EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000040168 (Gene tree)
Gene ID: 100735229
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 29166 bases
Position: chrDS563036.1:373508-402673
Accession: 100735229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000023051	MRP-S27	PF10037.9	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000040581	PTCD2-201	4452	XM_003461605	ENSCPOP00000023051	383 (aa)	XP_003461653	A0A286XC84

Gene Model

Click here to download ENSCPOG00000040168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000040168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000040168	PTCD2	100	74.935	ENSG00000049883	PTCD2	100	77.340	Homo_sapiens
ENSCPOG00000040168	PTCD2	97	44.744	ENSAPOG00000020682	ptcd2	93	44.744	Acanthochromis_polyacanthus
ENSCPOG00000040168	PTCD2	100	70.757	ENSAMEG00000007194	PTCD2	99	70.757	Ailuropoda_melanoleuca
ENSCPOG00000040168	PTCD2	90	41.261	ENSACIG00000002053	ptcd2	100	41.261	Amphilophus_citrinellus
ENSCPOG00000040168	PTCD2	97	44.474	ENSAOCG00000006616	ptcd2	92	44.474	Amphiprion_ocellaris
ENSCPOG00000040168	PTCD2	97	43.935	ENSAPEG00000022926	ptcd2	92	43.935	Amphiprion_percula
ENSCPOG00000040168	PTCD2	99	54.593	ENSACAG00000009747	PTCD2	97	54.593	Anolis_carolinensis
ENSCPOG00000040168	PTCD2	100	76.501	ENSANAG00000029353	PTCD2	99	76.501	Aotus_nancymaae
ENSCPOG00000040168	PTCD2	94	43.490	ENSACLG00000027742	ptcd2	91	43.490	Astatotilapia_calliptera
ENSCPOG00000040168	PTCD2	85	42.331	ENSAMXG00000029404	ptcd2	87	42.331	Astyanax_mexicanus
ENSCPOG00000040168	PTCD2	100	74.740	ENSBTAG00000014675	PTCD2	100	74.740	Bos_taurus
ENSCPOG00000040168	PTCD2	100	74.413	ENSCJAG00000016364	PTCD2	99	74.413	Callithrix_jacchus
ENSCPOG00000040168	PTCD2	100	71.018	ENSCAFG00000007982	PTCD2	90	71.018	Canis_familiaris
ENSCPOG00000040168	PTCD2	90	73.699	ENSCAFG00020019147	PTCD2	97	73.699	Canis_lupus_dingo
ENSCPOG00000040168	PTCD2	100	75.781	ENSCHIG00000017118	PTCD2	100	75.781	Capra_hircus
ENSCPOG00000040168	PTCD2	100	74.674	ENSCCAG00000029389	-	99	74.674	Cebus_capucinus
ENSCPOG00000040168	PTCD2	83	69.592	ENSCCAG00000021996	-	98	69.592	Cebus_capucinus
ENSCPOG00000040168	PTCD2	100	75.196	ENSCATG00000019069	PTCD2	100	75.196	Cercocebus_atys
ENSCPOG00000040168	PTCD2	100	81.201	ENSCLAG00000000072	PTCD2	100	81.201	Chinchilla_lanigera
ENSCPOG00000040168	PTCD2	100	76.762	ENSCSAG00000015623	PTCD2	100	76.762	Chlorocebus_sabaeus
ENSCPOG00000040168	PTCD2	90	56.322	ENSCHOG00000010634	PTCD2	100	56.322	Choloepus_hoffmanni
ENSCPOG00000040168	PTCD2	100	51.436	ENSCPBG00000000216	PTCD2	98	51.436	Chrysemys_picta_bellii
ENSCPOG00000040168	PTCD2	100	75.718	ENSCANG00000035636	PTCD2	99	75.718	Colobus_angolensis_palliatus
ENSCPOG00000040168	PTCD2	100	71.279	ENSCGRG00001015289	Ptcd2	84	71.279	Cricetulus_griseus_chok1gshd
ENSCPOG00000040168	PTCD2	100	71.279	ENSCGRG00000006193	Ptcd2	84	71.279	Cricetulus_griseus_crigri
ENSCPOG00000040168	PTCD2	98	43.583	ENSCVAG00000001285	ptcd2	92	43.583	Cyprinodon_variegatus
ENSCPOG00000040168	PTCD2	93	44.382	ENSDARG00000035391	ptcd2	93	44.382	Danio_rerio
ENSCPOG00000040168	PTCD2	100	70.235	ENSDNOG00000008719	PTCD2	100	70.235	Dasypus_novemcinctus
ENSCPOG00000040168	PTCD2	100	74.160	ENSDORG00000004921	Ptcd2	100	74.160	Dipodomys_ordii
ENSCPOG00000040168	PTCD2	100	62.694	ENSETEG00000016542	PTCD2	99	62.694	Echinops_telfairi
ENSCPOG00000040168	PTCD2	100	73.368	ENSEASG00005018038	PTCD2	100	73.368	Equus_asinus_asinus
ENSCPOG00000040168	PTCD2	100	73.368	ENSECAG00000007022	PTCD2	98	73.368	Equus_caballus
ENSCPOG00000040168	PTCD2	100	67.885	ENSEEUG00000014031	PTCD2	99	67.885	Erinaceus_europaeus
ENSCPOG00000040168	PTCD2	93	47.191	ENSELUG00000003584	ptcd2	93	47.191	Esox_lucius
ENSCPOG00000040168	PTCD2	100	66.057	ENSFCAG00000045432	PTCD2	82	66.057	Felis_catus
ENSCPOG00000040168	PTCD2	85	50.459	ENSFALG00000010299	PTCD2	99	50.459	Ficedula_albicollis
ENSCPOG00000040168	PTCD2	100	78.068	ENSFDAG00000018461	PTCD2	100	78.068	Fukomys_damarensis
ENSCPOG00000040168	PTCD2	91	47.578	ENSGMOG00000003637	ptcd2	91	47.578	Gadus_morhua
ENSCPOG00000040168	PTCD2	92	48.159	ENSGALG00000038260	PTCD2	100	46.753	Gallus_gallus
ENSCPOG00000040168	PTCD2	100	54.830	ENSGAGG00000021952	PTCD2	98	54.830	Gopherus_agassizii
ENSCPOG00000040168	PTCD2	100	74.935	ENSGGOG00000010695	PTCD2	99	74.935	Gorilla_gorilla
ENSCPOG00000040168	PTCD2	94	43.490	ENSHBUG00000009191	ptcd2	91	43.490	Haplochromis_burtoni
ENSCPOG00000040168	PTCD2	100	81.201	ENSHGLG00000001234	PTCD2	100	81.201	Heterocephalus_glaber_female
ENSCPOG00000040168	PTCD2	100	81.201	ENSHGLG00100015419	PTCD2	100	81.201	Heterocephalus_glaber_male
ENSCPOG00000040168	PTCD2	91	46.991	ENSHCOG00000001703	ptcd2	90	46.991	Hippocampus_comes
ENSCPOG00000040168	PTCD2	89	42.773	ENSIPUG00000006080	ptcd2	95	41.644	Ictalurus_punctatus
ENSCPOG00000040168	PTCD2	99	73.037	ENSSTOG00000006596	PTCD2	99	73.037	Ictidomys_tridecemlineatus
ENSCPOG00000040168	PTCD2	100	73.368	ENSJJAG00000024388	Ptcd2	100	73.368	Jaculus_jaculus
ENSCPOG00000040168	PTCD2	90	42.274	ENSKMAG00000009329	ptcd2	90	42.274	Kryptolebias_marmoratus
ENSCPOG00000040168	PTCD2	99	43.188	ENSLBEG00000024871	ptcd2	99	43.188	Labrus_bergylta
ENSCPOG00000040168	PTCD2	93	52.247	ENSLOCG00000011122	ptcd2	93	52.247	Lepisosteus_oculatus
ENSCPOG00000040168	PTCD2	81	73.955	ENSLAFG00000004115	PTCD2	100	73.955	Loxodonta_africana
ENSCPOG00000040168	PTCD2	100	75.457	ENSMFAG00000031516	PTCD2	99	75.457	Macaca_fascicularis
ENSCPOG00000040168	PTCD2	100	75.718	ENSMNEG00000007537	PTCD2	100	75.718	Macaca_nemestrina
ENSCPOG00000040168	PTCD2	100	75.457	ENSMLEG00000031093	PTCD2	99	75.457	Mandrillus_leucophaeus
ENSCPOG00000040168	PTCD2	97	45.699	ENSMAMG00000018529	ptcd2	94	45.699	Mastacembelus_armatus
ENSCPOG00000040168	PTCD2	94	43.490	ENSMZEG00005003625	ptcd2	91	43.490	Maylandia_zebra
ENSCPOG00000040168	PTCD2	91	49.138	ENSMGAG00000005033	PTCD2	100	49.138	Meleagris_gallopavo
ENSCPOG00000040168	PTCD2	100	54.047	ENSMAUG00000020253	Ptcd2	100	54.047	Mesocricetus_auratus
ENSCPOG00000040168	PTCD2	100	73.890	ENSMICG00000004535	PTCD2	99	73.890	Microcebus_murinus
ENSCPOG00000040168	PTCD2	100	71.540	ENSMOCG00000019985	Ptcd2	100	71.540	Microtus_ochrogaster
ENSCPOG00000040168	PTCD2	92	56.941	ENSMODG00000001695	PTCD2	92	56.941	Monodelphis_domestica
ENSCPOG00000040168	PTCD2	94	46.537	ENSMALG00000022372	ptcd2	92	46.537	Monopterus_albus
ENSCPOG00000040168	PTCD2	100	69.452	MGP_CAROLIEiJ_G0018829	Ptcd2	100	69.452	Mus_caroli
ENSCPOG00000040168	PTCD2	100	68.930	ENSMUSG00000021650	Ptcd2	100	68.930	Mus_musculus
ENSCPOG00000040168	PTCD2	100	71.018	MGP_PahariEiJ_G0015904	Ptcd2	100	71.018	Mus_pahari
ENSCPOG00000040168	PTCD2	100	69.713	MGP_SPRETEiJ_G0019711	Ptcd2	100	69.713	Mus_spretus
ENSCPOG00000040168	PTCD2	100	73.107	ENSMPUG00000014401	PTCD2	100	73.107	Mustela_putorius_furo
ENSCPOG00000040168	PTCD2	100	71.018	ENSMLUG00000007374	PTCD2	99	71.018	Myotis_lucifugus
ENSCPOG00000040168	PTCD2	100	72.585	ENSNGAG00000005027	Ptcd2	100	72.585	Nannospalax_galili
ENSCPOG00000040168	PTCD2	94	43.767	ENSNBRG00000008174	ptcd2	92	43.767	Neolamprologus_brichardi
ENSCPOG00000040168	PTCD2	86	43.333	ENSNBRG00000000092	-	100	43.333	Neolamprologus_brichardi
ENSCPOG00000040168	PTCD2	100	75.196	ENSNLEG00000004516	PTCD2	99	75.196	Nomascus_leucogenys
ENSCPOG00000040168	PTCD2	100	42.487	ENSMEUG00000014012	-	99	42.487	Notamacropus_eugenii
ENSCPOG00000040168	PTCD2	100	68.146	ENSOPRG00000007290	PTCD2	99	68.146	Ochotona_princeps
ENSCPOG00000040168	PTCD2	100	81.462	ENSODEG00000016417	PTCD2	100	81.462	Octodon_degus
ENSCPOG00000040168	PTCD2	78	45.819	ENSONIG00000011269	ptcd2	85	45.819	Oreochromis_niloticus
ENSCPOG00000040168	PTCD2	95	75.342	ENSOCUG00000007970	PTCD2	100	73.890	Oryctolagus_cuniculus
ENSCPOG00000040168	PTCD2	98	44.652	ENSORLG00000003851	ptcd2	92	44.652	Oryzias_latipes
ENSCPOG00000040168	PTCD2	98	43.850	ENSORLG00020009823	ptcd2	94	43.850	Oryzias_latipes_hni
ENSCPOG00000040168	PTCD2	91	45.014	ENSORLG00015016777	ptcd2	99	45.429	Oryzias_latipes_hsok
ENSCPOG00000040168	PTCD2	95	44.199	ENSOMEG00000012396	ptcd2	87	44.199	Oryzias_melastigma
ENSCPOG00000040168	PTCD2	100	70.235	ENSOGAG00000008390	PTCD2	99	70.235	Otolemur_garnettii
ENSCPOG00000040168	PTCD2	100	75.260	ENSOARG00000005087	PTCD2	99	75.260	Ovis_aries
ENSCPOG00000040168	PTCD2	100	74.935	ENSPPAG00000028480	PTCD2	99	74.935	Pan_paniscus
ENSCPOG00000040168	PTCD2	100	74.413	ENSPTRG00000016968	PTCD2	99	74.413	Pan_troglodytes
ENSCPOG00000040168	PTCD2	90	77.391	ENSPANG00000006611	PTCD2	89	77.391	Papio_anubis
ENSCPOG00000040168	PTCD2	93	46.518	ENSPKIG00000019896	ptcd2	93	46.518	Paramormyrops_kingsleyae
ENSCPOG00000040168	PTCD2	83	57.729	ENSPSIG00000014559	PTCD2	98	57.729	Pelodiscus_sinensis
ENSCPOG00000040168	PTCD2	100	70.649	ENSPEMG00000000884	Ptcd2	100	70.649	Peromyscus_maniculatus_bairdii
ENSCPOG00000040168	PTCD2	93	58.101	ENSPCIG00000029047	PTCD2	93	58.101	Phascolarctos_cinereus
ENSCPOG00000040168	PTCD2	97	42.318	ENSPLAG00000010456	ptcd2	93	42.318	Poecilia_latipinna
ENSCPOG00000040168	PTCD2	97	42.318	ENSPREG00000021797	ptcd2	91	42.318	Poecilia_reticulata
ENSCPOG00000040168	PTCD2	100	66.319	ENSPPYG00000015543	PTCD2	99	66.319	Pongo_abelii
ENSCPOG00000040168	PTCD2	81	64.725	ENSPCAG00000006806	PTCD2	98	64.725	Procavia_capensis
ENSCPOG00000040168	PTCD2	100	71.018	ENSPVAG00000010935	PTCD2	99	71.018	Pteropus_vampyrus
ENSCPOG00000040168	PTCD2	94	43.490	ENSPNYG00000003122	ptcd2	91	43.490	Pundamilia_nyererei
ENSCPOG00000040168	PTCD2	93	45.251	ENSPNAG00000021490	ptcd2	93	45.810	Pygocentrus_nattereri
ENSCPOG00000040168	PTCD2	100	71.279	ENSRNOG00000028403	Ptcd2	100	71.279	Rattus_norvegicus
ENSCPOG00000040168	PTCD2	100	71.279	ENSRBIG00000032929	PTCD2	99	71.279	Rhinopithecus_bieti
ENSCPOG00000040168	PTCD2	100	75.196	ENSRROG00000000080	PTCD2	100	75.196	Rhinopithecus_roxellana
ENSCPOG00000040168	PTCD2	100	73.890	ENSSBOG00000018911	PTCD2	100	73.890	Saimiri_boliviensis_boliviensis
ENSCPOG00000040168	PTCD2	93	59.777	ENSSHAG00000003833	PTCD2	93	59.777	Sarcophilus_harrisii
ENSCPOG00000040168	PTCD2	87	48.193	ENSSFOG00015015415	ptcd2	86	48.193	Scleropages_formosus
ENSCPOG00000040168	PTCD2	91	43.678	ENSSMAG00000010350	ptcd2	91	43.380	Scophthalmus_maximus
ENSCPOG00000040168	PTCD2	97	45.283	ENSSDUG00000008142	ptcd2	89	45.283	Seriola_dumerili
ENSCPOG00000040168	PTCD2	97	45.283	ENSSLDG00000015284	ptcd2	93	45.283	Seriola_lalandi_dorsalis
ENSCPOG00000040168	PTCD2	81	63.430	ENSSARG00000004983	PTCD2	99	63.430	Sorex_araneus
ENSCPOG00000040168	PTCD2	100	51.169	ENSSPUG00000000176	PTCD2	96	51.169	Sphenodon_punctatus
ENSCPOG00000040168	PTCD2	97	44.205	ENSSPAG00000008591	ptcd2	92	44.205	Stegastes_partitus
ENSCPOG00000040168	PTCD2	100	73.506	ENSSSCG00000016975	PTCD2	90	73.506	Sus_scrofa
ENSCPOG00000040168	PTCD2	90	50.435	ENSTGUG00000005705	PTCD2	99	50.435	Taeniopygia_guttata
ENSCPOG00000040168	PTCD2	100	70.496	ENSTBEG00000016559	PTCD2	99	70.496	Tupaia_belangeri
ENSCPOG00000040168	PTCD2	100	73.177	ENSTTRG00000011851	PTCD2	99	73.177	Tursiops_truncatus
ENSCPOG00000040168	PTCD2	100	71.279	ENSUAMG00000007583	PTCD2	90	71.279	Ursus_americanus
ENSCPOG00000040168	PTCD2	100	71.018	ENSUMAG00000007666	PTCD2	100	71.018	Ursus_maritimus
ENSCPOG00000040168	PTCD2	100	72.396	ENSVPAG00000009597	PTCD2	99	72.396	Vicugna_pacos
ENSCPOG00000040168	PTCD2	100	70.757	ENSVVUG00000007299	-	100	70.757	Vulpes_vulpes
ENSCPOG00000040168	PTCD2	95	49.311	ENSXETG00000031652	PTCD2	95	49.311	Xenopus_tropicalis
ENSCPOG00000040168	PTCD2	90	43.478	ENSXMAG00000005940	ptcd2	85	42.318	Xiphophorus_maculatus