EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000000102 (Gene tree)
Gene ID: 103232185
Gene Symbol: -
Alias: -
Full Name: poly(A) binding protein cytoplasmic 1 like 2B
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 603 bases
Position: chrX:62691935-62692537
Accession: 103232185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000017890	RRM_1	PF00076.22	2e-42	1	2
ENSCSAP00000017890	RRM_1	PF00076.22	2e-42	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000018434	-	603	-	ENSCSAP00000017890	200 (aa)	XP_007990278	A0A0D9SAK1

Gene Model

Click here to download ENSCSAG00000000102's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03013	RNA transport	KEGG
csab03015	mRNA surveillance pathway	KEGG
csab03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000000102's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000000102	-	75	32.895	ENSCSAG00000006755	ELAVL3	65	32.895
ENSCSAG00000000102	-	98	80.102	ENSCSAG00000012017	PABPC1	58	80.102
ENSCSAG00000000102	-	99	76.650	ENSCSAG00000001135	PABPC4	56	76.650
ENSCSAG00000000102	-	85	32.895	ENSCSAG00000008155	ELAVL1	94	32.895
ENSCSAG00000000102	-	99	70.558	ENSCSAG00000014242	PABPC1L	60	70.558
ENSCSAG00000000102	-	79	33.333	ENSCSAG00000004734	TIAL1	73	33.333
ENSCSAG00000000102	-	98	59.375	ENSCSAG00000000065	PABPC5	93	59.694

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000000102	-	100	100.000	ENSG00000184388	PABPC1L2B	100	100.000	Homo_sapiens
ENSCSAG00000000102	-	100	100.000	ENSG00000186288	PABPC1L2A	100	100.000	Homo_sapiens
ENSCSAG00000000102	-	98	80.102	ENSAPOG00000015105	pabpc1a	58	80.102	Acanthochromis_polyacanthus
ENSCSAG00000000102	-	98	79.592	ENSAPOG00000017776	pabpc1b	61	79.592	Acanthochromis_polyacanthus
ENSCSAG00000000102	-	100	99.500	ENSAMEG00000019441	-	100	99.500	Ailuropoda_melanoleuca
ENSCSAG00000000102	-	98	80.102	ENSACIG00000004685	pabpc1a	58	80.102	Amphilophus_citrinellus
ENSCSAG00000000102	-	98	78.571	ENSACIG00000018366	pabpc1b	60	78.571	Amphilophus_citrinellus
ENSCSAG00000000102	-	98	80.102	ENSAOCG00000019839	pabpc1b	59	80.102	Amphiprion_ocellaris
ENSCSAG00000000102	-	98	80.102	ENSAOCG00000011656	pabpc1a	58	80.102	Amphiprion_ocellaris
ENSCSAG00000000102	-	98	80.102	ENSAPEG00000010435	pabpc1b	59	80.102	Amphiprion_percula
ENSCSAG00000000102	-	98	80.102	ENSAPEG00000006963	pabpc1a	58	80.102	Amphiprion_percula
ENSCSAG00000000102	-	98	79.082	ENSATEG00000012917	pabpc1b	59	79.082	Anabas_testudineus
ENSCSAG00000000102	-	98	80.102	ENSATEG00000024852	pabpc1a	58	80.102	Anabas_testudineus
ENSCSAG00000000102	-	100	100.000	ENSANAG00000019429	-	100	100.000	Aotus_nancymaae
ENSCSAG00000000102	-	100	100.000	ENSANAG00000019431	-	100	100.000	Aotus_nancymaae
ENSCSAG00000000102	-	98	80.102	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSCSAG00000000102	-	98	78.061	ENSACLG00000014335	pabpc1b	59	78.061	Astatotilapia_calliptera
ENSCSAG00000000102	-	98	79.592	ENSAMXG00000008599	pabpc1b	59	79.592	Astyanax_mexicanus
ENSCSAG00000000102	-	100	99.000	ENSBTAG00000052491	-	94	99.000	Bos_taurus
ENSCSAG00000000102	-	100	98.500	ENSBTAG00000050902	-	95	98.500	Bos_taurus
ENSCSAG00000000102	-	100	100.000	ENSCJAG00000041326	-	100	100.000	Callithrix_jacchus
ENSCSAG00000000102	-	100	99.500	ENSCAFG00020002052	-	96	99.500	Canis_lupus_dingo
ENSCSAG00000000102	-	100	99.500	ENSCHIG00000011138	-	100	99.500	Capra_hircus
ENSCSAG00000000102	-	100	99.000	ENSCHIG00000006283	-	100	99.000	Capra_hircus
ENSCSAG00000000102	-	100	99.500	ENSTSYG00000001775	-	100	99.500	Carlito_syrichta
ENSCSAG00000000102	-	100	99.000	ENSCPOG00000009525	-	100	99.000	Cavia_porcellus
ENSCSAG00000000102	-	100	100.000	ENSCCAG00000031524	-	100	100.000	Cebus_capucinus
ENSCSAG00000000102	-	100	100.000	ENSCATG00000042826	-	100	100.000	Cercocebus_atys
ENSCSAG00000000102	-	100	100.000	ENSCATG00000043125	-	100	100.000	Cercocebus_atys
ENSCSAG00000000102	-	100	95.500	ENSCLAG00000017409	-	100	95.500	Chinchilla_lanigera
ENSCSAG00000000102	-	100	95.500	ENSCLAG00000017412	-	100	95.500	Chinchilla_lanigera
ENSCSAG00000000102	-	99	92.462	ENSCGRG00001023387	-	98	92.462	Cricetulus_griseus_chok1gshd
ENSCSAG00000000102	-	98	80.102	ENSCSEG00000013324	pabpc1a	58	80.102	Cynoglossus_semilaevis
ENSCSAG00000000102	-	98	79.082	ENSCSEG00000015241	-	58	79.082	Cynoglossus_semilaevis
ENSCSAG00000000102	-	98	80.102	ENSCVAG00000021872	pabpc1a	58	80.102	Cyprinodon_variegatus
ENSCSAG00000000102	-	98	79.592	ENSCVAG00000005489	pabpc1b	58	79.592	Cyprinodon_variegatus
ENSCSAG00000000102	-	98	79.592	ENSDARG00000017219	pabpc1a	58	79.592	Danio_rerio
ENSCSAG00000000102	-	98	79.082	ENSDARG00000021140	pabpc1b	92	86.885	Danio_rerio
ENSCSAG00000000102	-	100	97.000	ENSDNOG00000030926	-	100	97.000	Dasypus_novemcinctus
ENSCSAG00000000102	-	100	96.500	ENSDORG00000011362	-	100	96.500	Dipodomys_ordii
ENSCSAG00000000102	-	100	99.000	ENSEASG00005010399	-	95	99.000	Equus_asinus_asinus
ENSCSAG00000000102	-	100	99.000	ENSECAG00000002620	-	95	99.000	Equus_caballus
ENSCSAG00000000102	-	100	94.500	ENSEEUG00000008203	-	100	94.500	Erinaceus_europaeus
ENSCSAG00000000102	-	98	80.102	ENSELUG00000015062	-	58	80.102	Esox_lucius
ENSCSAG00000000102	-	98	79.592	ENSELUG00000003614	pabpc1a	60	79.592	Esox_lucius
ENSCSAG00000000102	-	93	55.615	ENSELUG00000005389	-	78	55.615	Esox_lucius
ENSCSAG00000000102	-	100	99.500	ENSFCAG00000039701	-	100	99.500	Felis_catus
ENSCSAG00000000102	-	100	99.000	ENSFDAG00000005484	-	100	99.000	Fukomys_damarensis
ENSCSAG00000000102	-	98	80.102	ENSFHEG00000018979	pabpc1a	58	80.102	Fundulus_heteroclitus
ENSCSAG00000000102	-	98	79.082	ENSFHEG00000008186	pabpc1b	58	79.082	Fundulus_heteroclitus
ENSCSAG00000000102	-	98	79.592	ENSGMOG00000013448	pabpc1a	58	79.592	Gadus_morhua
ENSCSAG00000000102	-	98	79.592	ENSGMOG00000002448	-	59	79.592	Gadus_morhua
ENSCSAG00000000102	-	98	79.592	ENSGAFG00000010193	pabpc1b	60	79.592	Gambusia_affinis
ENSCSAG00000000102	-	98	80.102	ENSGAFG00000019750	pabpc1a	61	80.102	Gambusia_affinis
ENSCSAG00000000102	-	98	80.102	ENSGACG00000003572	pabpc1a	58	80.102	Gasterosteus_aculeatus
ENSCSAG00000000102	-	98	80.612	ENSGACG00000003771	pabpc1b	65	80.612	Gasterosteus_aculeatus
ENSCSAG00000000102	-	100	100.000	ENSGGOG00000043933	-	100	100.000	Gorilla_gorilla
ENSCSAG00000000102	-	100	100.000	ENSGGOG00000038606	-	100	100.000	Gorilla_gorilla
ENSCSAG00000000102	-	98	78.061	ENSHBUG00000002075	pabpc1b	61	78.061	Haplochromis_burtoni
ENSCSAG00000000102	-	98	80.102	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSCSAG00000000102	-	100	97.000	ENSHGLG00000019762	-	100	97.000	Heterocephalus_glaber_female
ENSCSAG00000000102	-	100	97.000	ENSHGLG00000019668	-	100	97.000	Heterocephalus_glaber_female
ENSCSAG00000000102	-	100	97.000	ENSHGLG00100020854	-	100	97.000	Heterocephalus_glaber_male
ENSCSAG00000000102	-	95	68.783	ENSHCOG00000003175	pabpc1b	69	67.500	Hippocampus_comes
ENSCSAG00000000102	-	98	80.102	ENSHCOG00000013502	pabpc1a	58	80.102	Hippocampus_comes
ENSCSAG00000000102	-	98	79.592	ENSIPUG00000010791	-	61	79.592	Ictalurus_punctatus
ENSCSAG00000000102	-	98	60.309	ENSIPUG00000021244	-	52	60.309	Ictalurus_punctatus
ENSCSAG00000000102	-	98	79.592	ENSIPUG00000008848	pabpc1a	59	79.592	Ictalurus_punctatus
ENSCSAG00000000102	-	100	98.500	ENSSTOG00000022096	-	100	98.500	Ictidomys_tridecemlineatus
ENSCSAG00000000102	-	100	98.500	ENSSTOG00000026028	-	100	98.500	Ictidomys_tridecemlineatus
ENSCSAG00000000102	-	100	97.000	ENSJJAG00000007037	-	100	97.000	Jaculus_jaculus
ENSCSAG00000000102	-	98	79.082	ENSKMAG00000008049	pabpc1b	64	79.082	Kryptolebias_marmoratus
ENSCSAG00000000102	-	98	80.102	ENSKMAG00000000605	pabpc1a	58	80.102	Kryptolebias_marmoratus
ENSCSAG00000000102	-	98	80.102	ENSLBEG00000024002	-	58	80.102	Labrus_bergylta
ENSCSAG00000000102	-	98	80.102	ENSLBEG00000026845	pabpc1b	59	80.102	Labrus_bergylta
ENSCSAG00000000102	-	99	97.990	ENSLAFG00000023096	-	99	97.990	Loxodonta_africana
ENSCSAG00000000102	-	100	99.502	ENSMFAG00000028878	-	100	99.502	Macaca_fascicularis
ENSCSAG00000000102	-	100	100.000	ENSMMUG00000037681	-	100	100.000	Macaca_mulatta
ENSCSAG00000000102	-	100	100.000	ENSMMUG00000009740	-	100	100.000	Macaca_mulatta
ENSCSAG00000000102	-	100	100.000	ENSMMUG00000039929	-	100	100.000	Macaca_mulatta
ENSCSAG00000000102	-	100	100.000	ENSMNEG00000037732	-	100	100.000	Macaca_nemestrina
ENSCSAG00000000102	-	100	100.000	ENSMLEG00000027495	-	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000000102	-	98	79.082	ENSMAMG00000014610	pabpc1b	60	79.082	Mastacembelus_armatus
ENSCSAG00000000102	-	98	80.102	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSCSAG00000000102	-	98	80.102	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSCSAG00000000102	-	98	78.061	ENSMZEG00005026745	pabpc1b	59	78.061	Maylandia_zebra
ENSCSAG00000000102	-	100	99.000	ENSMICG00000047642	-	100	99.000	Microcebus_murinus
ENSCSAG00000000102	-	98	80.102	ENSMMOG00000018009	pabpc1b	63	80.102	Mola_mola
ENSCSAG00000000102	-	98	80.102	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSCSAG00000000102	-	98	67.179	ENSMODG00000015024	-	57	67.179	Monodelphis_domestica
ENSCSAG00000000102	-	98	73.980	ENSMODG00000013156	-	58	73.980	Monodelphis_domestica
ENSCSAG00000000102	-	98	79.082	ENSMALG00000006066	pabpc1b	64	79.082	Monopterus_albus
ENSCSAG00000000102	-	98	80.102	ENSMALG00000013020	-	62	80.102	Monopterus_albus
ENSCSAG00000000102	-	100	96.500	ENSNGAG00000012688	-	100	96.500	Nannospalax_galili
ENSCSAG00000000102	-	98	80.102	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSCSAG00000000102	-	98	78.061	ENSNBRG00000013737	pabpc1b	63	78.061	Neolamprologus_brichardi
ENSCSAG00000000102	-	100	100.000	ENSNLEG00000018128	-	100	100.000	Nomascus_leucogenys
ENSCSAG00000000102	-	100	97.500	ENSODEG00000018540	-	100	97.500	Octodon_degus
ENSCSAG00000000102	-	98	80.102	ENSONIG00000006871	-	58	80.102	Oreochromis_niloticus
ENSCSAG00000000102	-	98	78.061	ENSONIG00000002717	pabpc1b	59	78.061	Oreochromis_niloticus
ENSCSAG00000000102	-	100	99.500	ENSOCUG00000002565	-	100	99.500	Oryctolagus_cuniculus
ENSCSAG00000000102	-	98	77.041	ENSORLG00000003008	-	58	77.041	Oryzias_latipes
ENSCSAG00000000102	-	98	80.102	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSCSAG00000000102	-	98	80.102	ENSORLG00020022398	pabpc1a	58	80.102	Oryzias_latipes_hni
ENSCSAG00000000102	-	98	77.041	ENSORLG00020022259	-	58	77.041	Oryzias_latipes_hni
ENSCSAG00000000102	-	98	77.041	ENSORLG00015010932	-	58	77.041	Oryzias_latipes_hsok
ENSCSAG00000000102	-	98	80.102	ENSORLG00015013633	pabpc1	58	80.102	Oryzias_latipes_hsok
ENSCSAG00000000102	-	98	80.102	ENSOMEG00000020219	pabpc1a	58	80.102	Oryzias_melastigma
ENSCSAG00000000102	-	98	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSCSAG00000000102	-	100	99.000	ENSOGAG00000029513	-	100	99.000	Otolemur_garnettii
ENSCSAG00000000102	-	100	99.000	ENSOGAG00000026047	-	100	99.000	Otolemur_garnettii
ENSCSAG00000000102	-	100	99.000	ENSOARG00000005943	-	100	99.000	Ovis_aries
ENSCSAG00000000102	-	100	100.000	ENSPPAG00000012920	-	100	100.000	Pan_paniscus
ENSCSAG00000000102	-	100	99.500	ENSPPRG00000011809	-	100	99.500	Panthera_pardus
ENSCSAG00000000102	-	100	99.500	ENSPPRG00000011804	-	100	99.500	Panthera_pardus
ENSCSAG00000000102	-	100	100.000	ENSPTRG00000028252	-	100	100.000	Pan_troglodytes
ENSCSAG00000000102	-	100	100.000	ENSPANG00000011549	-	100	100.000	Papio_anubis
ENSCSAG00000000102	-	98	79.592	ENSPKIG00000005676	pabpc1b	59	79.592	Paramormyrops_kingsleyae
ENSCSAG00000000102	-	98	79.082	ENSPMGG00000022487	pabpc1a	77	79.082	Periophthalmus_magnuspinnatus
ENSCSAG00000000102	-	98	79.592	ENSPMGG00000023134	-	81	79.592	Periophthalmus_magnuspinnatus
ENSCSAG00000000102	-	98	79.082	ENSPFOG00000005917	pabpc1b	58	79.082	Poecilia_formosa
ENSCSAG00000000102	-	98	80.102	ENSPFOG00000010815	pabpc1a	57	80.102	Poecilia_formosa
ENSCSAG00000000102	-	98	80.102	ENSPLAG00000004114	pabpc1a	58	80.102	Poecilia_latipinna
ENSCSAG00000000102	-	98	79.592	ENSPLAG00000001388	pabpc1b	58	79.592	Poecilia_latipinna
ENSCSAG00000000102	-	98	80.102	ENSPMEG00000001334	pabpc1a	58	80.102	Poecilia_mexicana
ENSCSAG00000000102	-	98	79.082	ENSPMEG00000014399	pabpc1b	58	79.082	Poecilia_mexicana
ENSCSAG00000000102	-	98	80.102	ENSPREG00000019595	pabpc1a	92	86.885	Poecilia_reticulata
ENSCSAG00000000102	-	98	79.592	ENSPREG00000010911	pabpc1b	60	79.592	Poecilia_reticulata
ENSCSAG00000000102	-	100	100.000	ENSPPYG00000020468	-	100	100.000	Pongo_abelii
ENSCSAG00000000102	-	100	98.500	ENSPCAG00000005308	-	100	98.500	Procavia_capensis
ENSCSAG00000000102	-	100	98.500	ENSPCOG00000026349	-	100	98.500	Propithecus_coquereli
ENSCSAG00000000102	-	100	95.500	ENSPVAG00000016117	-	100	95.500	Pteropus_vampyrus
ENSCSAG00000000102	-	98	80.102	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSCSAG00000000102	-	98	78.061	ENSPNYG00000012578	pabpc1b	61	78.061	Pundamilia_nyererei
ENSCSAG00000000102	-	98	80.102	ENSPNAG00000024626	pabpc1b	58	80.102	Pygocentrus_nattereri
ENSCSAG00000000102	-	98	78.571	ENSPNAG00000028408	pabpc1a	65	78.571	Pygocentrus_nattereri
ENSCSAG00000000102	-	99	78.680	ENSRBIG00000028738	-	69	78.680	Rhinopithecus_bieti
ENSCSAG00000000102	-	100	100.000	ENSRBIG00000027173	-	100	100.000	Rhinopithecus_bieti
ENSCSAG00000000102	-	100	100.000	ENSRROG00000017404	-	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000000102	-	98	69.388	ENSSHAG00000000511	-	59	69.388	Sarcophilus_harrisii
ENSCSAG00000000102	-	98	80.102	ENSSFOG00015002752	-	58	80.102	Scleropages_formosus
ENSCSAG00000000102	-	87	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSCSAG00000000102	-	98	80.102	ENSSFOG00015006662	pabpc1a	59	80.102	Scleropages_formosus
ENSCSAG00000000102	-	98	79.082	ENSSMAG00000006869	pabpc1b	59	79.082	Scophthalmus_maximus
ENSCSAG00000000102	-	98	80.102	ENSSMAG00000010803	pabpc1a	58	80.102	Scophthalmus_maximus
ENSCSAG00000000102	-	98	80.102	ENSSDUG00000006675	pabpc1a	58	80.102	Seriola_dumerili
ENSCSAG00000000102	-	98	79.592	ENSSDUG00000011965	pabpc1b	59	79.592	Seriola_dumerili
ENSCSAG00000000102	-	98	80.102	ENSSLDG00000011661	pabpc1a	58	80.102	Seriola_lalandi_dorsalis
ENSCSAG00000000102	-	98	79.592	ENSSLDG00000014156	pabpc1b	60	79.592	Seriola_lalandi_dorsalis
ENSCSAG00000000102	-	98	80.102	ENSSPAG00000014453	-	58	80.102	Stegastes_partitus
ENSCSAG00000000102	-	98	79.592	ENSSPAG00000019265	pabpc1b	65	79.592	Stegastes_partitus
ENSCSAG00000000102	-	100	99.500	ENSSSCG00000036336	-	100	99.500	Sus_scrofa
ENSCSAG00000000102	-	100	99.500	ENSSSCG00000032167	-	100	99.500	Sus_scrofa
ENSCSAG00000000102	-	98	80.102	ENSTRUG00000011577	-	58	80.102	Takifugu_rubripes
ENSCSAG00000000102	-	98	80.102	ENSTRUG00000003767	-	60	80.102	Takifugu_rubripes
ENSCSAG00000000102	-	98	80.612	ENSTNIG00000009153	pabpc1b	58	80.612	Tetraodon_nigroviridis
ENSCSAG00000000102	-	98	75.743	ENSTNIG00000013307	pabpc1a	58	75.743	Tetraodon_nigroviridis
ENSCSAG00000000102	-	100	99.500	ENSTTRG00000013181	-	100	99.500	Tursiops_truncatus
ENSCSAG00000000102	-	100	99.500	ENSUAMG00000008089	-	100	99.500	Ursus_americanus
ENSCSAG00000000102	-	99	57.868	ENSUMAG00000023926	-	88	57.360	Ursus_maritimus
ENSCSAG00000000102	-	100	99.500	ENSUMAG00000003364	-	100	99.500	Ursus_maritimus
ENSCSAG00000000102	-	100	99.000	ENSVVUG00000015892	-	97	99.000	Vulpes_vulpes
ENSCSAG00000000102	-	98	79.592	ENSXCOG00000019901	pabpc1b	60	79.592	Xiphophorus_couchianus
ENSCSAG00000000102	-	98	80.102	ENSXCOG00000017066	pabpc1a	61	80.102	Xiphophorus_couchianus
ENSCSAG00000000102	-	98	80.102	ENSXMAG00000002555	pabpc1a	60	80.102	Xiphophorus_maculatus
ENSCSAG00000000102	-	98	79.592	ENSXMAG00000003753	pabpc1b	89	79.592	Xiphophorus_maculatus