EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000000211 (Gene tree)
Gene ID: 103214778
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chr3:86577304-86580039
Accession: 103214778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000017784	RNA_ligase	PF09414.10	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000018324	LIG4-201	2736	-	ENSCSAP00000017784	911 (aa)	XP_007959053	A0A0D9SA95

Gene Model

Click here to download ENSCSAG00000000211's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000000211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000000211	LIG4	100	97.256	ENSG00000174405	LIG4	100	97.393	Homo_sapiens
ENSCSAG00000000211	LIG4	99	64.868	ENSAPOG00000000866	lig4	99	65.088	Acanthochromis_polyacanthus
ENSCSAG00000000211	LIG4	100	89.243	ENSAMEG00000019685	LIG4	99	89.243	Ailuropoda_melanoleuca
ENSCSAG00000000211	LIG4	99	66.186	ENSACIG00000018309	lig4	98	66.408	Amphilophus_citrinellus
ENSCSAG00000000211	LIG4	99	64.978	ENSAOCG00000011768	lig4	99	65.198	Amphiprion_ocellaris
ENSCSAG00000000211	LIG4	99	65.088	ENSAPEG00000017815	lig4	99	65.308	Amphiprion_percula
ENSCSAG00000000211	LIG4	99	65.165	ENSATEG00000005583	lig4	99	65.275	Anabas_testudineus
ENSCSAG00000000211	LIG4	97	75.341	ENSAPLG00000001673	LIG4	99	75.341	Anas_platyrhynchos
ENSCSAG00000000211	LIG4	99	75.771	ENSACAG00000014566	LIG4	99	75.771	Anolis_carolinensis
ENSCSAG00000000211	LIG4	100	95.829	ENSANAG00000012446	LIG4	100	95.829	Aotus_nancymaae
ENSCSAG00000000211	LIG4	99	65.632	ENSACLG00000027051	lig4	98	65.632	Astatotilapia_calliptera
ENSCSAG00000000211	LIG4	99	64.751	ENSAMXG00000008192	lig4	93	64.751	Astyanax_mexicanus
ENSCSAG00000000211	LIG4	100	88.474	ENSBTAG00000015868	LIG4	100	88.474	Bos_taurus
ENSCSAG00000000211	LIG4	100	95.280	ENSCJAG00000014689	LIG4	100	95.280	Callithrix_jacchus
ENSCSAG00000000211	LIG4	100	90.450	ENSCAFG00000006031	LIG4	100	90.450	Canis_familiaris
ENSCSAG00000000211	LIG4	100	90.450	ENSCAFG00020021230	LIG4	100	90.450	Canis_lupus_dingo
ENSCSAG00000000211	LIG4	100	88.255	ENSCHIG00000001019	LIG4	100	88.255	Capra_hircus
ENSCSAG00000000211	LIG4	99	87.818	ENSCAPG00000006284	LIG4	99	87.818	Cavia_aperea
ENSCSAG00000000211	LIG4	100	87.706	ENSCPOG00000014266	LIG4	100	87.706	Cavia_porcellus
ENSCSAG00000000211	LIG4	100	95.060	ENSCCAG00000019971	LIG4	100	95.060	Cebus_capucinus
ENSCSAG00000000211	LIG4	100	99.232	ENSCATG00000021075	LIG4	100	99.232	Cercocebus_atys
ENSCSAG00000000211	LIG4	100	89.023	ENSCLAG00000003376	LIG4	100	89.023	Chinchilla_lanigera
ENSCSAG00000000211	LIG4	99	79.912	ENSCPBG00000023291	LIG4	100	79.412	Chrysemys_picta_bellii
ENSCSAG00000000211	LIG4	68	45.151	ENSCING00000009536	-	95	45.151	Ciona_intestinalis
ENSCSAG00000000211	LIG4	83	45.072	ENSCSAVG00000010336	-	98	45.072	Ciona_savignyi
ENSCSAG00000000211	LIG4	100	99.122	ENSCANG00000005805	LIG4	100	99.122	Colobus_angolensis_palliatus
ENSCSAG00000000211	LIG4	100	86.623	ENSCGRG00001012072	Lig4	100	86.623	Cricetulus_griseus_chok1gshd
ENSCSAG00000000211	LIG4	100	86.623	ENSCGRG00000013417	Lig4	100	86.623	Cricetulus_griseus_crigri
ENSCSAG00000000211	LIG4	97	66.931	ENSCSEG00000013905	lig4	95	66.931	Cynoglossus_semilaevis
ENSCSAG00000000211	LIG4	99	66.154	ENSCVAG00000007896	lig4	99	66.154	Cyprinodon_variegatus
ENSCSAG00000000211	LIG4	99	64.563	ENSDARG00000060620	lig4	98	64.563	Danio_rerio
ENSCSAG00000000211	LIG4	100	90.022	ENSDNOG00000000513	LIG4	100	90.022	Dasypus_novemcinctus
ENSCSAG00000000211	LIG4	100	89.243	ENSDORG00000027303	Lig4	100	89.243	Dipodomys_ordii
ENSCSAG00000000211	LIG4	89	31.213	FBgn0030506	Lig4	90	31.213	Drosophila_melanogaster
ENSCSAG00000000211	LIG4	99	84.590	ENSETEG00000015563	LIG4	100	84.922	Echinops_telfairi
ENSCSAG00000000211	LIG4	99	43.323	ENSEBUG00000014243	lig4	99	43.323	Eptatretus_burgeri
ENSCSAG00000000211	LIG4	100	91.328	ENSEASG00005022073	LIG4	100	91.328	Equus_asinus_asinus
ENSCSAG00000000211	LIG4	100	90.779	ENSECAG00000003257	LIG4	100	90.779	Equus_caballus
ENSCSAG00000000211	LIG4	99	66.814	ENSELUG00000006787	lig4	99	66.924	Esox_lucius
ENSCSAG00000000211	LIG4	100	89.791	ENSFCAG00000031985	LIG4	100	89.791	Felis_catus
ENSCSAG00000000211	LIG4	89	75.646	ENSFALG00000004214	LIG4	98	75.646	Ficedula_albicollis
ENSCSAG00000000211	LIG4	100	89.352	ENSFDAG00000008973	LIG4	100	89.352	Fukomys_damarensis
ENSCSAG00000000211	LIG4	99	65.116	ENSFHEG00000007398	lig4	89	65.116	Fundulus_heteroclitus
ENSCSAG00000000211	LIG4	85	64.313	ENSGMOG00000012843	lig4	99	64.313	Gadus_morhua
ENSCSAG00000000211	LIG4	100	75.000	ENSGALG00000016854	LIG4	100	75.000	Gallus_gallus
ENSCSAG00000000211	LIG4	99	65.590	ENSGAFG00000019779	lig4	95	65.495	Gambusia_affinis
ENSCSAG00000000211	LIG4	99	62.901	ENSGACG00000014135	lig4	99	63.123	Gasterosteus_aculeatus
ENSCSAG00000000211	LIG4	100	97.585	ENSGGOG00000027771	LIG4	100	97.585	Gorilla_gorilla
ENSCSAG00000000211	LIG4	99	65.410	ENSHBUG00000006245	lig4	98	65.410	Haplochromis_burtoni
ENSCSAG00000000211	LIG4	100	89.352	ENSHGLG00000000718	LIG4	100	89.352	Heterocephalus_glaber_female
ENSCSAG00000000211	LIG4	100	89.352	ENSHGLG00100003265	LIG4	100	89.352	Heterocephalus_glaber_male
ENSCSAG00000000211	LIG4	99	64.066	ENSHCOG00000012010	lig4	99	64.066	Hippocampus_comes
ENSCSAG00000000211	LIG4	100	64.885	ENSIPUG00000013748	lig4	100	64.885	Ictalurus_punctatus
ENSCSAG00000000211	LIG4	100	89.901	ENSSTOG00000024303	LIG4	100	89.901	Ictidomys_tridecemlineatus
ENSCSAG00000000211	LIG4	100	87.706	ENSJJAG00000006750	Lig4	100	87.706	Jaculus_jaculus
ENSCSAG00000000211	LIG4	99	65.116	ENSKMAG00000001149	lig4	99	65.116	Kryptolebias_marmoratus
ENSCSAG00000000211	LIG4	91	65.865	ENSLBEG00000014578	lig4	100	66.106	Labrus_bergylta
ENSCSAG00000000211	LIG4	99	72.456	ENSLACG00000003282	LIG4	99	72.456	Latimeria_chalumnae
ENSCSAG00000000211	LIG4	99	70.395	ENSLOCG00000008901	lig4	98	70.395	Lepisosteus_oculatus
ENSCSAG00000000211	LIG4	100	87.842	ENSLAFG00000031152	LIG4	100	87.842	Loxodonta_africana
ENSCSAG00000000211	LIG4	100	99.451	ENSMFAG00000037235	LIG4	100	99.451	Macaca_fascicularis
ENSCSAG00000000211	LIG4	100	99.451	ENSMMUG00000008874	LIG4	100	99.451	Macaca_mulatta
ENSCSAG00000000211	LIG4	100	99.451	ENSMNEG00000023575	LIG4	100	99.451	Macaca_nemestrina
ENSCSAG00000000211	LIG4	100	99.341	ENSMLEG00000026720	LIG4	100	99.341	Mandrillus_leucophaeus
ENSCSAG00000000211	LIG4	99	65.604	ENSMAMG00000008472	lig4	99	65.824	Mastacembelus_armatus
ENSCSAG00000000211	LIG4	99	65.632	ENSMZEG00005001855	lig4	98	65.632	Maylandia_zebra
ENSCSAG00000000211	LIG4	100	75.546	ENSMGAG00000015532	LIG4	100	75.546	Meleagris_gallopavo
ENSCSAG00000000211	LIG4	100	84.523	ENSMOCG00000019000	Lig4	100	84.523	Microtus_ochrogaster
ENSCSAG00000000211	LIG4	99	65.116	ENSMMOG00000004390	lig4	99	65.116	Mola_mola
ENSCSAG00000000211	LIG4	100	83.425	ENSMODG00000025064	LIG4	100	83.882	Monodelphis_domestica
ENSCSAG00000000211	LIG4	99	65.597	ENSMALG00000008555	lig4	99	65.597	Monopterus_albus
ENSCSAG00000000211	LIG4	100	86.498	MGP_CAROLIEiJ_G0030809	Lig4	100	86.498	Mus_caroli
ENSCSAG00000000211	LIG4	100	86.498	ENSMUSG00000049717	Lig4	100	86.498	Mus_musculus
ENSCSAG00000000211	LIG4	100	86.389	MGP_PahariEiJ_G0021270	Lig4	100	86.389	Mus_pahari
ENSCSAG00000000211	LIG4	100	86.498	MGP_SPRETEiJ_G0031917	Lig4	100	86.498	Mus_spretus
ENSCSAG00000000211	LIG4	100	88.474	ENSMPUG00000018675	LIG4	100	88.474	Mustela_putorius_furo
ENSCSAG00000000211	LIG4	100	90.889	ENSMLUG00000001267	LIG4	100	90.889	Myotis_lucifugus
ENSCSAG00000000211	LIG4	100	87.157	ENSNGAG00000013258	Lig4	100	87.157	Nannospalax_galili
ENSCSAG00000000211	LIG4	99	65.677	ENSNBRG00000021252	lig4	99	65.787	Neolamprologus_brichardi
ENSCSAG00000000211	LIG4	100	96.597	ENSNLEG00000007888	LIG4	100	96.597	Nomascus_leucogenys
ENSCSAG00000000211	LIG4	100	88.035	ENSOPRG00000005765	LIG4	100	88.035	Ochotona_princeps
ENSCSAG00000000211	LIG4	100	87.596	ENSODEG00000019683	LIG4	100	87.596	Octodon_degus
ENSCSAG00000000211	LIG4	99	65.559	ENSONIG00000011969	lig4	97	65.781	Oreochromis_niloticus
ENSCSAG00000000211	LIG4	100	90.999	ENSOCUG00000015734	LIG4	100	90.999	Oryctolagus_cuniculus
ENSCSAG00000000211	LIG4	99	64.066	ENSORLG00000004041	lig4	99	64.066	Oryzias_latipes
ENSCSAG00000000211	LIG4	99	64.505	ENSORLG00020019607	lig4	99	64.505	Oryzias_latipes_hni
ENSCSAG00000000211	LIG4	99	64.176	ENSORLG00015017754	lig4	99	64.176	Oryzias_latipes_hsok
ENSCSAG00000000211	LIG4	75	69.853	ENSOMEG00000003459	lig4	99	69.853	Oryzias_melastigma
ENSCSAG00000000211	LIG4	100	91.886	ENSOGAG00000032120	LIG4	99	91.886	Otolemur_garnettii
ENSCSAG00000000211	LIG4	82	90.067	ENSOARG00000005590	LIG4	98	90.067	Ovis_aries
ENSCSAG00000000211	LIG4	100	96.817	ENSPPAG00000032998	LIG4	100	96.817	Pan_paniscus
ENSCSAG00000000211	LIG4	100	90.121	ENSPPRG00000017804	LIG4	100	90.121	Panthera_pardus
ENSCSAG00000000211	LIG4	100	90.011	ENSPTIG00000010051	LIG4	100	90.011	Panthera_tigris_altaica
ENSCSAG00000000211	LIG4	100	96.926	ENSPTRG00000006025	LIG4	100	96.926	Pan_troglodytes
ENSCSAG00000000211	LIG4	100	99.341	ENSPANG00000007562	LIG4	100	99.341	Papio_anubis
ENSCSAG00000000211	LIG4	99	66.484	ENSPKIG00000011645	lig4	98	66.484	Paramormyrops_kingsleyae
ENSCSAG00000000211	LIG4	100	79.367	ENSPSIG00000001504	LIG4	100	79.367	Pelodiscus_sinensis
ENSCSAG00000000211	LIG4	99	63.444	ENSPMGG00000013486	lig4	99	63.008	Periophthalmus_magnuspinnatus
ENSCSAG00000000211	LIG4	100	86.842	ENSPEMG00000000076	Lig4	100	86.842	Peromyscus_maniculatus_bairdii
ENSCSAG00000000211	LIG4	100	83.662	ENSPCIG00000021882	LIG4	100	83.662	Phascolarctos_cinereus
ENSCSAG00000000211	LIG4	99	65.740	ENSPFOG00000000797	lig4	99	65.495	Poecilia_formosa
ENSCSAG00000000211	LIG4	99	65.628	ENSPLAG00000001196	lig4	99	65.385	Poecilia_latipinna
ENSCSAG00000000211	LIG4	99	65.740	ENSPMEG00000021353	lig4	99	65.604	Poecilia_mexicana
ENSCSAG00000000211	LIG4	99	65.517	ENSPREG00000007323	lig4	99	65.165	Poecilia_reticulata
ENSCSAG00000000211	LIG4	100	97.475	ENSPPYG00000005540	LIG4	100	97.475	Pongo_abelii
ENSCSAG00000000211	LIG4	100	90.889	ENSPVAG00000016403	LIG4	100	90.889	Pteropus_vampyrus
ENSCSAG00000000211	LIG4	99	65.521	ENSPNYG00000009660	lig4	98	65.521	Pundamilia_nyererei
ENSCSAG00000000211	LIG4	100	64.732	ENSPNAG00000028069	LIG4	100	64.732	Pygocentrus_nattereri
ENSCSAG00000000211	LIG4	100	64.732	ENSPNAG00000028056	lig4	100	64.732	Pygocentrus_nattereri
ENSCSAG00000000211	LIG4	100	85.291	ENSRNOG00000014605	Lig4	100	85.291	Rattus_norvegicus
ENSCSAG00000000211	LIG4	100	97.585	ENSRBIG00000039962	LIG4	100	97.585	Rhinopithecus_bieti
ENSCSAG00000000211	LIG4	100	98.573	ENSRROG00000006040	LIG4	100	98.573	Rhinopithecus_roxellana
ENSCSAG00000000211	LIG4	100	94.731	ENSSBOG00000019029	LIG4	100	94.731	Saimiri_boliviensis_boliviensis
ENSCSAG00000000211	LIG4	100	80.132	ENSSHAG00000009525	LIG4	100	80.702	Sarcophilus_harrisii
ENSCSAG00000000211	LIG4	100	65.830	ENSSFOG00015012835	lig4	100	65.830	Scleropages_formosus
ENSCSAG00000000211	LIG4	99	63.344	ENSSMAG00000011267	lig4	99	63.344	Scophthalmus_maximus
ENSCSAG00000000211	LIG4	99	66.519	ENSSDUG00000010343	lig4	98	66.519	Seriola_dumerili
ENSCSAG00000000211	LIG4	99	64.673	ENSSLDG00000003239	lig4	99	64.673	Seriola_lalandi_dorsalis
ENSCSAG00000000211	LIG4	100	83.260	ENSSARG00000006573	LIG4	100	83.260	Sorex_araneus
ENSCSAG00000000211	LIG4	93	78.199	ENSSPUG00000002444	LIG4	100	78.199	Sphenodon_punctatus
ENSCSAG00000000211	LIG4	99	65.132	ENSSPAG00000001609	lig4	99	65.132	Stegastes_partitus
ENSCSAG00000000211	LIG4	100	88.364	ENSSSCG00000009540	LIG4	100	88.364	Sus_scrofa
ENSCSAG00000000211	LIG4	99	74.835	ENSTGUG00000010795	LIG4	100	74.835	Taeniopygia_guttata
ENSCSAG00000000211	LIG4	99	65.495	ENSTRUG00000009984	lig4	99	65.495	Takifugu_rubripes
ENSCSAG00000000211	LIG4	99	65.449	ENSTNIG00000010348	lig4	99	65.670	Tetraodon_nigroviridis
ENSCSAG00000000211	LIG4	100	90.999	ENSTBEG00000017741	LIG4	100	90.999	Tupaia_belangeri
ENSCSAG00000000211	LIG4	100	89.243	ENSTTRG00000012660	LIG4	100	89.243	Tursiops_truncatus
ENSCSAG00000000211	LIG4	100	89.352	ENSUAMG00000003773	LIG4	100	89.352	Ursus_americanus
ENSCSAG00000000211	LIG4	99	72.357	ENSXETG00000002654	lig4	99	72.357	Xenopus_tropicalis
ENSCSAG00000000211	LIG4	99	65.517	ENSXCOG00000017401	lig4	99	65.055	Xiphophorus_couchianus
ENSCSAG00000000211	LIG4	99	65.778	ENSXMAG00000015142	lig4	99	65.313	Xiphophorus_maculatus