EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000039545 (Gene tree)
Gene ID: 100726350
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 10769 bases
Position: chrDS562857.1:32908727-32919495
Accession: 100726350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030912	PRP38	PF03371.15	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000037196	-	4619	XM_003479189	ENSCPOP00000030912	543 (aa)	XP_003479237	A0A286XZD5

Gene Model

Click here to download ENSCPOG00000039545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000039545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000039545	-	81	64.642	ENSATEG00000014482	-	59	84.000	Anabas_testudineus
ENSCPOG00000039545	-	100	94.312	ENSBTAG00000047874	PRPF38B	100	94.495	Bos_taurus
ENSCPOG00000039545	-	100	79.380	ENSCAFG00020010992	-	100	80.657	Canis_lupus_dingo
ENSCPOG00000039545	-	100	94.312	ENSCHIG00000024357	-	100	94.495	Capra_hircus
ENSCPOG00000039545	-	79	98.840	ENSCAPG00000009606	-	100	98.840	Cavia_aperea
ENSCPOG00000039545	-	100	97.628	ENSCLAG00000005801	-	100	97.628	Chinchilla_lanigera
ENSCPOG00000039545	-	64	83.853	ENSCHOG00000008972	-	94	80.896	Choloepus_hoffmanni
ENSCPOG00000039545	-	100	85.246	ENSCPBG00000028299	-	100	85.505	Chrysemys_picta_bellii
ENSCPOG00000039545	-	50	57.509	ENSCSAVG00000009443	-	70	74.737	Ciona_savignyi
ENSCPOG00000039545	-	91	60.479	ENSCSEG00000015030	-	59	81.752	Cynoglossus_semilaevis
ENSCPOG00000039545	-	82	91.353	ENSETEG00000014690	-	91	92.365	Echinops_telfairi
ENSCPOG00000039545	-	57	71.061	ENSELUG00000010390	-	50	80.669	Esox_lucius
ENSCPOG00000039545	-	83	86.755	ENSFALG00000002673	-	88	87.638	Ficedula_albicollis
ENSCPOG00000039545	-	94	57.386	ENSGMOG00000012080	-	58	81.685	Gadus_morhua
ENSCPOG00000039545	-	100	86.051	ENSGALG00000001972	-	100	85.246	Gallus_gallus
ENSCPOG00000039545	-	82	63.011	ENSGAFG00000008943	-	59	84.783	Gambusia_affinis
ENSCPOG00000039545	-	100	85.428	ENSGAGG00000001563	-	100	85.688	Gopherus_agassizii
ENSCPOG00000039545	-	100	97.263	ENSHGLG00000016583	PRPF38B	100	97.263	Heterocephalus_glaber_female
ENSCPOG00000039545	-	100	97.080	ENSHGLG00100015525	-	100	97.080	Heterocephalus_glaber_male
ENSCPOG00000039545	-	80	61.388	ENSKMAG00000005540	-	79	68.817	Kryptolebias_marmoratus
ENSCPOG00000039545	-	97	73.188	ENSLACG00000015511	-	93	74.031	Latimeria_chalumnae
ENSCPOG00000039545	-	100	82.721	ENSMOCG00000020285	-	100	90.074	Microtus_ochrogaster
ENSCPOG00000039545	-	83	61.088	ENSMMOG00000011639	-	59	82.909	Mola_mola
ENSCPOG00000039545	-	60	95.770	ENSMODG00000002350	-	100	93.236	Monodelphis_domestica
ENSCPOG00000039545	-	82	63.966	ENSMALG00000019479	-	59	84.364	Monopterus_albus
ENSCPOG00000039545	-	71	87.879	ENSMEUG00000004859	-	85	86.641	Notamacropus_eugenii
ENSCPOG00000039545	-	80	93.939	ENSOPRG00000013543	-	81	95.455	Ochotona_princeps
ENSCPOG00000039545	-	82	65.733	ENSONIG00000010129	-	59	84.364	Oreochromis_niloticus
ENSCPOG00000039545	-	90	83.529	ENSOANG00000007343	-	99	90.854	Ornithorhynchus_anatinus
ENSCPOG00000039545	-	82	64.147	ENSORLG00000015621	-	87	92.763	Oryzias_latipes
ENSCPOG00000039545	-	83	63.675	ENSORLG00020016276	-	87	92.763	Oryzias_latipes_hni
ENSCPOG00000039545	-	81	65.132	ENSORLG00015016270	-	71	94.558	Oryzias_latipes_hsok
ENSCPOG00000039545	-	83	64.316	ENSOMEG00000022050	-	89	92.208	Oryzias_melastigma
ENSCPOG00000039545	-	100	93.978	ENSOGAG00000027048	-	100	94.526	Otolemur_garnettii
ENSCPOG00000039545	-	100	92.477	ENSOARG00000018899	-	100	92.294	Ovis_aries
ENSCPOG00000039545	-	97	62.942	ENSPKIG00000004815	-	57	82.295	Paramormyrops_kingsleyae
ENSCPOG00000039545	-	100	84.517	ENSPSIG00000016569	-	100	85.138	Pelodiscus_sinensis
ENSCPOG00000039545	-	82	63.656	ENSPFOG00000004025	-	78	95.238	Poecilia_formosa
ENSCPOG00000039545	-	82	63.656	ENSPLAG00000019842	-	59	85.145	Poecilia_latipinna
ENSCPOG00000039545	-	83	62.924	ENSPMEG00000004807	-	57	85.145	Poecilia_mexicana
ENSCPOG00000039545	-	82	62.366	ENSPREG00000015599	-	80	95.238	Poecilia_reticulata
ENSCPOG00000039545	-	51	84.643	ENSPNAG00000017484	-	93	63.095	Pygocentrus_nattereri
ENSCPOG00000039545	-	100	90.676	ENSRNOG00000020438	Prpf38b	100	89.762	Rattus_norvegicus
ENSCPOG00000039545	-	94	62.186	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSCPOG00000039545	-	82	63.771	ENSSLDG00000023487	-	82	92.763	Seriola_lalandi_dorsalis
ENSCPOG00000039545	-	100	83.394	ENSSPUG00000017742	-	100	81.502	Sphenodon_punctatus
ENSCPOG00000039545	-	71	69.643	ENSTRUG00000011765	-	59	83.333	Takifugu_rubripes
ENSCPOG00000039545	-	51	80.565	ENSTNIG00000015299	-	68	83.094	Tetraodon_nigroviridis
ENSCPOG00000039545	-	93	90.215	ENSTBEG00000007504	-	100	90.607	Tupaia_belangeri
ENSCPOG00000039545	-	100	95.229	ENSTTRG00000006479	-	100	95.413	Tursiops_truncatus
ENSCPOG00000039545	-	99	86.900	ENSVPAG00000005541	-	99	87.454	Vicugna_pacos
ENSCPOG00000039545	-	94	74.855	ENSXETG00000005260	prpf38b	100	62.936	Xenopus_tropicalis
ENSCPOG00000039545	-	82	62.395	ENSXCOG00000008329	-	59	84.783	Xiphophorus_couchianus
ENSCPOG00000039545	-	82	62.395	ENSXMAG00000023831	-	59	84.783	Xiphophorus_maculatus