EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCPOG00000040388 (Gene tree)
Gene ID
100731152
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
20597 bases
Position
chrDS562857.1:39158136-39178732
Accession
100731152
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000031441CSDPF00313.222.7e-7815
ENSCPOP00000031441CSDPF00313.222.7e-7825
ENSCPOP00000031441CSDPF00313.222.7e-7835
ENSCPOP00000031441CSDPF00313.222.7e-7845
ENSCPOP00000031441CSDPF00313.222.7e-7855
ENSCPOP00000031897CSDPF00313.225.4e-7815
ENSCPOP00000031897CSDPF00313.225.4e-7825
ENSCPOP00000031897CSDPF00313.225.4e-7835
ENSCPOP00000031897CSDPF00313.225.4e-7845
ENSCPOP00000031897CSDPF00313.225.4e-7855
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000041770CSDE1-2022319-ENSCPOP00000031441772 (aa)-A0A286Y0U2
ENSCPOT00000047286CSDE1-2012340XM_013142729ENSCPOP00000031897779 (aa)XP_012998183A0A286Y2X5
Gene Model
Click here to download ENSCPOG00000040388's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000040388's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000040388CSDE19994.880ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCPOG00000040388CSDE110072.222ENSAPOG00000015538csde110072.222Acanthochromis_polyacanthus
ENSCPOG00000040388CSDE110091.381ENSAMEG00000017129CSDE19491.381Ailuropoda_melanoleuca
ENSCPOG00000040388CSDE19076.486ENSACIG00000015175csde110076.486Amphilophus_citrinellus
ENSCPOG00000040388CSDE110072.348ENSAOCG00000011510csde110072.348Amphiprion_ocellaris
ENSCPOG00000040388CSDE110073.842ENSAPEG00000007194csde110072.348Amphiprion_percula
ENSCPOG00000040388CSDE110071.970ENSATEG00000003864csde110071.970Anabas_testudineus
ENSCPOG00000040388CSDE110085.678ENSAPLG00000008797CSDE110085.678Anas_platyrhynchos
ENSCPOG00000040388CSDE110086.842ENSACAG00000003120CSDE110086.842Anolis_carolinensis
ENSCPOG00000040388CSDE110093.476ENSANAG00000024665CSDE19593.476Aotus_nancymaae
ENSCPOG00000040388CSDE17964.626ENSANAG00000028396-9164.626Aotus_nancymaae
ENSCPOG00000040388CSDE110073.308ENSACLG00000013296csde110073.308Astatotilapia_calliptera
ENSCPOG00000040388CSDE110071.501ENSAMXG00000007436csde110071.501Astyanax_mexicanus
ENSCPOG00000040388CSDE110092.982ENSBTAG00000000678CSDE110091.762Bos_taurus
ENSCPOG00000040388CSDE110093.358ENSCJAG00000012565CSDE19795.098Callithrix_jacchus
ENSCPOG00000040388CSDE19892.119ENSCAFG00000009618CSDE19492.119Canis_familiaris
ENSCPOG00000040388CSDE110092.269ENSCAFG00020000481CSDE110092.269Canis_lupus_dingo
ENSCPOG00000040388CSDE110092.982ENSCHIG00000017250CSDE110091.762Capra_hircus
ENSCPOG00000040388CSDE19797.996ENSTSYG00000003747CSDE110097.996Carlito_syrichta
ENSCPOG00000040388CSDE110079.847ENSCAPG00000015128CSDE110079.847Cavia_aperea
ENSCPOG00000040388CSDE19798.218ENSCCAG00000036794CSDE110098.218Cebus_capucinus
ENSCPOG00000040388CSDE19375.772ENSCCAG00000033677-9975.772Cebus_capucinus
ENSCPOG00000040388CSDE19673.274ENSCCAG00000030878-9173.274Cebus_capucinus
ENSCPOG00000040388CSDE110093.609ENSCATG00000036962CSDE19898.812Cercocebus_atys
ENSCPOG00000040388CSDE110094.612ENSCLAG00000006618CSDE110094.612Chinchilla_lanigera
ENSCPOG00000040388CSDE110093.609ENSCSAG00000001658CSDE19593.609Chlorocebus_sabaeus
ENSCPOG00000040388CSDE110096.970ENSCHOG00000000918CSDE18396.970Choloepus_hoffmanni
ENSCPOG00000040388CSDE110087.218ENSCPBG00000016547CSDE110087.218Chrysemys_picta_bellii
ENSCPOG00000040388CSDE19741.082ENSCING00000014465-9641.082Ciona_intestinalis
ENSCPOG00000040388CSDE19640.149ENSCSAVG00000008100-9840.149Ciona_savignyi
ENSCPOG00000040388CSDE19988.214ENSCANG00000031069-9988.214Colobus_angolensis_palliatus
ENSCPOG00000040388CSDE110093.609ENSCANG00000035096CSDE19898.812Colobus_angolensis_palliatus
ENSCPOG00000040388CSDE110079.404ENSCGRG00001014011-10079.404Cricetulus_griseus_chok1gshd
ENSCPOG00000040388CSDE110093.484ENSCGRG00001016833-10093.484Cricetulus_griseus_chok1gshd
ENSCPOG00000040388CSDE110078.723ENSCGRG00000005831-10078.723Cricetulus_griseus_crigri
ENSCPOG00000040388CSDE19797.996ENSCGRG00000002225-10097.996Cricetulus_griseus_crigri
ENSCPOG00000040388CSDE110072.061ENSCSEG00000002620csde110072.061Cynoglossus_semilaevis
ENSCPOG00000040388CSDE110072.556ENSCVAG00000001344csde110072.195Cyprinodon_variegatus
ENSCPOG00000040388CSDE110074.093ENSDARG00000074758csde110074.868Danio_rerio
ENSCPOG00000040388CSDE110092.025ENSDNOG00000010287-9392.025Dasypus_novemcinctus
ENSCPOG00000040388CSDE18070.342ENSDNOG00000034464-10070.342Dasypus_novemcinctus
ENSCPOG00000040388CSDE110092.982ENSDORG00000011609Csde110092.982Dipodomys_ordii
ENSCPOG00000040388CSDE19446.516FBgn0263352Unr8145.817Drosophila_melanogaster
ENSCPOG00000040388CSDE17868.106ENSETEG00000007109-9968.106Echinops_telfairi
ENSCPOG00000040388CSDE19079.969ENSETEG00000006280-10079.969Echinops_telfairi
ENSCPOG00000040388CSDE19971.701ENSETEG00000013678-9971.701Echinops_telfairi
ENSCPOG00000040388CSDE19398.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSCPOG00000040388CSDE19953.875ENSEBUG00000008647csde19951.971Eptatretus_burgeri
ENSCPOG00000040388CSDE110093.860ENSEASG00005006284CSDE110093.860Equus_asinus_asinus
ENSCPOG00000040388CSDE110093.860ENSECAG00000020885CSDE110093.860Equus_caballus
ENSCPOG00000040388CSDE19299.476ENSEEUG00000006286CSDE16899.476Erinaceus_europaeus
ENSCPOG00000040388CSDE110071.069ENSELUG00000015507csde110071.069Esox_lucius
ENSCPOG00000040388CSDE110093.734ENSFCAG00000029266CSDE110092.522Felis_catus
ENSCPOG00000040388CSDE110087.218ENSFALG00000003407CSDE110087.218Ficedula_albicollis
ENSCPOG00000040388CSDE110093.985ENSFDAG00000007882CSDE110093.985Fukomys_damarensis
ENSCPOG00000040388CSDE110072.682ENSFHEG00000010799csde110072.682Fundulus_heteroclitus
ENSCPOG00000040388CSDE19973.024ENSGMOG00000012731csde110073.024Gadus_morhua
ENSCPOG00000040388CSDE19886.829ENSGALG00000002139CSDE19886.829Gallus_gallus
ENSCPOG00000040388CSDE19269.764ENSGAFG00000005241csde19569.764Gambusia_affinis
ENSCPOG00000040388CSDE19973.810ENSGACG00000004544csde110073.810Gasterosteus_aculeatus
ENSCPOG00000040388CSDE110086.842ENSGAGG00000017685CSDE110086.842Gopherus_agassizii
ENSCPOG00000040388CSDE110093.609ENSGGOG00000002164CSDE110092.395Gorilla_gorilla
ENSCPOG00000040388CSDE110072.693ENSHBUG00000020315csde110071.808Haplochromis_burtoni
ENSCPOG00000040388CSDE19989.978ENSHGLG00000010039-10089.978Heterocephalus_glaber_female
ENSCPOG00000040388CSDE19985.392ENSHGLG00000008555-9985.392Heterocephalus_glaber_female
ENSCPOG00000040388CSDE110085.204ENSHGLG00000003829-10085.204Heterocephalus_glaber_female
ENSCPOG00000040388CSDE19980.843ENSHGLG00000007471-9880.843Heterocephalus_glaber_female
ENSCPOG00000040388CSDE19975.659ENSHGLG00000000650-9975.659Heterocephalus_glaber_female
ENSCPOG00000040388CSDE110084.461ENSHGLG00000009620-10084.712Heterocephalus_glaber_female
ENSCPOG00000040388CSDE110078.788ENSHGLG00000019549-10078.788Heterocephalus_glaber_female
ENSCPOG00000040388CSDE19979.975ENSHGLG00100002245-9979.975Heterocephalus_glaber_male
ENSCPOG00000040388CSDE110075.032ENSHGLG00100001846-9977.076Heterocephalus_glaber_male
ENSCPOG00000040388CSDE19782.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSCPOG00000040388CSDE19989.755ENSHGLG00100006910-10089.755Heterocephalus_glaber_male
ENSCPOG00000040388CSDE19786.888ENSHGLG00100012072-9886.888Heterocephalus_glaber_male
ENSCPOG00000040388CSDE19480.597ENSHGLG00100004195-10080.597Heterocephalus_glaber_male
ENSCPOG00000040388CSDE19978.289ENSHGLG00100007287-9878.289Heterocephalus_glaber_male
ENSCPOG00000040388CSDE110094.110ENSHGLG00100019438-10094.110Heterocephalus_glaber_male
ENSCPOG00000040388CSDE110072.215ENSHCOG00000004158csde110070.923Hippocampus_comes
ENSCPOG00000040388CSDE110071.879ENSIPUG00000000355csde110071.879Ictalurus_punctatus
ENSCPOG00000040388CSDE110077.792ENSSTOG00000030994-10077.792Ictidomys_tridecemlineatus
ENSCPOG00000040388CSDE19293.007ENSSTOG00000032722-9893.007Ictidomys_tridecemlineatus
ENSCPOG00000040388CSDE110093.233ENSJJAG00000019571Csde110093.233Jaculus_jaculus
ENSCPOG00000040388CSDE110072.727ENSKMAG00000005685csde110072.367Kryptolebias_marmoratus
ENSCPOG00000040388CSDE110072.096ENSLBEG00000014770csde110072.096Labrus_bergylta
ENSCPOG00000040388CSDE110074.938ENSLACG00000018452CSDE19474.938Latimeria_chalumnae
ENSCPOG00000040388CSDE110076.161ENSLOCG00000010413csde19476.161Lepisosteus_oculatus
ENSCPOG00000040388CSDE110091.001ENSLAFG00000007150CSDE19691.001Loxodonta_africana
ENSCPOG00000040388CSDE110093.609ENSMFAG00000003674CSDE19898.812Macaca_fascicularis
ENSCPOG00000040388CSDE110093.609ENSMMUG00000001974CSDE110092.395Macaca_mulatta
ENSCPOG00000040388CSDE110093.609ENSMNEG00000045247CSDE19898.812Macaca_nemestrina
ENSCPOG00000040388CSDE110093.358ENSMLEG00000038673CSDE19593.358Mandrillus_leucophaeus
ENSCPOG00000040388CSDE110072.727ENSMAMG00000008821csde110072.727Mastacembelus_armatus
ENSCPOG00000040388CSDE110073.308ENSMZEG00005021675csde110071.808Maylandia_zebra
ENSCPOG00000040388CSDE110085.443ENSMGAG00000016381CSDE110085.443Meleagris_gallopavo
ENSCPOG00000040388CSDE110093.484ENSMAUG00000014031Csde110093.484Mesocricetus_auratus
ENSCPOG00000040388CSDE19798.661ENSMICG00000002050CSDE19998.661Microcebus_murinus
ENSCPOG00000040388CSDE110093.484ENSMOCG00000018960Csde110093.484Microtus_ochrogaster
ENSCPOG00000040388CSDE110072.096ENSMMOG00000015075csde110072.096Mola_mola
ENSCPOG00000040388CSDE110090.852ENSMODG00000004685CSDE110090.852Monodelphis_domestica
ENSCPOG00000040388CSDE110072.348ENSMALG00000007132csde110072.348Monopterus_albus
ENSCPOG00000040388CSDE110093.233MGP_CAROLIEiJ_G0025444Csde110093.233Mus_caroli
ENSCPOG00000040388CSDE110093.358ENSMUSG00000068823Csde110093.358Mus_musculus
ENSCPOG00000040388CSDE110093.609MGP_PahariEiJ_G0026888Csde110093.609Mus_pahari
ENSCPOG00000040388CSDE110093.609MGP_SPRETEiJ_G0026394Csde110093.609Mus_spretus
ENSCPOG00000040388CSDE19893.614ENSMPUG00000005753CSDE19993.614Mustela_putorius_furo
ENSCPOG00000040388CSDE110091.508ENSMLUG00000005681CSDE19491.508Myotis_lucifugus
ENSCPOG00000040388CSDE19770.824ENSNGAG00000012599-10070.824Nannospalax_galili
ENSCPOG00000040388CSDE110093.484ENSNGAG00000021929Csde110093.484Nannospalax_galili
ENSCPOG00000040388CSDE110071.808ENSNBRG00000020808csde110071.808Neolamprologus_brichardi
ENSCPOG00000040388CSDE110093.484ENSNLEG00000004842CSDE19792.269Nomascus_leucogenys
ENSCPOG00000040388CSDE19897.087ENSMEUG00000002677CSDE19397.087Notamacropus_eugenii
ENSCPOG00000040388CSDE19896.117ENSOPRG00000005002CSDE17696.117Ochotona_princeps
ENSCPOG00000040388CSDE19995.030ENSODEG00000007383-9995.030Octodon_degus
ENSCPOG00000040388CSDE19768.363ENSODEG00000005979-9868.363Octodon_degus
ENSCPOG00000040388CSDE110071.726ENSONIG00000009309csde110071.726Oreochromis_niloticus
ENSCPOG00000040388CSDE110074.813ENSOANG00000003346-10074.813Ornithorhynchus_anatinus
ENSCPOG00000040388CSDE110092.857ENSOCUG00000016438CSDE19592.857Oryctolagus_cuniculus
ENSCPOG00000040388CSDE110071.934ENSORLG00000000707csde110071.934Oryzias_latipes
ENSCPOG00000040388CSDE110073.308ENSORLG00020005148csde110071.726Oryzias_latipes_hni
ENSCPOG00000040388CSDE110073.308ENSORLG00015019415csde110071.934Oryzias_latipes_hsok
ENSCPOG00000040388CSDE110073.967ENSOMEG00000015656csde110072.727Oryzias_melastigma
ENSCPOG00000040388CSDE110092.649ENSOGAG00000012127CSDE19492.649Otolemur_garnettii
ENSCPOG00000040388CSDE110091.888ENSOARG00000020034CSDE19491.888Ovis_aries
ENSCPOG00000040388CSDE110093.609ENSPPAG00000025861CSDE19795.588Pan_paniscus
ENSCPOG00000040388CSDE110093.734ENSPPRG00000006747CSDE19593.734Panthera_pardus
ENSCPOG00000040388CSDE110093.734ENSPTIG00000015468CSDE110093.734Panthera_tigris_altaica
ENSCPOG00000040388CSDE110093.609ENSPTRG00000033721CSDE110093.609Pan_troglodytes
ENSCPOG00000040388CSDE110093.609ENSPANG00000018873CSDE110092.395Papio_anubis
ENSCPOG00000040388CSDE110071.934ENSPKIG00000009459csde110071.934Paramormyrops_kingsleyae
ENSCPOG00000040388CSDE19686.283ENSPSIG00000003823CSDE19686.283Pelodiscus_sinensis
ENSCPOG00000040388CSDE110071.717ENSPMGG00000000772csde110071.717Periophthalmus_magnuspinnatus
ENSCPOG00000040388CSDE110093.734ENSPEMG00000020357-10093.734Peromyscus_maniculatus_bairdii
ENSCPOG00000040388CSDE110090.977ENSPCIG00000022587CSDE110090.977Phascolarctos_cinereus
ENSCPOG00000040388CSDE19973.892ENSPFOG00000012664csde110074.384Poecilia_formosa
ENSCPOG00000040388CSDE19766.923ENSPLAG00000017680csde19366.923Poecilia_latipinna
ENSCPOG00000040388CSDE19866.920ENSPMEG00000005094csde19666.920Poecilia_mexicana
ENSCPOG00000040388CSDE110072.070ENSPREG00000011631csde110070.000Poecilia_reticulata
ENSCPOG00000040388CSDE110093.609ENSPPYG00000000996CSDE110093.609Pongo_abelii
ENSCPOG00000040388CSDE110097.342ENSPCAG00000014368CSDE18997.342Procavia_capensis
ENSCPOG00000040388CSDE19074.627ENSPCOG00000008223-8974.627Propithecus_coquereli
ENSCPOG00000040388CSDE110093.484ENSPCOG00000017893CSDE110093.484Propithecus_coquereli
ENSCPOG00000040388CSDE110086.692ENSPVAG00000008225CSDE19586.692Pteropus_vampyrus
ENSCPOG00000040388CSDE110072.693ENSPNYG00000013745csde110071.808Pundamilia_nyererei
ENSCPOG00000040388CSDE110073.091ENSPNAG00000001958csde110071.970Pygocentrus_nattereri
ENSCPOG00000040388CSDE110093.233ENSRNOG00000061058Csde110093.233Rattus_norvegicus
ENSCPOG00000040388CSDE110087.860ENSRBIG00000038966-9487.860Rhinopithecus_bieti
ENSCPOG00000040388CSDE19597.005ENSRBIG00000038088-9997.005Rhinopithecus_bieti
ENSCPOG00000040388CSDE110093.609ENSRROG00000043101CSDE19898.578Rhinopithecus_roxellana
ENSCPOG00000040388CSDE110093.358ENSSBOG00000035592CSDE19593.358Saimiri_boliviensis_boliviensis
ENSCPOG00000040388CSDE110089.607ENSSHAG00000009831CSDE110089.607Sarcophilus_harrisii
ENSCPOG00000040388CSDE110072.943ENSSFOG00015007498csde110073.192Scleropages_formosus
ENSCPOG00000040388CSDE110072.727ENSSMAG00000007203csde110072.727Scophthalmus_maximus
ENSCPOG00000040388CSDE110072.096ENSSDUG00000015380csde110072.096Seriola_dumerili
ENSCPOG00000040388CSDE110073.217ENSSLDG00000008819csde110073.217Seriola_lalandi_dorsalis
ENSCPOG00000040388CSDE110091.635ENSSARG00000000738CSDE19491.635Sorex_araneus
ENSCPOG00000040388CSDE110086.466ENSSPUG00000008714CSDE110086.466Sphenodon_punctatus
ENSCPOG00000040388CSDE110073.717ENSSPAG00000000716csde110072.222Stegastes_partitus
ENSCPOG00000040388CSDE110093.734ENSSSCG00000006752CSDE110092.522Sus_scrofa
ENSCPOG00000040388CSDE110086.250ENSTGUG00000000972CSDE110086.250Taeniopygia_guttata
ENSCPOG00000040388CSDE110069.406ENSTRUG00000007996csde110069.406Takifugu_rubripes
ENSCPOG00000040388CSDE19369.732ENSTNIG00000010878csde110069.732Tetraodon_nigroviridis
ENSCPOG00000040388CSDE18298.718ENSTBEG00000011880-6298.718Tupaia_belangeri
ENSCPOG00000040388CSDE110091.888ENSTTRG00000015583CSDE19491.888Tursiops_truncatus
ENSCPOG00000040388CSDE18990.228ENSUAMG00000021779-9990.228Ursus_americanus
ENSCPOG00000040388CSDE18986.470ENSUAMG00000024289-9986.470Ursus_americanus
ENSCPOG00000040388CSDE110085.044ENSUMAG00000009720-9785.044Ursus_maritimus
ENSCPOG00000040388CSDE19398.812ENSUMAG00000011714-9998.812Ursus_maritimus
ENSCPOG00000040388CSDE110098.592ENSVPAG00000000749CSDE17998.592Vicugna_pacos
ENSCPOG00000040388CSDE19092.398ENSVVUG00000009890CSDE19492.398Vulpes_vulpes
ENSCPOG00000040388CSDE110081.024ENSXETG00000021448csde110081.024Xenopus_tropicalis
ENSCPOG00000040388CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCPOG00000040388CSDE110073.308ENSXMAG00000009080csde110071.255Xiphophorus_maculatus

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