EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000039068 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 52978 bases
Position: chrDS562922.1:9284991-9337968
Accession: 100727097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000029109	zf-C2H2_jaz	PF12171.8	2.2e-06	1	1
ENSCPOP00000029109	G-patch	PF01585.23	6.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000038156	GPATCH8-201	4293	XM_013148153	ENSCPOP00000029109	1430 (aa)	XP_013003607	A0A286XUF4

Gene Model

Click here to download ENSCPOG00000039068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000039068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000039068	GPATCH8	89	88.994	ENSAMEG00000018376	GPATCH8	99	76.872	Ailuropoda_melanoleuca
ENSCPOG00000039068	GPATCH8	50	56.161	ENSAPLG00000003095	GPATCH8	99	63.214	Anas_platyrhynchos
ENSCPOG00000039068	GPATCH8	89	88.593	ENSCJAG00000009807	GPATCH8	99	76.502	Callithrix_jacchus
ENSCPOG00000039068	GPATCH8	53	70.885	ENSCAFG00000014136	GPATCH8	99	77.540	Canis_familiaris
ENSCPOG00000039068	GPATCH8	53	70.885	ENSCAFG00020009830	GPATCH8	99	77.540	Canis_lupus_dingo
ENSCPOG00000039068	GPATCH8	100	99.231	ENSCAPG00000004450	GPATCH8	98	99.231	Cavia_aperea
ENSCPOG00000039068	GPATCH8	89	89.734	ENSCCAG00000030686	GPATCH8	100	76.896	Cebus_capucinus
ENSCPOG00000039068	GPATCH8	89	89.354	ENSCATG00000028156	GPATCH8	100	75.972	Cercocebus_atys
ENSCPOG00000039068	GPATCH8	100	62.209	ENSCPBG00000008955	GPATCH8	99	64.229	Chrysemys_picta_bellii
ENSCPOG00000039068	GPATCH8	100	75.304	ENSCGRG00001020210	Gpatch8	99	76.146	Cricetulus_griseus_chok1gshd
ENSCPOG00000039068	GPATCH8	100	75.304	ENSCGRG00000017090	Gpatch8	99	76.146	Cricetulus_griseus_crigri
ENSCPOG00000039068	GPATCH8	100	76.328	ENSDNOG00000005102	GPATCH8	99	76.463	Dasypus_novemcinctus
ENSCPOG00000039068	GPATCH8	100	75.252	ENSDORG00000027664	Gpatch8	99	76.825	Dipodomys_ordii
ENSCPOG00000039068	GPATCH8	53	65.136	ENSETEG00000001325	GPATCH8	99	72.849	Echinops_telfairi
ENSCPOG00000039068	GPATCH8	67	46.050	ENSEBUG00000005749	gpatch8	70	45.973	Eptatretus_burgeri
ENSCPOG00000039068	GPATCH8	89	87.856	ENSFCAG00000043334	GPATCH8	99	75.703	Felis_catus
ENSCPOG00000039068	GPATCH8	50	60.558	ENSFALG00000009554	GPATCH8	99	62.960	Ficedula_albicollis
ENSCPOG00000039068	GPATCH8	100	60.816	ENSGALG00000041556	GPATCH8	98	61.889	Gallus_gallus
ENSCPOG00000039068	GPATCH8	100	62.048	ENSGAGG00000008358	GPATCH8	99	64.037	Gopherus_agassizii
ENSCPOG00000039068	GPATCH8	89	88.973	ENSGGOG00000013860	GPATCH8	99	75.518	Gorilla_gorilla
ENSCPOG00000039068	GPATCH8	100	82.060	ENSHGLG00000017687	GPATCH8	99	81.241	Heterocephalus_glaber_female
ENSCPOG00000039068	GPATCH8	77	81.788	ENSHGLG00100010738	GPATCH8	99	81.788	Heterocephalus_glaber_male
ENSCPOG00000039068	GPATCH8	100	75.218	ENSJJAG00000017797	Gpatch8	99	75.920	Jaculus_jaculus
ENSCPOG00000039068	GPATCH8	53	69.738	ENSMAUG00000021770	Gpatch8	99	76.793	Mesocricetus_auratus
ENSCPOG00000039068	GPATCH8	100	75.687	ENSMOCG00000001658	Gpatch8	99	75.636	Microtus_ochrogaster
ENSCPOG00000039068	GPATCH8	100	71.429	ENSMODG00000011442	GPATCH8	99	71.933	Monodelphis_domestica
ENSCPOG00000039068	GPATCH8	53	68.137	MGP_CAROLIEiJ_G0017255	Gpatch8	99	76.056	Mus_caroli
ENSCPOG00000039068	GPATCH8	100	74.799	ENSMUSG00000034621	Gpatch8	99	75.871	Mus_musculus
ENSCPOG00000039068	GPATCH8	53	68.182	MGP_SPRETEiJ_G0018098	Gpatch8	99	76.088	Mus_spretus
ENSCPOG00000039068	GPATCH8	93	92.568	ENSMLUG00000013840	GPATCH8	98	93.151	Myotis_lucifugus
ENSCPOG00000039068	GPATCH8	100	75.436	ENSNGAG00000021860	Gpatch8	99	76.711	Nannospalax_galili
ENSCPOG00000039068	GPATCH8	75	68.657	ENSMEUG00000011799	GPATCH8	97	69.008	Notamacropus_eugenii
ENSCPOG00000039068	GPATCH8	100	67.447	ENSOPRG00000008816	GPATCH8	99	69.030	Ochotona_princeps
ENSCPOG00000039068	GPATCH8	100	75.335	ENSOCUG00000003291	GPATCH8	99	75.636	Oryctolagus_cuniculus
ENSCPOG00000039068	GPATCH8	99	75.984	ENSOGAG00000033643	GPATCH8	100	76.610	Otolemur_garnettii
ENSCPOG00000039068	GPATCH8	100	75.352	ENSPPAG00000040523	GPATCH8	99	77.458	Pan_paniscus
ENSCPOG00000039068	GPATCH8	89	88.805	ENSPPRG00000023310	GPATCH8	99	76.502	Panthera_pardus
ENSCPOG00000039068	GPATCH8	89	88.425	ENSPTIG00000020001	GPATCH8	99	76.104	Panthera_tigris_altaica
ENSCPOG00000039068	GPATCH8	54	58.180	ENSPSIG00000006255	GPATCH8	99	61.070	Pelodiscus_sinensis
ENSCPOG00000039068	GPATCH8	96	71.111	ENSPCIG00000019927	GPATCH8	100	71.319	Phascolarctos_cinereus
ENSCPOG00000039068	GPATCH8	52	68.308	ENSPCOG00000019209	GPATCH8	99	75.916	Propithecus_coquereli
ENSCPOG00000039068	GPATCH8	100	74.484	ENSPVAG00000003155	GPATCH8	99	76.514	Pteropus_vampyrus
ENSCPOG00000039068	GPATCH8	89	89.544	ENSRBIG00000033713	GPATCH8	100	76.548	Rhinopithecus_bieti
ENSCPOG00000039068	GPATCH8	89	89.544	ENSRROG00000029623	GPATCH8	99	77.458	Rhinopithecus_roxellana
ENSCPOG00000039068	GPATCH8	89	89.734	ENSSBOG00000023544	GPATCH8	100	76.475	Saimiri_boliviensis_boliviensis
ENSCPOG00000039068	GPATCH8	100	72.363	ENSSHAG00000016140	GPATCH8	99	72.630	Sarcophilus_harrisii
ENSCPOG00000039068	GPATCH8	51	69.093	ENSSARG00000007516	GPATCH8	99	74.950	Sorex_araneus
ENSCPOG00000039068	GPATCH8	53	69.770	ENSSSCG00000017357	ITGA2B	100	75.881	Sus_scrofa
ENSCPOG00000039068	GPATCH8	80	92.647	ENSTBEG00000009486	GPATCH8	89	91.693	Tupaia_belangeri
ENSCPOG00000039068	GPATCH8	88	88.039	ENSTTRG00000010527	GPATCH8	99	74.816	Tursiops_truncatus
ENSCPOG00000039068	GPATCH8	96	74.948	ENSUMAG00000013891	GPATCH8	100	74.180	Ursus_maritimus
ENSCPOG00000039068	GPATCH8	90	73.817	ENSVPAG00000006937	GPATCH8	99	74.058	Vicugna_pacos
ENSCPOG00000039068	GPATCH8	53	70.516	ENSVVUG00000017996	GPATCH8	99	77.273	Vulpes_vulpes