EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000000841 (Gene tree)
Gene ID: 103225538
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 97057 bases
Position: chr20:116361008-116458064
Accession: 103225538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000017165	RRM_5	PF13893.6	1.9e-07	1	2
ENSCSAP00000017165	RRM_5	PF13893.6	1.9e-07	2	2
ENSCSAP00000017165	RRM_1	PF00076.22	9.1e-44	1	4
ENSCSAP00000017165	RRM_1	PF00076.22	9.1e-44	2	4
ENSCSAP00000017165	RRM_1	PF00076.22	9.1e-44	3	4
ENSCSAP00000017165	RRM_1	PF00076.22	9.1e-44	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000017692	SPEN-201	11290	XM_007980411	ENSCSAP00000017165	3670 (aa)	XP_007978602	A0A0D9S8H6

Gene Model

Click here to download ENSCSAG00000000841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000000841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000000841	SPEN	100	97.441	ENSG00000065526	SPEN	99	99.663	Homo_sapiens
ENSCSAG00000000841	SPEN	79	83.626	ENSAPOG00000011411	si:ch1073-335m2.2	87	83.626	Acanthochromis_polyacanthus
ENSCSAG00000000841	SPEN	82	81.461	ENSAPOG00000009853	-	90	75.094	Acanthochromis_polyacanthus
ENSCSAG00000000841	SPEN	100	87.696	ENSAMEG00000011817	SPEN	100	88.025	Ailuropoda_melanoleuca
ENSCSAG00000000841	SPEN	68	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	84	77.778	Amphiprion_ocellaris
ENSCSAG00000000841	SPEN	81	81.461	ENSAOCG00000014505	-	89	49.918	Amphiprion_ocellaris
ENSCSAG00000000841	SPEN	74	83.626	ENSAPEG00000013515	si:ch1073-335m2.2	84	83.626	Amphiprion_percula
ENSCSAG00000000841	SPEN	82	81.461	ENSAPEG00000010288	-	89	49.979	Amphiprion_percula
ENSCSAG00000000841	SPEN	78	84.615	ENSATEG00000007674	si:ch1073-335m2.2	87	84.615	Anabas_testudineus
ENSCSAG00000000841	SPEN	96	82.584	ENSATEG00000005627	-	90	49.857	Anabas_testudineus
ENSCSAG00000000841	SPEN	72	71.742	ENSAPLG00000012618	SPEN	75	71.631	Anas_platyrhynchos
ENSCSAG00000000841	SPEN	96	63.516	ENSACAG00000013761	SPEN	100	63.557	Anolis_carolinensis
ENSCSAG00000000841	SPEN	99	94.937	ENSANAG00000034428	SPEN	99	95.128	Aotus_nancymaae
ENSCSAG00000000841	SPEN	76	84.211	ENSACLG00000021433	si:ch1073-335m2.2	88	84.211	Astatotilapia_calliptera
ENSCSAG00000000841	SPEN	86	83.240	ENSAMXG00000012485	spen	89	82.065	Astyanax_mexicanus
ENSCSAG00000000841	SPEN	100	87.117	ENSBTAG00000018729	SPEN	100	87.232	Bos_taurus
ENSCSAG00000000841	SPEN	100	94.444	ENSCJAG00000008527	SPEN	100	94.715	Callithrix_jacchus
ENSCSAG00000000841	SPEN	88	86.067	ENSCAFG00000016132	-	97	92.529	Canis_familiaris
ENSCSAG00000000841	SPEN	100	87.144	ENSCHIG00000025070	SPEN	100	87.259	Capra_hircus
ENSCSAG00000000841	SPEN	92	89.318	ENSTSYG00000036016	SPEN	99	89.344	Carlito_syrichta
ENSCSAG00000000841	SPEN	99	81.764	ENSCAPG00000013803	SPEN	100	81.644	Cavia_aperea
ENSCSAG00000000841	SPEN	99	81.614	ENSCPOG00000014036	SPEN	100	82.052	Cavia_porcellus
ENSCSAG00000000841	SPEN	100	90.334	ENSCCAG00000020258	SPEN	99	94.514	Cebus_capucinus
ENSCSAG00000000841	SPEN	100	99.265	ENSCATG00000015079	SPEN	100	99.265	Cercocebus_atys
ENSCSAG00000000841	SPEN	99	97.080	ENSCANG00000034547	SPEN	99	97.080	Colobus_angolensis_palliatus
ENSCSAG00000000841	SPEN	99	81.724	ENSCGRG00001007725	Spen	100	81.892	Cricetulus_griseus_chok1gshd
ENSCSAG00000000841	SPEN	99	80.738	ENSCGRG00000010581	Spen	100	80.716	Cricetulus_griseus_crigri
ENSCSAG00000000841	SPEN	68	84.270	ENSCSEG00000003915	-	90	48.576	Cynoglossus_semilaevis
ENSCSAG00000000841	SPEN	53	84.795	ENSCVAG00000009075	si:ch1073-335m2.2	85	84.795	Cyprinodon_variegatus
ENSCSAG00000000841	SPEN	96	45.063	ENSCVAG00000016346	-	90	48.492	Cyprinodon_variegatus
ENSCSAG00000000841	SPEN	94	66.270	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSCSAG00000000841	SPEN	73	63.454	ENSDARG00000074332	si:ch1073-335m2.2	87	63.454	Danio_rerio
ENSCSAG00000000841	SPEN	100	86.993	ENSDNOG00000041948	SPEN	100	87.108	Dasypus_novemcinctus
ENSCSAG00000000841	SPEN	99	78.291	ENSDORG00000023909	Spen	99	80.300	Dipodomys_ordii
ENSCSAG00000000841	SPEN	68	97.059	ENSETEG00000016692	-	67	97.059	Echinops_telfairi
ENSCSAG00000000841	SPEN	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSCSAG00000000841	SPEN	95	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSCSAG00000000841	SPEN	71	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSCSAG00000000841	SPEN	60	81.111	ENSELUG00000007726	si:ch1073-335m2.2	78	81.111	Esox_lucius
ENSCSAG00000000841	SPEN	99	82.850	ENSFDAG00000010212	SPEN	100	82.777	Fukomys_damarensis
ENSCSAG00000000841	SPEN	78	76.617	ENSGMOG00000008397	-	83	76.617	Gadus_morhua
ENSCSAG00000000841	SPEN	85	80.447	ENSGMOG00000008156	si:ch1073-335m2.2	88	80.447	Gadus_morhua
ENSCSAG00000000841	SPEN	77	84.024	ENSGAFG00000021570	si:ch1073-335m2.2	86	84.024	Gambusia_affinis
ENSCSAG00000000841	SPEN	96	44.317	ENSGAFG00000015819	-	90	74.340	Gambusia_affinis
ENSCSAG00000000841	SPEN	74	81.176	ENSGACG00000001176	si:ch1073-335m2.2	81	81.176	Gasterosteus_aculeatus
ENSCSAG00000000841	SPEN	97	47.547	ENSGACG00000005341	-	100	47.215	Gasterosteus_aculeatus
ENSCSAG00000000841	SPEN	97	97.456	ENSGAGG00000020785	SPEN	100	72.932	Gopherus_agassizii
ENSCSAG00000000841	SPEN	100	97.303	ENSGGOG00000012041	SPEN	100	97.303	Gorilla_gorilla
ENSCSAG00000000841	SPEN	79	84.211	ENSHBUG00000023253	si:ch1073-335m2.2	88	84.211	Haplochromis_burtoni
ENSCSAG00000000841	SPEN	100	82.115	ENSHGLG00000019259	SPEN	100	82.184	Heterocephalus_glaber_female
ENSCSAG00000000841	SPEN	88	86.615	ENSHGLG00100019294	SPEN	95	86.615	Heterocephalus_glaber_male
ENSCSAG00000000841	SPEN	55	81.250	ENSHCOG00000006004	si:ch1073-335m2.2	64	61.616	Hippocampus_comes
ENSCSAG00000000841	SPEN	77	77.273	ENSIPUG00000018212	si:ch1073-335m2.2	80	77.273	Ictalurus_punctatus
ENSCSAG00000000841	SPEN	96	82.778	ENSIPUG00000021668	spen	88	81.967	Ictalurus_punctatus
ENSCSAG00000000841	SPEN	99	86.689	ENSSTOG00000021428	SPEN	100	87.206	Ictidomys_tridecemlineatus
ENSCSAG00000000841	SPEN	100	83.761	ENSJJAG00000010882	Spen	100	83.788	Jaculus_jaculus
ENSCSAG00000000841	SPEN	76	83.041	ENSKMAG00000021725	si:ch1073-335m2.2	84	83.041	Kryptolebias_marmoratus
ENSCSAG00000000841	SPEN	83	40.328	ENSLBEG00000019129	-	80	69.397	Labrus_bergylta
ENSCSAG00000000841	SPEN	73	72.500	ENSLBEG00000020855	si:ch1073-335m2.2	82	72.500	Labrus_bergylta
ENSCSAG00000000841	SPEN	83	81.863	ENSLACG00000003258	SPEN	90	81.863	Latimeria_chalumnae
ENSCSAG00000000841	SPEN	97	53.879	ENSLOCG00000007896	si:ch1073-335m2.2	99	54.477	Lepisosteus_oculatus
ENSCSAG00000000841	SPEN	99	87.374	ENSLAFG00000004524	SPEN	100	87.347	Loxodonta_africana
ENSCSAG00000000841	SPEN	100	99.183	ENSMFAG00000041974	SPEN	100	99.183	Macaca_fascicularis
ENSCSAG00000000841	SPEN	100	99.210	ENSMMUG00000008026	SPEN	100	99.210	Macaca_mulatta
ENSCSAG00000000841	SPEN	100	99.238	ENSMNEG00000042402	SPEN	100	99.238	Macaca_nemestrina
ENSCSAG00000000841	SPEN	100	98.802	ENSMLEG00000039293	SPEN	99	98.802	Mandrillus_leucophaeus
ENSCSAG00000000841	SPEN	76	83.832	ENSMAMG00000023870	si:ch1073-335m2.2	85	68.182	Mastacembelus_armatus
ENSCSAG00000000841	SPEN	76	84.211	ENSMZEG00005011762	si:ch1073-335m2.2	87	84.211	Maylandia_zebra
ENSCSAG00000000841	SPEN	98	83.724	ENSMAUG00000008318	Spen	99	83.682	Mesocricetus_auratus
ENSCSAG00000000841	SPEN	100	90.111	ENSMICG00000030994	SPEN	100	90.084	Microcebus_murinus
ENSCSAG00000000841	SPEN	100	81.621	ENSMOCG00000016083	Spen	100	82.082	Microtus_ochrogaster
ENSCSAG00000000841	SPEN	50	80.447	ENSMMOG00000021742	si:ch1073-335m2.2	58	80.447	Mola_mola
ENSCSAG00000000841	SPEN	97	71.145	ENSMODG00000003411	SPEN	100	71.035	Monodelphis_domestica
ENSCSAG00000000841	SPEN	97	82.022	ENSMALG00000008625	-	90	49.131	Monopterus_albus
ENSCSAG00000000841	SPEN	100	80.657	MGP_CAROLIEiJ_G0026745	Spen	100	81.038	Mus_caroli
ENSCSAG00000000841	SPEN	100	80.109	ENSMUSG00000040761	Spen	100	80.488	Mus_musculus
ENSCSAG00000000841	SPEN	100	79.892	MGP_PahariEiJ_G0029076	Spen	100	80.277	Mus_pahari
ENSCSAG00000000841	SPEN	100	80.336	MGP_SPRETEiJ_G0027724	Spen	100	80.608	Mus_spretus
ENSCSAG00000000841	SPEN	98	87.180	ENSMPUG00000016317	SPEN	100	87.817	Mustela_putorius_furo
ENSCSAG00000000841	SPEN	94	86.560	ENSMLUG00000010144	SPEN	99	93.939	Myotis_lucifugus
ENSCSAG00000000841	SPEN	100	80.038	ENSNGAG00000000641	Spen	95	86.284	Nannospalax_galili
ENSCSAG00000000841	SPEN	81	67.742	ENSNBRG00000022090	-	81	67.742	Neolamprologus_brichardi
ENSCSAG00000000841	SPEN	72	84.211	ENSNBRG00000005733	si:ch1073-335m2.2	86	84.211	Neolamprologus_brichardi
ENSCSAG00000000841	SPEN	99	97.560	ENSNLEG00000007652	SPEN	99	97.560	Nomascus_leucogenys
ENSCSAG00000000841	SPEN	87	93.750	ENSMEUG00000002422	SPEN	91	93.750	Notamacropus_eugenii
ENSCSAG00000000841	SPEN	93	90.441	ENSOPRG00000015800	SPEN	93	90.441	Ochotona_princeps
ENSCSAG00000000841	SPEN	99	83.239	ENSOCUG00000010840	SPEN	99	83.158	Oryctolagus_cuniculus
ENSCSAG00000000841	SPEN	82	77.157	ENSORLG00020007735	-	85	77.157	Oryzias_latipes_hni
ENSCSAG00000000841	SPEN	65	77.157	ENSORLG00015022085	-	68	77.157	Oryzias_latipes_hsok
ENSCSAG00000000841	SPEN	70	66.316	ENSORLG00015005537	si:ch1073-335m2.2	86	64.706	Oryzias_latipes_hsok
ENSCSAG00000000841	SPEN	71	68.349	ENSOMEG00000004509	si:ch1073-335m2.2	90	67.544	Oryzias_melastigma
ENSCSAG00000000841	SPEN	89	76.617	ENSOMEG00000007639	-	72	76.617	Oryzias_melastigma
ENSCSAG00000000841	SPEN	100	89.538	ENSOGAG00000025110	SPEN	100	89.511	Otolemur_garnettii
ENSCSAG00000000841	SPEN	99	86.448	ENSOARG00000008477	SPEN	99	86.455	Ovis_aries
ENSCSAG00000000841	SPEN	99	97.476	ENSPPAG00000035690	SPEN	100	97.476	Pan_paniscus
ENSCSAG00000000841	SPEN	100	97.468	ENSPTRG00000000210	SPEN	100	97.468	Pan_troglodytes
ENSCSAG00000000841	SPEN	100	97.849	ENSPANG00000006293	SPEN	100	97.849	Papio_anubis
ENSCSAG00000000841	SPEN	94	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	98	85.083	Paramormyrops_kingsleyae
ENSCSAG00000000841	SPEN	86	86.111	ENSPKIG00000002617	SPEN	87	86.111	Paramormyrops_kingsleyae
ENSCSAG00000000841	SPEN	99	81.938	ENSPEMG00000022997	Spen	100	81.965	Peromyscus_maniculatus_bairdii
ENSCSAG00000000841	SPEN	59	85.207	ENSPFOG00000017986	si:ch1073-335m2.2	85	85.207	Poecilia_formosa
ENSCSAG00000000841	SPEN	68	85.207	ENSPLAG00000016625	si:ch1073-335m2.2	85	85.207	Poecilia_latipinna
ENSCSAG00000000841	SPEN	96	44.554	ENSPMEG00000006764	-	90	74.340	Poecilia_mexicana
ENSCSAG00000000841	SPEN	59	85.207	ENSPMEG00000002674	si:ch1073-335m2.2	85	85.207	Poecilia_mexicana
ENSCSAG00000000841	SPEN	76	85.207	ENSPREG00000005357	si:ch1073-335m2.2	85	85.207	Poecilia_reticulata
ENSCSAG00000000841	SPEN	96	44.677	ENSPREG00000010399	-	90	74.717	Poecilia_reticulata
ENSCSAG00000000841	SPEN	100	97.630	ENSPPYG00000001834	SPEN	100	97.630	Pongo_abelii
ENSCSAG00000000841	SPEN	88	92.171	ENSPCAG00000009543	SPEN	92	87.651	Procavia_capensis
ENSCSAG00000000841	SPEN	100	89.411	ENSPCOG00000021735	SPEN	100	89.547	Propithecus_coquereli
ENSCSAG00000000841	SPEN	84	95.574	ENSPVAG00000013794	SPEN	84	95.601	Pteropus_vampyrus
ENSCSAG00000000841	SPEN	76	84.211	ENSPNYG00000009042	si:ch1073-335m2.2	88	84.211	Pundamilia_nyererei
ENSCSAG00000000841	SPEN	96	84.181	ENSPNAG00000020795	spen	89	82.967	Pygocentrus_nattereri
ENSCSAG00000000841	SPEN	78	61.811	ENSPNAG00000011452	si:ch1073-335m2.2	86	61.811	Pygocentrus_nattereri
ENSCSAG00000000841	SPEN	99	80.723	ENSRNOG00000033556	Spen	100	80.778	Rattus_norvegicus
ENSCSAG00000000841	SPEN	99	97.996	ENSRBIG00000039654	SPEN	100	97.996	Rhinopithecus_bieti
ENSCSAG00000000841	SPEN	99	98.574	ENSRROG00000035686	SPEN	100	98.585	Rhinopithecus_roxellana
ENSCSAG00000000841	SPEN	88	94.724	ENSSBOG00000028770	SPEN	91	95.299	Saimiri_boliviensis_boliviensis
ENSCSAG00000000841	SPEN	72	71.332	ENSSHAG00000004960	SPEN	99	93.182	Sarcophilus_harrisii
ENSCSAG00000000841	SPEN	92	84.211	ENSSFOG00015010267	si:ch1073-335m2.2	88	84.211	Scleropages_formosus
ENSCSAG00000000841	SPEN	80	73.558	ENSSMAG00000000125	si:ch1073-335m2.2	88	73.558	Scophthalmus_maximus
ENSCSAG00000000841	SPEN	96	82.022	ENSSMAG00000008996	-	89	49.116	Scophthalmus_maximus
ENSCSAG00000000841	SPEN	86	82.584	ENSSDUG00000003476	-	90	76.030	Seriola_dumerili
ENSCSAG00000000841	SPEN	78	75.124	ENSSDUG00000008416	si:ch1073-335m2.2	86	75.124	Seriola_dumerili
ENSCSAG00000000841	SPEN	75	74.627	ENSSLDG00000023347	si:ch1073-335m2.2	84	74.627	Seriola_lalandi_dorsalis
ENSCSAG00000000841	SPEN	97	82.584	ENSSLDG00000012950	-	90	76.030	Seriola_lalandi_dorsalis
ENSCSAG00000000841	SPEN	86	66.580	ENSSPUG00000001866	-	100	66.262	Sphenodon_punctatus
ENSCSAG00000000841	SPEN	86	81.461	ENSSPAG00000006014	-	90	75.472	Stegastes_partitus
ENSCSAG00000000841	SPEN	77	84.211	ENSSPAG00000012454	si:ch1073-335m2.2	85	84.211	Stegastes_partitus
ENSCSAG00000000841	SPEN	85	87.878	ENSSSCG00000034484	SPEN	99	87.910	Sus_scrofa
ENSCSAG00000000841	SPEN	87	47.439	ENSTRUG00000024350	-	90	47.985	Takifugu_rubripes
ENSCSAG00000000841	SPEN	86	82.456	ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	Tetraodon_nigroviridis
ENSCSAG00000000841	SPEN	82	77.435	ENSTNIG00000010907	-	90	77.682	Tetraodon_nigroviridis
ENSCSAG00000000841	SPEN	77	94.860	ENSTBEG00000003628	SPEN	77	94.860	Tupaia_belangeri
ENSCSAG00000000841	SPEN	79	95.349	ENSTTRG00000015704	SPEN	79	95.349	Tursiops_truncatus
ENSCSAG00000000841	SPEN	100	88.242	ENSUAMG00000009600	SPEN	100	88.516	Ursus_americanus
ENSCSAG00000000841	SPEN	100	86.860	ENSUMAG00000021641	SPEN	100	87.080	Ursus_maritimus
ENSCSAG00000000841	SPEN	95	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSCSAG00000000841	SPEN	97	56.531	ENSXETG00000023114	SPEN	99	55.822	Xenopus_tropicalis
ENSCSAG00000000841	SPEN	65	84.024	ENSXCOG00000004516	si:ch1073-335m2.2	74	84.024	Xiphophorus_couchianus
ENSCSAG00000000841	SPEN	69	84.024	ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	Xiphophorus_maculatus
ENSCSAG00000000841	SPEN	96	44.444	ENSXMAG00000021384	-	90	72.453	Xiphophorus_maculatus