.182	ENSMOCG00000014009	Rbpms	100	98.182	Microtus_ochrogaster
ENSCPOG00000038597	RBPMS	82	86.250	ENSMMOG00000012036	RBPMS	66	87.821	Mola_mola
ENSCPOG00000038597	RBPMS	96	94.180	ENSMODG00000019006	RBPMS	92	91.795	Monodelphis_domestica
ENSCPOG00000038597	RBPMS	99	82.990	ENSMALG00000003261	RBPMS	99	82.990	Monopterus_albus
ENSCPOG00000038597	RBPMS	100	98.182	MGP_CAROLIEiJ_G0030970	Rbpms	100	98.182	Mus_caroli
ENSCPOG00000038597	RBPMS	100	98.182	ENSMUSG00000031586	Rbpms	100	98.182	Mus_musculus
ENSCPOG00000038597	RBPMS	100	98.636	MGP_PahariEiJ_G0021439	Rbpms	100	98.636	Mus_pahari
ENSCPOG00000038597	RBPMS	100	98.182	MGP_SPRETEiJ_G0032087	Rbpms	100	98.182	Mus_spretus
ENSCPOG00000038597	RBPMS	93	98.039	ENSMPUG00000011314	RBPMS	93	98.039	Mustela_putorius_furo
ENSCPOG00000038597	RBPMS	100	97.959	ENSMLUG00000009391	RBPMS	100	97.959	Myotis_lucifugus
ENSCPOG00000038597	RBPMS	100	99.087	ENSNGAG00000011141	Rbpms	100	99.087	Nannospalax_galili
ENSCPOG00000038597	RBPMS	89	87.429	ENSNBRG00000003313	RBPMS	97	87.429	Neolamprologus_brichardi
ENSCPOG00000038597	RBPMS	100	98.630	ENSNLEG00000036183	-	100	98.630	Nomascus_leucogenys
ENSCPOG00000038597	RBPMS	100	78.539	ENSOPRG00000013151	RBPMS	100	78.539	Ochotona_princeps
ENSCPOG00000038597	RBPMS	100	99.087	ENSODEG00000006700	RBPMS	100	99.087	Octodon_degus
ENSCPOG00000038597	RBPMS	89	87.429	ENSONIG00000007546	RBPMS	100	87.429	Oreochromis_niloticus
ENSCPOG00000038597	RBPMS	100	98.630	ENSOCUG00000008572	RBPMS	100	98.630	Oryctolagus_cuniculus
ENSCPOG00000038597	RBPMS	100	83.673	ENSORLG00000004135	-	100	83.673	Oryzias_latipes
ENSCPOG00000038597	RBPMS	100	84.184	ENSORLG00020016179	RBPMS	100	84.184	Oryzias_latipes_hni
ENSCPOG00000038597	RBPMS	100	84.184	ENSORLG00015013770	RBPMS	100	84.184	Oryzias_latipes_hsok
ENSCPOG00000038597	RBPMS	99	84.021	ENSOMEG00000005044	RBPMS	99	84.021	Oryzias_melastigma
ENSCPOG00000038597	RBPMS	92	96.685	ENSOGAG00000030298	RBPMS	81	96.685	Otolemur_garnettii
ENSCPOG00000038597	RBPMS	64	92.857	ENSOARG00000010366	RBPMS	94	88.722	Ovis_aries
ENSCPOG00000038597	RBPMS	90	100.000	ENSPPAG00000033108	RBPMS	100	100.000	Pan_paniscus
ENSCPOG00000038597	RBPMS	100	99.087	ENSPPRG00000004836	RBPMS	100	99.087	Panthera_pardus
ENSCPOG00000038597	RBPMS	90	100.000	ENSPTIG00000015964	RBPMS	90	100.000	Panthera_tigris_altaica
ENSCPOG00000038597	RBPMS	100	99.087	ENSPTRG00000020135	RBPMS	100	99.087	Pan_troglodytes
ENSCPOG00000038597	RBPMS	100	99.087	ENSPANG00000008143	RBPMS	100	99.087	Papio_anubis
ENSCPOG00000038597	RBPMS	96	80.423	ENSPKIG00000004836	rbpms	99	80.423	Paramormyrops_kingsleyae
ENSCPOG00000038597	RBPMS	99	81.959	ENSPKIG00000000535	-	99	81.959	Paramormyrops_kingsleyae
ENSCPOG00000038597	RBPMS	89	95.402	ENSPSIG00000006136	RBPMS	99	95.402	Pelodiscus_sinensis
ENSCPOG00000038597	RBPMS	81	87.421	ENSPMGG00000018012	RBPMS	91	75.248	Periophthalmus_magnuspinnatus
ENSCPOG00000038597	RBPMS	100	96.970	ENSPEMG00000021130	Rbpms	100	96.970	Peromyscus_maniculatus_bairdii
ENSCPOG00000038597	RBPMS	90	96.591	ENSPCIG00000019298	-	81	79.899	Phascolarctos_cinereus
ENSCPOG00000038597	RBPMS	99	84.021	ENSPFOG00000017158	RBPMS	99	84.021	Poecilia_formosa
ENSCPOG00000038597	RBPMS	99	84.021	ENSPLAG00000010767	RBPMS	99	84.021	Poecilia_latipinna
ENSCPOG00000038597	RBPMS	99	84.021	ENSPMEG00000009788	RBPMS	99	84.021	Poecilia_mexicana
ENSCPOG00000038597	RBPMS	99	84.021	ENSPREG00000016959	RBPMS	99	84.021	Poecilia_reticulata
ENSCPOG00000038597	RBPMS	100	99.087	ENSPPYG00000018487	RBPMS	100	99.087	Pongo_abelii
ENSCPOG00000038597	RBPMS	56	98.182	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
ENSCPOG00000038597	RBPMS	100	86.301	ENSPCOG00000015948	RBPMS	100	86.301	Propithecus_coquereli
ENSCPOG00000038597	RBPMS	99	97.706	ENSPVAG00000001661	RBPMS	99	97.706	Pteropus_vampyrus
ENSCPOG00000038597	RBPMS	99	84.536	ENSPNYG00000001172	RBPMS	97	87.429	Pundamilia_nyererei
ENSCPOG00000038597	RBPMS	100	83.163	ENSPNAG00000029160	RBPMS	100	83.163	Pygocentrus_nattereri
ENSCPOG00000038597	RBPMS	100	98.182	ENSRNOG00000013328	Rbpms	100	98.182	Rattus_norvegicus
ENSCPOG00000038597	RBPMS	98	93.023	ENSRBIG00000038218	RBPMS	100	100.000	Rhinopithecus_bieti
ENSCPOG00000038597	RBPMS	100	99.087	ENSRROG00000042518	RBPMS	100	99.087	Rhinopithecus_roxellana
ENSCPOG00000038597	RBPMS	100	98.630	ENSSBOG00000026670	RBPMS	100	98.630	Saimiri_boliviensis_boliviensis
ENSCPOG00000038597	RBPMS	99	90.722	ENSSHAG00000010114	RBPMS	99	90.722	Sarcophilus_harrisii
ENSCPOG00000038597	RBPMS	89	82.759	ENSSFOG00015017481	-	99	79.894	Scleropages_formosus
ENSCPOG00000038597	RBPMS	99	82.990	ENSSFOG00015000417	rbpms	99	82.990	Scleropages_formosus
ENSCPOG00000038597	RBPMS	99	85.052	ENSSMAG00000010871	rbpms	99	85.052	Scophthalmus_maximus
ENSCPOG00000038597	RBPMS	99	84.021	ENSSDUG00000010894	RBPMS	99	84.021	Seriola_dumerili
ENSCPOG00000038597	RBPMS	99	84.021	ENSSLDG00000012916	RBPMS	99	84.021	Seriola_lalandi_dorsalis
ENSCPOG00000038597	RBPMS	100	94.521	ENSSARG00000000274	RBPMS	100	94.521	Sorex_araneus
ENSCPOG00000038597	RBPMS	98	90.722	ENSSPUG00000017525	RBPMS	74	90.722	Sphenodon_punctatus
ENSCPOG00000038597	RBPMS	89	68.966	ENSSPAG00000004777	rbpms	92	79.470	Stegastes_partitus
ENSCPOG00000038597	RBPMS	100	99.087	ENSSSCG00000015846	RBPMS	100	99.087	Sus_scrofa
ENSCPOG00000038597	RBPMS	97	93.158	ENSTGUG00000001776	RBPMS	100	93.158	Taeniopygia_guttata
ENSCPOG00000038597	RBPMS	100	84.184	ENSTRUG00000000041	RBPMS	100	84.184	Takifugu_rubripes
ENSCPOG00000038597	RBPMS	100	97.260	ENSTTRG00000012451	RBPMS	100	97.260	Tursiops_truncatus
ENSCPOG00000038597	RBPMS	59	95.690	ENSUAMG00000026353	RBPMS	78	94.118	Ursus_americanus
ENSCPOG00000038597	RBPMS	90	99.495	ENSUMAG00000007347	RBPMS	96	99.495	Ursus_maritimus
ENSCPOG00000038597	RBPMS	90	100.000	ENSVPAG00000010991	RBPMS	100	100.000	Vicugna_pacos
ENSCPOG00000038597	RBPMS	100	99.087	ENSVVUG00000019770	RBPMS	100	99.087	Vulpes_vulpes
ENSCPOG00000038597	RBPMS	89	93.678	ENSXETG00000011290	rbpms	100	93.678	Xenopus_tropicalis
ENSCPOG00000038597	RBPMS	89	81.143	ENSXCOG00000002436	RBPMS	90	81.143	Xiphophorus_couchianus
ENSCPOG00000038597	RBPMS	99	84.021	ENSXMAG00000027637	RBPMS	99	84.021	Xiphophorus_maculatus