EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000000148 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 1119 bases
Position: chr20:74926856-74927974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000017844	RRM_1	PF00076.22	2.1e-31	1	2
ENSCSAP00000017844	RRM_1	PF00076.22	2.1e-31	2	2
ENSCSAP00000017844	HnRNPA1	PF11627.8	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000018387	-	1119	-	ENSCSAP00000017844	372 (aa)	-	A0A0D9SAF5

Gene Model

Click here to download ENSCSAG00000000148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000000148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000000148	-	53	76.531	ENSCSAG00000006389	-	54	79.235
ENSCSAG00000000148	-	100	69.086	ENSCSAG00000018870	-	73	81.466
ENSCSAG00000000148	-	89	68.882	ENSCSAG00000010220	-	75	81.897
ENSCSAG00000000148	-	51	70.370	ENSCSAG00000014175	HNRNPA2B1	51	72.626
ENSCSAG00000000148	-	53	77.041	ENSCSAG00000014399	-	54	79.781
ENSCSAG00000000148	-	51	89.947	ENSCSAG00000005436	-	51	89.947
ENSCSAG00000000148	-	62	33.043	ENSCSAG00000002626	-	72	34.158
ENSCSAG00000000148	-	100	71.774	ENSCSAG00000019724	-	59	83.598
ENSCSAG00000000148	-	65	36.100	ENSCSAG00000002265	MSI1	63	39.674
ENSCSAG00000000148	-	56	52.404	ENSCSAG00000000499	HNRNPA0	60	58.011
ENSCSAG00000000148	-	75	34.066	ENSCSAG00000004463	HNRNPD	50	39.560
ENSCSAG00000000148	-	95	70.000	ENSCSAG00000004770	-	87	75.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000000148	-	99	60.541	ENSCAFG00000030783	-	57	65.241	Canis_familiaris
ENSCSAG00000000148	-	66	57.831	ENSCAFG00000017424	-	78	66.667	Canis_familiaris
ENSCSAG00000000148	-	88	65.074	ENSDNOG00000036385	-	89	69.540	Dasypus_novemcinctus
ENSCSAG00000000148	-	59	73.214	ENSDNOG00000037420	-	81	79.070	Dasypus_novemcinctus
ENSCSAG00000000148	-	62	64.502	ENSDNOG00000039025	-	79	68.254	Dasypus_novemcinctus
ENSCSAG00000000148	-	82	75.000	ENSETEG00000007429	-	93	77.049	Echinops_telfairi
ENSCSAG00000000148	-	68	76.190	ENSETEG00000010614	-	86	75.610	Echinops_telfairi
ENSCSAG00000000148	-	80	75.806	ENSETEG00000013374	-	94	75.410	Echinops_telfairi
ENSCSAG00000000148	-	56	62.821	ENSETEG00000005266	-	86	65.000	Echinops_telfairi
ENSCSAG00000000148	-	62	90.741	ENSFDAG00000009166	-	59	65.909	Fukomys_damarensis
ENSCSAG00000000148	-	68	63.636	ENSMPUG00000000096	-	73	69.841	Mustela_putorius_furo
ENSCSAG00000000148	-	95	72.316	ENSNLEG00000034385	-	99	72.237	Nomascus_leucogenys
ENSCSAG00000000148	-	52	83.854	ENSNLEG00000029989	-	52	83.422	Nomascus_leucogenys
ENSCSAG00000000148	-	52	86.979	ENSOCUG00000022668	-	55	87.766	Oryctolagus_cuniculus
ENSCSAG00000000148	-	87	74.194	ENSOARG00000010092	-	76	75.000	Ovis_aries
ENSCSAG00000000148	-	99	61.685	ENSPPRG00000018110	-	63	87.861	Panthera_pardus
ENSCSAG00000000148	-	97	69.444	ENSPPYG00000004746	-	58	71.429	Pongo_abelii