EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000001028 (Gene tree)
Gene ID: 103225232
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 136560 bases
Position: chr20:101773960-101910519
Accession: 103225232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	1	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	2	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	3	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	4	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	5	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	6	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	7	8
ENSCSAP00000016984	PUF	PF00806.19	3.1e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000017505	PUM1-201	5549	XM_007979672	ENSCSAP00000016984	1200 (aa)	XP_007977863	A0A0D9S7Z5

Gene Model

Click here to download ENSCSAG00000001028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000001028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000001028	PUM1	89	75.529	ENSCSAG00000008087	PUM2	100	76.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000001028	PUM1	100	99.083	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSCSAG00000001028	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	77.606	Acanthochromis_polyacanthus
ENSCSAG00000001028	PUM1	100	98.501	ENSAMEG00000017656	PUM1	97	98.501	Ailuropoda_melanoleuca
ENSCSAG00000001028	PUM1	100	73.663	ENSACIG00000021013	pum1	100	75.492	Amphilophus_citrinellus
ENSCSAG00000001028	PUM1	90	88.506	ENSAOCG00000003944	pum1	100	77.606	Amphiprion_ocellaris
ENSCSAG00000001028	PUM1	90	88.506	ENSAPEG00000014550	pum1	100	77.606	Amphiprion_percula
ENSCSAG00000001028	PUM1	90	88.506	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSCSAG00000001028	PUM1	100	96.833	ENSAPLG00000009351	PUM1	100	96.833	Anas_platyrhynchos
ENSCSAG00000001028	PUM1	100	94.500	ENSACAG00000000682	PUM1	98	94.333	Anolis_carolinensis
ENSCSAG00000001028	PUM1	100	98.667	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSCSAG00000001028	PUM1	90	75.527	ENSACLG00000019354	pum1	100	77.768	Astatotilapia_calliptera
ENSCSAG00000001028	PUM1	100	77.152	ENSAMXG00000020607	pum1	96	78.063	Astyanax_mexicanus
ENSCSAG00000001028	PUM1	100	98.417	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSCSAG00000001028	PUM1	100	98.833	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSCSAG00000001028	PUM1	100	96.333	ENSCAFG00000011205	PUM1	100	96.333	Canis_familiaris
ENSCSAG00000001028	PUM1	92	96.396	ENSCAFG00020024616	PUM1	98	99.275	Canis_lupus_dingo
ENSCSAG00000001028	PUM1	100	98.417	ENSCHIG00000012952	PUM1	100	99.275	Capra_hircus
ENSCSAG00000001028	PUM1	100	98.750	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSCSAG00000001028	PUM1	100	98.417	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSCSAG00000001028	PUM1	100	96.750	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSCSAG00000001028	PUM1	100	98.500	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSCSAG00000001028	PUM1	93	94.908	ENSCHOG00000010245	PUM1	93	94.908	Choloepus_hoffmanni
ENSCSAG00000001028	PUM1	100	96.750	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSCSAG00000001028	PUM1	100	99.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSCSAG00000001028	PUM1	100	97.833	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSCSAG00000001028	PUM1	100	97.833	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSCSAG00000001028	PUM1	90	75.619	ENSCSEG00000015981	pum1	100	77.289	Cynoglossus_semilaevis
ENSCSAG00000001028	PUM1	100	72.869	ENSCVAG00000007043	pum1	100	74.714	Cyprinodon_variegatus
ENSCSAG00000001028	PUM1	100	78.228	ENSDARG00000099256	pum1	100	78.477	Danio_rerio
ENSCSAG00000001028	PUM1	100	98.333	ENSDNOG00000010939	PUM1	100	98.333	Dasypus_novemcinctus
ENSCSAG00000001028	PUM1	85	99.034	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSCSAG00000001028	PUM1	88	92.857	ENSETEG00000004355	PUM1	87	92.857	Echinops_telfairi
ENSCSAG00000001028	PUM1	100	98.250	ENSEASG00005010813	PUM1	100	98.250	Equus_asinus_asinus
ENSCSAG00000001028	PUM1	100	98.250	ENSECAG00000021369	PUM1	100	98.250	Equus_caballus
ENSCSAG00000001028	PUM1	77	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSCSAG00000001028	PUM1	100	75.224	ENSELUG00000002409	pum1	100	81.829	Esox_lucius
ENSCSAG00000001028	PUM1	100	98.750	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSCSAG00000001028	PUM1	100	93.942	ENSFALG00000001214	PUM1	97	93.776	Ficedula_albicollis
ENSCSAG00000001028	PUM1	100	98.417	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSCSAG00000001028	PUM1	100	97.000	ENSGALG00000042598	PUM1	99	98.785	Gallus_gallus
ENSCSAG00000001028	PUM1	90	87.816	ENSGAFG00000015617	pum1	100	81.684	Gambusia_affinis
ENSCSAG00000001028	PUM1	100	73.835	ENSGACG00000005717	pum1	100	75.429	Gasterosteus_aculeatus
ENSCSAG00000001028	PUM1	100	96.583	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSCSAG00000001028	PUM1	100	99.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSCSAG00000001028	PUM1	100	73.361	ENSHBUG00000018718	pum1	100	75.286	Haplochromis_burtoni
ENSCSAG00000001028	PUM1	100	98.250	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSCSAG00000001028	PUM1	100	98.250	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSCSAG00000001028	PUM1	100	75.700	ENSIPUG00000020421	pum1	100	76.955	Ictalurus_punctatus
ENSCSAG00000001028	PUM1	100	98.583	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSCSAG00000001028	PUM1	100	98.167	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSCSAG00000001028	PUM1	100	73.033	ENSKMAG00000003481	pum1	100	74.877	Kryptolebias_marmoratus
ENSCSAG00000001028	PUM1	100	72.742	ENSLBEG00000002527	pum1	100	74.754	Labrus_bergylta
ENSCSAG00000001028	PUM1	100	85.479	ENSLACG00000017188	PUM1	99	85.396	Latimeria_chalumnae
ENSCSAG00000001028	PUM1	100	87.262	ENSLOCG00000005210	pum1	99	87.262	Lepisosteus_oculatus
ENSCSAG00000001028	PUM1	100	98.083	ENSLAFG00000003178	PUM1	100	98.083	Loxodonta_africana
ENSCSAG00000001028	PUM1	100	98.754	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSCSAG00000001028	PUM1	100	98.754	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSCSAG00000001028	PUM1	100	99.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSCSAG00000001028	PUM1	100	99.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSCSAG00000001028	PUM1	100	73.443	ENSMAMG00000011606	pum1	100	75.368	Mastacembelus_armatus
ENSCSAG00000001028	PUM1	100	73.361	ENSMZEG00005005834	pum1	100	75.286	Maylandia_zebra
ENSCSAG00000001028	PUM1	100	96.750	ENSMGAG00000000724	PUM1	100	96.750	Meleagris_gallopavo
ENSCSAG00000001028	PUM1	100	98.167	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSCSAG00000001028	PUM1	100	98.750	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSCSAG00000001028	PUM1	99	96.578	ENSMICG00000012213	-	100	95.894	Microcebus_murinus
ENSCSAG00000001028	PUM1	100	98.083	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSCSAG00000001028	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSCSAG00000001028	PUM1	100	96.922	ENSMODG00000017067	PUM1	100	96.922	Monodelphis_domestica
ENSCSAG00000001028	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSCSAG00000001028	PUM1	100	97.833	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSCSAG00000001028	PUM1	100	98.083	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSCSAG00000001028	PUM1	100	97.917	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSCSAG00000001028	PUM1	100	98.000	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSCSAG00000001028	PUM1	100	98.333	ENSMPUG00000015454	PUM1	100	98.333	Mustela_putorius_furo
ENSCSAG00000001028	PUM1	100	98.333	ENSMLUG00000006490	PUM1	100	98.333	Myotis_lucifugus
ENSCSAG00000001028	PUM1	100	98.417	ENSNGAG00000002378	Pum1	100	98.611	Nannospalax_galili
ENSCSAG00000001028	PUM1	80	79.512	ENSNBRG00000010689	pum1	100	81.752	Neolamprologus_brichardi
ENSCSAG00000001028	PUM1	100	97.583	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSCSAG00000001028	PUM1	84	96.959	ENSMEUG00000000976	-	82	96.959	Notamacropus_eugenii
ENSCSAG00000001028	PUM1	83	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSCSAG00000001028	PUM1	100	98.250	ENSODEG00000003465	PUM1	100	98.611	Octodon_degus
ENSCSAG00000001028	PUM1	100	73.945	ENSONIG00000002290	pum1	100	75.614	Oreochromis_niloticus
ENSCSAG00000001028	PUM1	82	76.596	ENSOANG00000004902	-	100	76.393	Ornithorhynchus_anatinus
ENSCSAG00000001028	PUM1	100	98.000	ENSOCUG00000008641	PUM1	99	98.000	Oryctolagus_cuniculus
ENSCSAG00000001028	PUM1	100	73.775	ENSORLG00000011482	pum1	100	75.041	Oryzias_latipes
ENSCSAG00000001028	PUM1	100	73.856	ENSORLG00020019461	pum1	100	75.041	Oryzias_latipes_hni
ENSCSAG00000001028	PUM1	100	73.856	ENSORLG00015011375	pum1	100	75.122	Oryzias_latipes_hsok
ENSCSAG00000001028	PUM1	90	89.655	ENSOMEG00000009312	pum1	100	77.027	Oryzias_melastigma
ENSCSAG00000001028	PUM1	100	96.090	ENSOGAG00000011063	PUM1	100	96.090	Otolemur_garnettii
ENSCSAG00000001028	PUM1	100	97.750	ENSOARG00000001899	PUM1	100	99.275	Ovis_aries
ENSCSAG00000001028	PUM1	100	99.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSCSAG00000001028	PUM1	100	98.667	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSCSAG00000001028	PUM1	100	98.500	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSCSAG00000001028	PUM1	100	99.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSCSAG00000001028	PUM1	100	99.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSCSAG00000001028	PUM1	100	77.705	ENSPKIG00000010578	pum1	100	77.288	Paramormyrops_kingsleyae
ENSCSAG00000001028	PUM1	100	97.000	ENSPSIG00000014118	PUM1	100	97.000	Pelodiscus_sinensis
ENSCSAG00000001028	PUM1	80	78.019	ENSPMGG00000005836	pum1	100	80.241	Periophthalmus_magnuspinnatus
ENSCSAG00000001028	PUM1	100	98.250	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSCSAG00000001028	PUM1	100	97.005	ENSPCIG00000014151	PUM1	100	98.068	Phascolarctos_cinereus
ENSCSAG00000001028	PUM1	95	76.149	ENSPFOG00000007289	pum1	99	82.416	Poecilia_formosa
ENSCSAG00000001028	PUM1	100	72.271	ENSPLAG00000007256	pum1	100	76.868	Poecilia_latipinna
ENSCSAG00000001028	PUM1	90	76.117	ENSPMEG00000019543	pum1	99	77.161	Poecilia_mexicana
ENSCSAG00000001028	PUM1	100	73.361	ENSPREG00000005195	pum1	100	79.331	Poecilia_reticulata
ENSCSAG00000001028	PUM1	100	97.059	ENSPPYG00000001621	PUM1	100	97.059	Pongo_abelii
ENSCSAG00000001028	PUM1	77	99.383	ENSPCAG00000001979	PUM1	74	99.383	Procavia_capensis
ENSCSAG00000001028	PUM1	100	98.750	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSCSAG00000001028	PUM1	100	96.500	ENSPVAG00000005207	PUM1	97	96.500	Pteropus_vampyrus
ENSCSAG00000001028	PUM1	100	73.443	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSCSAG00000001028	PUM1	100	78.146	ENSPNAG00000026728	pum1	100	79.175	Pygocentrus_nattereri
ENSCSAG00000001028	PUM1	100	97.833	ENSRNOG00000011709	Pum1	100	97.833	Rattus_norvegicus
ENSCSAG00000001028	PUM1	100	99.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSCSAG00000001028	PUM1	100	99.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000001028	PUM1	100	98.917	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCSAG00000001028	PUM1	100	96.839	ENSSHAG00000010918	PUM1	100	96.839	Sarcophilus_harrisii
ENSCSAG00000001028	PUM1	90	88.506	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSCSAG00000001028	PUM1	100	73.361	ENSSDUG00000009021	pum1	100	75.614	Seriola_dumerili
ENSCSAG00000001028	PUM1	96	74.667	ENSSLDG00000009667	pum1	100	77.380	Seriola_lalandi_dorsalis
ENSCSAG00000001028	PUM1	94	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSCSAG00000001028	PUM1	100	96.333	ENSSPUG00000006267	PUM1	100	96.333	Sphenodon_punctatus
ENSCSAG00000001028	PUM1	90	88.506	ENSSPAG00000016636	pum1	100	77.606	Stegastes_partitus
ENSCSAG00000001028	PUM1	100	99.190	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSCSAG00000001028	PUM1	100	73.339	ENSTRUG00000013121	pum1	100	81.509	Takifugu_rubripes
ENSCSAG00000001028	PUM1	100	73.663	ENSTNIG00000016983	pum1	99	75.678	Tetraodon_nigroviridis
ENSCSAG00000001028	PUM1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSCSAG00000001028	PUM1	92	98.375	ENSTTRG00000007436	PUM1	90	98.375	Tursiops_truncatus
ENSCSAG00000001028	PUM1	99	97.993	ENSUAMG00000018262	-	100	97.993	Ursus_americanus
ENSCSAG00000001028	PUM1	95	99.758	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSCSAG00000001028	PUM1	93	99.661	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSCSAG00000001028	PUM1	100	98.583	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSCSAG00000001028	PUM1	100	86.606	ENSXETG00000012904	pum1	99	86.439	Xenopus_tropicalis
ENSCSAG00000001028	PUM1	100	72.705	ENSXMAG00000002945	pum1	100	76.663	Xiphophorus_maculatus