EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000038986 (Gene tree)
Gene ID: 100728493
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 12834 bases
Position: chrDS562945.1:598133-610966
Accession: 100728493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022504	Nop52	PF05997.12	3.5e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000041986	RRP1-201	5120	XM_005000996	ENSCPOP00000022504	448 (aa)	XP_005001053	A0A286XAR5

Gene Model

Click here to download ENSCPOG00000038986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000038986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000038986	RRP1	98	65.652	ENSG00000160214	RRP1	96	90.698	Homo_sapiens
ENSCPOG00000038986	RRP1	99	66.739	ENSAMEG00000011448	RRP1	99	68.071	Ailuropoda_melanoleuca
ENSCPOG00000038986	RRP1	62	51.773	ENSACIG00000019121	rrp1	57	51.930	Amphilophus_citrinellus
ENSCPOG00000038986	RRP1	75	52.083	ENSAOCG00000017894	-	75	49.716	Amphiprion_ocellaris
ENSCPOG00000038986	RRP1	75	74.706	ENSANAG00000037815	RRP1	98	63.696	Aotus_nancymaae
ENSCPOG00000038986	RRP1	99	62.832	ENSBTAG00000003981	RRP1	99	63.415	Bos_taurus
ENSCPOG00000038986	RRP1	86	72.081	ENSCJAG00000043205	RRP1	83	67.123	Callithrix_jacchus
ENSCPOG00000038986	RRP1	97	68.820	ENSCAFG00000010646	RRP1	97	67.621	Canis_familiaris
ENSCPOG00000038986	RRP1	97	68.820	ENSCAFG00020018979	RRP1	97	67.621	Canis_lupus_dingo
ENSCPOG00000038986	RRP1	99	64.758	ENSCHIG00000020948	RRP1	99	62.826	Capra_hircus
ENSCPOG00000038986	RRP1	100	64.026	ENSTSYG00000012831	RRP1	99	62.766	Carlito_syrichta
ENSCPOG00000038986	RRP1	72	90.028	ENSCAPG00000008576	RRP1	88	90.028	Cavia_aperea
ENSCPOG00000038986	RRP1	88	73.383	ENSCCAG00000029828	RRP1	99	65.116	Cebus_capucinus
ENSCPOG00000038986	RRP1	80	50.000	ENSCCAG00000029384	RRP1B	51	52.493	Cebus_capucinus
ENSCPOG00000038986	RRP1	98	66.449	ENSCATG00000015632	RRP1	98	67.974	Cercocebus_atys
ENSCPOG00000038986	RRP1	100	80.667	ENSCLAG00000011639	RRP1	100	80.222	Chinchilla_lanigera
ENSCPOG00000038986	RRP1	74	49.704	ENSCLAG00000005622	RRP1B	53	45.411	Chinchilla_lanigera
ENSCPOG00000038986	RRP1	72	76.000	ENSCSAG00000007936	RRP1	98	76.000	Chlorocebus_sabaeus
ENSCPOG00000038986	RRP1	74	43.072	ENSCHOG00000002426	-	55	43.114	Choloepus_hoffmanni
ENSCPOG00000038986	RRP1	74	34.513	ENSCING00000003304	-	73	34.513	Ciona_intestinalis
ENSCPOG00000038986	RRP1	90	61.481	ENSCANG00000042611	RRP1	84	61.275	Colobus_angolensis_palliatus
ENSCPOG00000038986	RRP1	75	49.854	ENSCGRG00001023882	-	62	66.667	Cricetulus_griseus_chok1gshd
ENSCPOG00000038986	RRP1	99	65.055	ENSCGRG00001011920	Rrp1	99	65.275	Cricetulus_griseus_chok1gshd
ENSCPOG00000038986	RRP1	99	65.055	ENSCGRG00000008915	Rrp1	99	65.275	Cricetulus_griseus_crigri
ENSCPOG00000038986	RRP1	76	50.000	ENSCSEG00000020711	-	65	50.872	Cynoglossus_semilaevis
ENSCPOG00000038986	RRP1	77	46.197	ENSCVAG00000017568	-	88	45.977	Cyprinodon_variegatus
ENSCPOG00000038986	RRP1	99	65.359	ENSDNOG00000019880	RRP1	99	64.924	Dasypus_novemcinctus
ENSCPOG00000038986	RRP1	97	45.880	ENSDNOG00000032774	RRP1B	59	45.657	Dasypus_novemcinctus
ENSCPOG00000038986	RRP1	90	64.320	ENSDORG00000002104	Rrp1	99	64.269	Dipodomys_ordii
ENSCPOG00000038986	RRP1	73	61.846	ENSETEG00000002963	-	73	61.846	Echinops_telfairi
ENSCPOG00000038986	RRP1	97	68.539	ENSEASG00005001673	RRP1	99	67.793	Equus_asinus_asinus
ENSCPOG00000038986	RRP1	97	67.720	ENSECAG00000015703	RRP1	99	68.243	Equus_caballus
ENSCPOG00000038986	RRP1	92	42.404	ENSELUG00000015885	-	96	49.138	Esox_lucius
ENSCPOG00000038986	RRP1	90	70.617	ENSFCAG00000008434	RRP1	99	67.473	Felis_catus
ENSCPOG00000038986	RRP1	100	77.283	ENSFDAG00000013728	RRP1	100	76.667	Fukomys_damarensis
ENSCPOG00000038986	RRP1	86	45.052	ENSGACG00000001438	rrp1	52	48.824	Gasterosteus_aculeatus
ENSCPOG00000038986	RRP1	98	66.087	ENSGGOG00000000173	RRP1	98	67.171	Gorilla_gorilla
ENSCPOG00000038986	RRP1	100	76.991	ENSHGLG00000017085	RRP1	96	76.549	Heterocephalus_glaber_female
ENSCPOG00000038986	RRP1	76	45.556	ENSIPUG00000000673	-	68	45.556	Ictalurus_punctatus
ENSCPOG00000038986	RRP1	94	70.901	ENSSTOG00000011116	RRP1	99	70.439	Ictidomys_tridecemlineatus
ENSCPOG00000038986	RRP1	99	67.929	ENSJJAG00000018886	Rrp1	99	67.188	Jaculus_jaculus
ENSCPOG00000038986	RRP1	73	47.536	ENSKMAG00000005539	rrp1	51	47.826	Kryptolebias_marmoratus
ENSCPOG00000038986	RRP1	75	44.538	ENSLBEG00000021417	RRP1	89	44.944	Labrus_bergylta
ENSCPOG00000038986	RRP1	92	50.831	ENSLAFG00000000766	RRP1B	82	54.624	Loxodonta_africana
ENSCPOG00000038986	RRP1	82	67.282	ENSLAFG00000022901	RRP1	79	78.629	Loxodonta_africana
ENSCPOG00000038986	RRP1	98	67.974	ENSMFAG00000003202	RRP1	98	67.756	Macaca_fascicularis
ENSCPOG00000038986	RRP1	98	67.538	ENSMMUG00000012304	RRP1	98	67.320	Macaca_mulatta
ENSCPOG00000038986	RRP1	98	67.102	ENSMNEG00000031210	RRP1	98	66.885	Macaca_nemestrina
ENSCPOG00000038986	RRP1	90	63.294	ENSMLEG00000037797	RRP1	99	65.412	Mandrillus_leucophaeus
ENSCPOG00000038986	RRP1	99	57.174	ENSMAUG00000017653	Rrp1	99	56.071	Mesocricetus_auratus
ENSCPOG00000038986	RRP1	98	67.406	ENSMICG00000004700	RRP1	98	66.813	Microcebus_murinus
ENSCPOG00000038986	RRP1	99	57.172	ENSMOCG00000015687	Rrp1	99	58.182	Microtus_ochrogaster
ENSCPOG00000038986	RRP1	75	46.087	ENSMMOG00000019175	rrp1	86	45.640	Mola_mola
ENSCPOG00000038986	RRP1	76	60.907	ENSMODG00000021036	-	52	60.112	Monodelphis_domestica
ENSCPOG00000038986	RRP1	75	50.000	ENSMALG00000010310	rrp1	88	50.588	Monopterus_albus
ENSCPOG00000038986	RRP1	73	47.965	MGP_CAROLIEiJ_G0021376	Rrp1b	53	68.254	Mus_caroli
ENSCPOG00000038986	RRP1	98	59.200	MGP_CAROLIEiJ_G0015508	Rrp1	98	58.200	Mus_caroli
ENSCPOG00000038986	RRP1	73	49.851	ENSMUSG00000058392	Rrp1b	53	69.841	Mus_musculus
ENSCPOG00000038986	RRP1	98	57.400	ENSMUSG00000061032	Rrp1	98	57.800	Mus_musculus
ENSCPOG00000038986	RRP1	75	49.008	MGP_PahariEiJ_G0023695	Rrp1b	60	63.889	Mus_pahari
ENSCPOG00000038986	RRP1	99	58.929	MGP_PahariEiJ_G0030921	Rrp1	99	57.540	Mus_pahari
ENSCPOG00000038986	RRP1	98	57.400	MGP_SPRETEiJ_G0016321	Rrp1	98	57.600	Mus_spretus
ENSCPOG00000038986	RRP1	73	50.581	MGP_SPRETEiJ_G0022290	Rrp1b	53	69.841	Mus_spretus
ENSCPOG00000038986	RRP1	82	84.291	ENSMPUG00000009826	RRP1	80	86.800	Mustela_putorius_furo
ENSCPOG00000038986	RRP1	98	52.024	ENSNGAG00000022344	Rrp1	99	49.798	Nannospalax_galili
ENSCPOG00000038986	RRP1	98	65.795	ENSNLEG00000034734	RRP1	98	66.522	Nomascus_leucogenys
ENSCPOG00000038986	RRP1	80	66.017	ENSOPRG00000001319	RRP1	97	67.139	Ochotona_princeps
ENSCPOG00000038986	RRP1	73	59.281	ENSOANG00000006472	-	80	68.182	Ornithorhynchus_anatinus
ENSCPOG00000038986	RRP1	69	54.005	ENSOCUG00000022843	-	76	80.263	Oryctolagus_cuniculus
ENSCPOG00000038986	RRP1	87	43.596	ENSOMEG00000016910	-	51	42.243	Oryzias_melastigma
ENSCPOG00000038986	RRP1	86	68.215	ENSOGAG00000006105	RRP1	98	66.741	Otolemur_garnettii
ENSCPOG00000038986	RRP1	77	49.716	ENSOGAG00000009872	RRP1B	52	51.917	Otolemur_garnettii
ENSCPOG00000038986	RRP1	99	61.739	ENSOARG00000011434	RRP1	99	60.991	Ovis_aries
ENSCPOG00000038986	RRP1	98	65.870	ENSPPAG00000029050	RRP1	99	66.377	Pan_paniscus
ENSCPOG00000038986	RRP1	90	70.545	ENSPPRG00000010656	RRP1	99	67.406	Panthera_pardus
ENSCPOG00000038986	RRP1	74	47.076	ENSPTIG00000016894	RRP1B	51	49.675	Panthera_tigris_altaica
ENSCPOG00000038986	RRP1	83	59.536	ENSPTIG00000019473	RRP1	87	56.234	Panthera_tigris_altaica
ENSCPOG00000038986	RRP1	98	65.652	ENSPTRG00000013962	RRP1	99	66.377	Pan_troglodytes
ENSCPOG00000038986	RRP1	98	65.721	ENSPANG00000015097	RRP1	98	67.904	Papio_anubis
ENSCPOG00000038986	RRP1	75	39.884	ENSPMGG00000007512	-	84	40.173	Periophthalmus_magnuspinnatus
ENSCPOG00000038986	RRP1	93	65.919	ENSPEMG00000018421	Rrp1	99	65.646	Peromyscus_maniculatus_bairdii
ENSCPOG00000038986	RRP1	98	51.288	ENSPCIG00000015523	-	76	60.955	Phascolarctos_cinereus
ENSCPOG00000038986	RRP1	98	64.924	ENSPPYG00000011474	RRP1	98	65.577	Pongo_abelii
ENSCPOG00000038986	RRP1	79	53.371	ENSPCAG00000008370	-	94	54.416	Procavia_capensis
ENSCPOG00000038986	RRP1	98	66.302	ENSPCOG00000017706	RRP1	98	67.411	Propithecus_coquereli
ENSCPOG00000038986	RRP1	83	59.286	ENSPVAG00000009925	-	82	59.286	Pteropus_vampyrus
ENSCPOG00000038986	RRP1	100	63.974	ENSRNOG00000001203	Rrp1	99	65.208	Rattus_norvegicus
ENSCPOG00000038986	RRP1	98	65.011	ENSRBIG00000032082	RRP1	98	67.320	Rhinopithecus_bieti
ENSCPOG00000038986	RRP1	98	64.795	ENSRROG00000039799	RRP1	98	66.667	Rhinopithecus_roxellana
ENSCPOG00000038986	RRP1	88	73.232	ENSSBOG00000034689	RRP1	99	66.593	Saimiri_boliviensis_boliviensis
ENSCPOG00000038986	RRP1	66	60.261	ENSSHAG00000010304	-	92	60.261	Sarcophilus_harrisii
ENSCPOG00000038986	RRP1	68	44.411	ENSSFOG00015003932	-	51	44.713	Scleropages_formosus
ENSCPOG00000038986	RRP1	75	49.438	ENSSMAG00000016847	-	88	47.222	Scophthalmus_maximus
ENSCPOG00000038986	RRP1	83	49.081	ENSSSCG00000021698	RRP1B	62	46.699	Sus_scrofa
ENSCPOG00000038986	RRP1	81	71.958	ENSSSCG00000037061	RRP1	99	64.667	Sus_scrofa
ENSCPOG00000038986	RRP1	67	52.273	ENSTGUG00000005926	RRP1B	55	46.098	Taeniopygia_guttata
ENSCPOG00000038986	RRP1	75	48.844	ENSTRUG00000017592	rrp1	97	47.688	Takifugu_rubripes
ENSCPOG00000038986	RRP1	75	49.853	ENSTNIG00000005053	rrp1	54	50.147	Tetraodon_nigroviridis
ENSCPOG00000038986	RRP1	67	75.839	ENSTBEG00000001260	-	65	75.540	Tupaia_belangeri
ENSCPOG00000038986	RRP1	89	41.527	ENSTBEG00000000422	RRP1B	50	49.828	Tupaia_belangeri
ENSCPOG00000038986	RRP1	69	73.529	ENSTTRG00000011162	RRP1	80	73.529	Tursiops_truncatus
ENSCPOG00000038986	RRP1	72	61.027	ENSUAMG00000014189	-	98	58.982	Ursus_americanus
ENSCPOG00000038986	RRP1	70	47.853	ENSUMAG00000025510	RRP1B	57	49.662	Ursus_maritimus
ENSCPOG00000038986	RRP1	90	66.176	ENSUMAG00000025507	RRP1	99	63.265	Ursus_maritimus
ENSCPOG00000038986	RRP1	66	59.150	ENSVVUG00000024498	-	76	57.911	Vulpes_vulpes
ENSCPOG00000038986	RRP1	79	47.606	ENSXETG00000013683	rrp1b	50	50.309	Xenopus_tropicalis