EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000039255 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: single-stranded DNA cytosine deaminase-like
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 6159 bases
Position: chrDS562883.1:2361987-2368145
Accession: 100732386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017716	APOBEC_N	PF08210.11	2.7e-63	1	1
ENSCPOP00000017716	APOBEC_C	PF05240.14	9.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000021666	-	1252	XM_013152964	ENSCPOP00000017716	193 (aa)	XP_013008418	H0W417

Gene Model

Click here to download ENSCPOG00000039255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000039255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000039255	-	91	98.864	ENSCPOG00000037838	-	97	98.864
ENSCPOG00000039255	-	100	36.932	ENSCPOG00000009257	-	88	36.932
ENSCPOG00000039255	-	100	98.446	ENSCPOG00000030440	-	100	98.446
ENSCPOG00000039255	-	88	32.370	ENSCPOG00000036103	APOBEC2	75	35.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000039255	-	100	93.782	ENSG00000111732	AICDA	98	93.782	Homo_sapiens
ENSCPOG00000039255	-	98	59.686	ENSAPOG00000023552	aicda	99	59.686	Acanthochromis_polyacanthus
ENSCPOG00000039255	-	100	94.819	ENSAMEG00000007082	AICDA	97	94.819	Ailuropoda_melanoleuca
ENSCPOG00000039255	-	100	61.538	ENSACIG00000012301	aicda	99	61.538	Amphilophus_citrinellus
ENSCPOG00000039255	-	100	59.278	ENSAOCG00000000482	aicda	99	57.561	Amphiprion_ocellaris
ENSCPOG00000039255	-	100	59.278	ENSAPEG00000009755	aicda	97	59.278	Amphiprion_percula
ENSCPOG00000039255	-	100	61.026	ENSATEG00000022035	aicda	95	61.026	Anabas_testudineus
ENSCPOG00000039255	-	100	89.119	ENSAPLG00000013954	AICDA	96	89.119	Anas_platyrhynchos
ENSCPOG00000039255	-	100	85.492	ENSACAG00000017441	AICDA	97	85.492	Anolis_carolinensis
ENSCPOG00000039255	-	100	93.782	ENSANAG00000022438	AICDA	97	93.782	Aotus_nancymaae
ENSCPOG00000039255	-	100	62.051	ENSACLG00000022679	aicda	99	62.051	Astatotilapia_calliptera
ENSCPOG00000039255	-	71	58.108	ENSAMXG00000037242	aicda	61	58.108	Astyanax_mexicanus
ENSCPOG00000039255	-	100	92.268	ENSBTAG00000018849	AICDA	97	92.268	Bos_taurus
ENSCPOG00000039255	-	100	93.782	ENSCJAG00000018856	AICDA	97	93.782	Callithrix_jacchus
ENSCPOG00000039255	-	100	94.301	ENSCAFG00000013897	AICDA	83	94.301	Canis_familiaris
ENSCPOG00000039255	-	100	94.301	ENSCAFG00020003515	AICDA	95	94.301	Canis_lupus_dingo
ENSCPOG00000039255	-	100	90.722	ENSCHIG00000012409	AICDA	97	90.722	Capra_hircus
ENSCPOG00000039255	-	100	90.674	ENSTSYG00000011304	AICDA	97	90.674	Carlito_syrichta
ENSCPOG00000039255	-	100	75.130	ENSCCAG00000030398	AICDA	97	75.130	Cebus_capucinus
ENSCPOG00000039255	-	100	94.819	ENSCATG00000039986	AICDA	97	94.819	Cercocebus_atys
ENSCPOG00000039255	-	100	94.819	ENSCSAG00000009663	AICDA	98	94.819	Chlorocebus_sabaeus
ENSCPOG00000039255	-	100	71.649	ENSCHOG00000010248	AICDA	97	71.649	Choloepus_hoffmanni
ENSCPOG00000039255	-	100	88.601	ENSCPBG00000014337	AICDA	97	88.601	Chrysemys_picta_bellii
ENSCPOG00000039255	-	100	94.819	ENSCANG00000035131	AICDA	97	94.819	Colobus_angolensis_palliatus
ENSCPOG00000039255	-	100	92.228	ENSCGRG00001009654	Aicda	97	92.228	Cricetulus_griseus_chok1gshd
ENSCPOG00000039255	-	100	92.228	ENSCGRG00000013829	Aicda	97	92.228	Cricetulus_griseus_crigri
ENSCPOG00000039255	-	100	58.537	ENSCSEG00000018589	aicda	96	58.537	Cynoglossus_semilaevis
ENSCPOG00000039255	-	100	60.825	ENSCVAG00000001218	aicda	96	60.825	Cyprinodon_variegatus
ENSCPOG00000039255	-	100	62.871	ENSDARG00000015734	aicda	96	62.871	Danio_rerio
ENSCPOG00000039255	-	91	89.773	ENSETEG00000014702	AICDA	98	89.773	Echinops_telfairi
ENSCPOG00000039255	-	100	93.264	ENSEASG00005015947	AICDA	97	93.264	Equus_asinus_asinus
ENSCPOG00000039255	-	100	93.782	ENSECAG00000018578	AICDA	97	93.782	Equus_caballus
ENSCPOG00000039255	-	91	90.909	ENSEEUG00000013899	AICDA	98	90.909	Erinaceus_europaeus
ENSCPOG00000039255	-	100	57.561	ENSELUG00000016293	aicda	96	57.561	Esox_lucius
ENSCPOG00000039255	-	100	94.819	ENSFCAG00000006052	AICDA	83	94.819	Felis_catus
ENSCPOG00000039255	-	100	82.902	ENSFALG00000007261	AICDA	98	82.902	Ficedula_albicollis
ENSCPOG00000039255	-	91	84.091	ENSFDAG00000011141	AICDA	97	84.091	Fukomys_damarensis
ENSCPOG00000039255	-	100	58.049	ENSFHEG00000015733	aicda	99	58.049	Fundulus_heteroclitus
ENSCPOG00000039255	-	100	59.709	ENSGMOG00000004114	aicda	95	59.709	Gadus_morhua
ENSCPOG00000039255	-	100	88.601	ENSGALG00000014280	AICDA	97	88.601	Gallus_gallus
ENSCPOG00000039255	-	100	56.098	ENSGAFG00000013758	aicda	94	56.098	Gambusia_affinis
ENSCPOG00000039255	-	100	56.098	ENSGACG00000010521	aicda	96	56.098	Gasterosteus_aculeatus
ENSCPOG00000039255	-	100	88.601	ENSGAGG00000011838	-	97	88.601	Gopherus_agassizii
ENSCPOG00000039255	-	100	88.601	ENSGAGG00000011839	-	97	88.601	Gopherus_agassizii
ENSCPOG00000039255	-	100	93.782	ENSGGOG00000003338	AICDA	97	93.782	Gorilla_gorilla
ENSCPOG00000039255	-	100	62.051	ENSHBUG00000014333	aicda	99	62.051	Haplochromis_burtoni
ENSCPOG00000039255	-	100	93.782	ENSHGLG00000001443	AICDA	97	93.782	Heterocephalus_glaber_female
ENSCPOG00000039255	-	100	93.264	ENSHGLG00100001381	AICDA	97	93.264	Heterocephalus_glaber_male
ENSCPOG00000039255	-	98	59.896	ENSHCOG00000018886	aicda	97	59.896	Hippocampus_comes
ENSCPOG00000039255	-	100	58.333	ENSIPUG00000007380	aicda	96	58.333	Ictalurus_punctatus
ENSCPOG00000039255	-	100	93.782	ENSSTOG00000010972	AICDA	97	93.782	Ictidomys_tridecemlineatus
ENSCPOG00000039255	-	91	95.455	ENSJJAG00000000908	Aicda	97	95.455	Jaculus_jaculus
ENSCPOG00000039255	-	100	60.309	ENSKMAG00000006359	aicda	97	60.309	Kryptolebias_marmoratus
ENSCPOG00000039255	-	100	57.143	ENSLBEG00000015351	aicda	98	58.049	Labrus_bergylta
ENSCPOG00000039255	-	70	70.370	ENSLACG00000009320	aicda	91	70.370	Latimeria_chalumnae
ENSCPOG00000039255	-	65	66.667	ENSLOCG00000008158	aicda	98	66.667	Lepisosteus_oculatus
ENSCPOG00000039255	-	99	92.708	ENSLAFG00000000721	AICDA	98	92.708	Loxodonta_africana
ENSCPOG00000039255	-	100	94.819	ENSMFAG00000037834	AICDA	97	94.819	Macaca_fascicularis
ENSCPOG00000039255	-	100	94.819	ENSMMUG00000019134	AICDA	97	94.819	Macaca_mulatta
ENSCPOG00000039255	-	100	94.819	ENSMNEG00000043421	AICDA	97	94.819	Macaca_nemestrina
ENSCPOG00000039255	-	100	94.819	ENSMLEG00000040938	AICDA	97	94.819	Mandrillus_leucophaeus
ENSCPOG00000039255	-	76	96.599	ENSMLEG00000039759	-	99	86.982	Mandrillus_leucophaeus
ENSCPOG00000039255	-	100	58.537	ENSMAMG00000020032	aicda	96	58.537	Mastacembelus_armatus
ENSCPOG00000039255	-	100	62.051	ENSMZEG00005016678	aicda	99	62.051	Maylandia_zebra
ENSCPOG00000039255	-	100	88.601	ENSMGAG00000013942	AICDA	98	88.601	Meleagris_gallopavo
ENSCPOG00000039255	-	100	92.228	ENSMAUG00000012229	Aicda	97	92.228	Mesocricetus_auratus
ENSCPOG00000039255	-	100	93.299	ENSMICG00000011695	AICDA	97	93.299	Microcebus_murinus
ENSCPOG00000039255	-	100	92.228	ENSMOCG00000022460	Aicda	97	92.228	Microtus_ochrogaster
ENSCPOG00000039255	-	100	58.049	ENSMMOG00000016707	aicda	96	58.049	Mola_mola
ENSCPOG00000039255	-	100	89.119	ENSMODG00000018002	AICDA	100	89.119	Monodelphis_domestica
ENSCPOG00000039255	-	100	57.561	ENSMALG00000010442	aicda	96	57.561	Monopterus_albus
ENSCPOG00000039255	-	71	93.431	MGP_CAROLIEiJ_G0028824	-	96	93.431	Mus_caroli
ENSCPOG00000039255	-	100	92.746	ENSMUSG00000040627	Aicda	100	91.667	Mus_musculus
ENSCPOG00000039255	-	100	92.746	MGP_PahariEiJ_G0022579	Aicda	100	91.667	Mus_pahari
ENSCPOG00000039255	-	100	92.746	MGP_SPRETEiJ_G0029856	Aicda	100	91.667	Mus_spretus
ENSCPOG00000039255	-	100	94.819	ENSMPUG00000017533	AICDA	92	94.819	Mustela_putorius_furo
ENSCPOG00000039255	-	100	93.782	ENSMLUG00000007881	AICDA	97	93.782	Myotis_lucifugus
ENSCPOG00000039255	-	100	93.782	ENSNGAG00000023430	Aicda	97	93.782	Nannospalax_galili
ENSCPOG00000039255	-	97	62.105	ENSNBRG00000000070	aicda	96	62.105	Neolamprologus_brichardi
ENSCPOG00000039255	-	100	93.264	ENSNLEG00000001917	AICDA	97	93.264	Nomascus_leucogenys
ENSCPOG00000039255	-	100	88.083	ENSMEUG00000006570	AICDA	97	88.083	Notamacropus_eugenii
ENSCPOG00000039255	-	100	90.674	ENSOPRG00000013486	AICDA	99	90.674	Ochotona_princeps
ENSCPOG00000039255	-	100	92.746	ENSODEG00000001235	AICDA	97	92.746	Octodon_degus
ENSCPOG00000039255	-	100	57.561	ENSONIG00000012823	aicda	96	57.561	Oreochromis_niloticus
ENSCPOG00000039255	-	100	92.228	ENSOANG00000007150	AICDA	97	92.228	Ornithorhynchus_anatinus
ENSCPOG00000039255	-	100	92.228	ENSOCUG00000023739	AICDA	100	92.228	Oryctolagus_cuniculus
ENSCPOG00000039255	-	100	60.000	ENSORLG00000011705	aicda	97	60.000	Oryzias_latipes
ENSCPOG00000039255	-	100	60.000	ENSORLG00020006547	aicda	97	60.000	Oryzias_latipes_hni
ENSCPOG00000039255	-	100	60.000	ENSORLG00015012504	aicda	97	60.000	Oryzias_latipes_hsok
ENSCPOG00000039255	-	100	60.000	ENSOMEG00000011880	aicda	95	60.000	Oryzias_melastigma
ENSCPOG00000039255	-	100	94.301	ENSOGAG00000026770	AICDA	97	94.301	Otolemur_garnettii
ENSCPOG00000039255	-	100	89.796	ENSOARG00000001982	AICDA	98	89.796	Ovis_aries
ENSCPOG00000039255	-	100	93.782	ENSPPAG00000038169	AICDA	97	93.782	Pan_paniscus
ENSCPOG00000039255	-	100	94.819	ENSPPRG00000012985	AICDA	97	94.819	Panthera_pardus
ENSCPOG00000039255	-	100	94.819	ENSPTIG00000020074	AICDA	97	94.819	Panthera_tigris_altaica
ENSCPOG00000039255	-	100	93.782	ENSPTRG00000004640	AICDA	97	93.782	Pan_troglodytes
ENSCPOG00000039255	-	100	94.819	ENSPANG00000017883	AICDA	97	94.819	Papio_anubis
ENSCPOG00000039255	-	94	62.105	ENSPKIG00000001499	aicda	100	62.105	Paramormyrops_kingsleyae
ENSCPOG00000039255	-	100	88.083	ENSPSIG00000013283	AICDA	98	88.083	Pelodiscus_sinensis
ENSCPOG00000039255	-	97	60.101	ENSPMGG00000014598	aicda	93	60.302	Periophthalmus_magnuspinnatus
ENSCPOG00000039255	-	100	91.710	ENSPEMG00000008352	Aicda	97	91.710	Peromyscus_maniculatus_bairdii
ENSCPOG00000039255	-	100	89.119	ENSPCIG00000023974	AICDA	97	89.119	Phascolarctos_cinereus
ENSCPOG00000039255	-	93	56.522	ENSPFOG00000011197	aicda	97	56.522	Poecilia_formosa
ENSCPOG00000039255	-	100	57.073	ENSPLAG00000014098	aicda	98	57.073	Poecilia_latipinna
ENSCPOG00000039255	-	100	57.073	ENSPMEG00000024203	aicda	96	57.073	Poecilia_mexicana
ENSCPOG00000039255	-	100	57.073	ENSPREG00000009041	aicda	96	57.073	Poecilia_reticulata
ENSCPOG00000039255	-	100	94.301	ENSPPYG00000004242	AICDA	98	94.301	Pongo_abelii
ENSCPOG00000039255	-	53	92.727	ENSPCAG00000009544	-	52	92.727	Procavia_capensis
ENSCPOG00000039255	-	69	92.537	ENSPCOG00000003380	-	80	92.537	Propithecus_coquereli
ENSCPOG00000039255	-	100	93.782	ENSPVAG00000012185	AICDA	97	93.782	Pteropus_vampyrus
ENSCPOG00000039255	-	100	62.051	ENSPNYG00000000988	aicda	99	62.051	Pundamilia_nyererei
ENSCPOG00000039255	-	100	62.745	ENSPNAG00000019237	aicda	98	62.745	Pygocentrus_nattereri
ENSCPOG00000039255	-	100	92.228	ENSRNOG00000015478	Aicda	97	92.228	Rattus_norvegicus
ENSCPOG00000039255	-	100	94.819	ENSRBIG00000026659	AICDA	97	94.819	Rhinopithecus_bieti
ENSCPOG00000039255	-	100	94.819	ENSRROG00000032866	AICDA	97	94.819	Rhinopithecus_roxellana
ENSCPOG00000039255	-	100	75.648	ENSSBOG00000035758	AICDA	97	75.648	Saimiri_boliviensis_boliviensis
ENSCPOG00000039255	-	100	88.083	ENSSHAG00000008694	AICDA	97	88.083	Sarcophilus_harrisii
ENSCPOG00000039255	-	100	60.891	ENSSFOG00015001695	aicda	96	60.891	Scleropages_formosus
ENSCPOG00000039255	-	98	58.706	ENSSMAG00000012339	aicda	86	58.706	Scophthalmus_maximus
ENSCPOG00000039255	-	100	60.309	ENSSDUG00000009894	aicda	95	60.309	Seriola_dumerili
ENSCPOG00000039255	-	100	60.825	ENSSLDG00000023022	aicda	94	60.825	Seriola_lalandi_dorsalis
ENSCPOG00000039255	-	100	82.902	ENSSPUG00000009022	AICDA	98	82.902	Sphenodon_punctatus
ENSCPOG00000039255	-	100	56.585	ENSSPAG00000021499	aicda	64	56.585	Stegastes_partitus
ENSCPOG00000039255	-	100	91.710	ENSSSCG00000000667	AICDA	97	91.710	Sus_scrofa
ENSCPOG00000039255	-	100	81.865	ENSTGUG00000013115	AICDA	98	81.865	Taeniopygia_guttata
ENSCPOG00000039255	-	99	55.882	ENSTRUG00000007079	aicda	95	55.882	Takifugu_rubripes
ENSCPOG00000039255	-	100	56.039	ENSTNIG00000008118	aicda	97	56.039	Tetraodon_nigroviridis
ENSCPOG00000039255	-	100	62.694	ENSTBEG00000002559	AICDA	98	62.694	Tupaia_belangeri
ENSCPOG00000039255	-	91	93.220	ENSTTRG00000000703	AICDA	97	93.220	Tursiops_truncatus
ENSCPOG00000039255	-	98	95.767	ENSUAMG00000011642	AICDA	96	95.767	Ursus_americanus
ENSCPOG00000039255	-	98	95.767	ENSUMAG00000016540	AICDA	96	95.767	Ursus_maritimus
ENSCPOG00000039255	-	76	96.599	ENSVPAG00000003950	AICDA	100	96.599	Vicugna_pacos
ENSCPOG00000039255	-	100	70.103	ENSXETG00000023905	aicda	97	70.103	Xenopus_tropicalis
ENSCPOG00000039255	-	100	56.701	ENSXCOG00000019386	aicda	89	56.701	Xiphophorus_couchianus
ENSCPOG00000039255	-	100	58.247	ENSXMAG00000011889	aicda	90	58.247	Xiphophorus_maculatus