EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAG00000001135 (Gene tree)
Gene ID
103225052
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Chlorocebus_sabaeus
Status
putative
Strand
Minus strand
Length
15963 bases
Position
chr20:93161877-93177839
Accession
103225052
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAP00000016879PABPPF00658.181.2e-3111
ENSCSAP00000016879RRM_5PF13893.64.6e-0911
ENSCSAP00000016879RRM_1PF00076.226e-9214
ENSCSAP00000016879RRM_1PF00076.226e-9224
ENSCSAP00000016879RRM_1PF00076.226e-9234
ENSCSAP00000016879RRM_1PF00076.226e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAT00000017398PABPC4-2013173XM_007979297ENSCSAP00000016879660 (aa)XP_007977488A0A0D9S7P0
Gene Model
Click here to download ENSCSAG00000001135's gene model file
Pathways
Pathway IDPathway NameSource
csab03013RNA transportKEGG
csab03015mRNA surveillance pathwayKEGG
csab03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000001135's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAG00000001135PABPC45231.646ENSCSAG00000000499HNRNPA05032.450
ENSCSAG00000001135PABPC45634.940ENSCSAG00000009718ELAVL28334.940
ENSCSAG00000001135PABPC45537.500ENSCSAG00000013405CELF25637.500
ENSCSAG00000001135PABPC49975.224ENSCSAG00000012017PABPC19975.075
ENSCSAG00000001135PABPC45676.650ENSCSAG00000000102-9976.650
ENSCSAG00000001135PABPC45630.921ENSCSAG00000001257ELAVL48730.921
ENSCSAG00000001135PABPC49864.000ENSCSAG00000014242PABPC1L9964.977
ENSCSAG00000001135PABPC45767.135ENSCSAG00000000065PABPC59666.942
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAG00000001135PABPC410099.848ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCSAG00000001135PABPC49979.697ENSAPOG00000001161pabpc410080.269Acanthochromis_polyacanthus
ENSCSAG00000001135PABPC49855.146ENSAMEG00000015083-9954.839Ailuropoda_melanoleuca
ENSCSAG00000001135PABPC410099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSCSAG00000001135PABPC410080.419ENSACIG00000023343pabpc410081.016Amphilophus_citrinellus
ENSCSAG00000001135PABPC49979.848ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSCSAG00000001135PABPC49979.848ENSAPEG00000019196pabpc410080.120Amphiprion_percula
ENSCSAG00000001135PABPC49978.550ENSATEG00000007402pabpc410079.254Anabas_testudineus
ENSCSAG00000001135PABPC49987.405ENSAPLG00000009729-10087.405Anas_platyrhynchos
ENSCSAG00000001135PABPC49985.714ENSACAG00000002544PABPC410085.714Anolis_carolinensis
ENSCSAG00000001135PABPC410099.697ENSANAG00000025079PABPC410099.697Aotus_nancymaae
ENSCSAG00000001135PABPC410079.522ENSACLG00000019558pabpc410080.120Astatotilapia_calliptera
ENSCSAG00000001135PABPC49975.758ENSAMXG00000018779pabpc49976.364Astyanax_mexicanus
ENSCSAG00000001135PABPC45586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSCSAG00000001135PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSCSAG00000001135PABPC47883.883ENSCJAG00000045953-9283.824Callithrix_jacchus
ENSCSAG00000001135PABPC410099.545ENSCJAG00000002512-10099.545Callithrix_jacchus
ENSCSAG00000001135PABPC49999.161ENSCAFG00000003081PABPC410095.000Canis_familiaris
ENSCSAG00000001135PABPC410099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSCSAG00000001135PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSCSAG00000001135PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSCSAG00000001135PABPC410099.545ENSTSYG00000006532PABPC410099.545Carlito_syrichta
ENSCSAG00000001135PABPC49999.544ENSCAPG00000015984PABPC410099.544Cavia_aperea
ENSCSAG00000001135PABPC410099.545ENSCPOG00000009552PABPC410099.545Cavia_porcellus
ENSCSAG00000001135PABPC410099.697ENSCCAG00000037306PABPC410099.697Cebus_capucinus
ENSCSAG00000001135PABPC4100100.000ENSCATG00000042164PABPC4100100.000Cercocebus_atys
ENSCSAG00000001135PABPC410099.242ENSCLAG00000011899PABPC410099.242Chinchilla_lanigera
ENSCSAG00000001135PABPC48297.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSCSAG00000001135PABPC49987.709ENSCPBG00000001038PABPC410087.709Chrysemys_picta_bellii
ENSCSAG00000001135PABPC49999.846ENSCANG00000034177PABPC410099.846Colobus_angolensis_palliatus
ENSCSAG00000001135PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSCSAG00000001135PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSCSAG00000001135PABPC410079.073ENSCSEG00000000130pabpc410079.522Cynoglossus_semilaevis
ENSCSAG00000001135PABPC49979.939ENSCVAG00000019246pabpc410080.851Cyprinodon_variegatus
ENSCSAG00000001135PABPC49981.487ENSDARG00000059259pabpc410081.319Danio_rerio
ENSCSAG00000001135PABPC49899.655ENSDNOG00000018444-9999.655Dasypus_novemcinctus
ENSCSAG00000001135PABPC410097.121ENSDORG00000011581Pabpc410097.121Dipodomys_ordii
ENSCSAG00000001135PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCSAG00000001135PABPC48662.390ENSETEG00000009172-9962.435Echinops_telfairi
ENSCSAG00000001135PABPC49973.222ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSCSAG00000001135PABPC49773.457ENSEBUG00000013782pabpc49972.466Eptatretus_burgeri
ENSCSAG00000001135PABPC410099.697ENSEASG00005014119PABPC410099.697Equus_asinus_asinus
ENSCSAG00000001135PABPC410099.697ENSECAG00000009396PABPC410099.697Equus_caballus
ENSCSAG00000001135PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSCSAG00000001135PABPC49980.213ENSELUG00000003195pabpc49880.938Esox_lucius
ENSCSAG00000001135PABPC410099.394ENSFCAG00000015254-10099.394Felis_catus
ENSCSAG00000001135PABPC49986.950ENSFALG00000000543PABPC410086.950Ficedula_albicollis
ENSCSAG00000001135PABPC410099.545ENSFDAG00000020016-10099.545Fukomys_damarensis
ENSCSAG00000001135PABPC49067.490ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSCSAG00000001135PABPC410079.790ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSCSAG00000001135PABPC49979.336ENSGMOG00000019025pabpc49979.940Gadus_morhua
ENSCSAG00000001135PABPC49987.709ENSGALG00000003800PABPC410087.709Gallus_gallus
ENSCSAG00000001135PABPC410079.880ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCSAG00000001135PABPC410078.027ENSGACG00000007179pabpc410078.838Gasterosteus_aculeatus
ENSCSAG00000001135PABPC49987.557ENSGAGG00000001888PABPC410087.557Gopherus_agassizii
ENSCSAG00000001135PABPC410099.848ENSGGOG00000004002PABPC410099.848Gorilla_gorilla
ENSCSAG00000001135PABPC410079.671ENSHBUG00000020206pabpc410080.269Haplochromis_burtoni
ENSCSAG00000001135PABPC410099.697ENSHGLG00000011162PABPC410099.697Heterocephalus_glaber_female
ENSCSAG00000001135PABPC410097.273ENSHGLG00100001580PABPC410097.273Heterocephalus_glaber_male
ENSCSAG00000001135PABPC410079.192ENSHCOG00000012694pabpc410079.641Hippocampus_comes
ENSCSAG00000001135PABPC49879.755ENSIPUG00000016620pabpc49980.330Ictalurus_punctatus
ENSCSAG00000001135PABPC410097.121ENSSTOG00000010416PABPC410097.121Ictidomys_tridecemlineatus
ENSCSAG00000001135PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSCSAG00000001135PABPC49979.398ENSKMAG00000013597pabpc49979.669Kryptolebias_marmoratus
ENSCSAG00000001135PABPC410078.869ENSLBEG00000013654pabpc410079.583Labrus_bergylta
ENSCSAG00000001135PABPC49984.314ENSLACG00000011907PABPC410084.314Latimeria_chalumnae
ENSCSAG00000001135PABPC49982.078ENSLOCG00000001877pabpc49981.928Lepisosteus_oculatus
ENSCSAG00000001135PABPC410099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSCSAG00000001135PABPC4100100.000ENSMFAG00000041481PABPC4100100.000Macaca_fascicularis
ENSCSAG00000001135PABPC4100100.000ENSMMUG00000007497PABPC4100100.000Macaca_mulatta
ENSCSAG00000001135PABPC410099.848ENSMNEG00000043054PABPC410099.848Macaca_nemestrina
ENSCSAG00000001135PABPC4100100.000ENSMLEG00000040716PABPC4100100.000Mandrillus_leucophaeus
ENSCSAG00000001135PABPC49979.545ENSMAMG00000010025pabpc49980.000Mastacembelus_armatus
ENSCSAG00000001135PABPC410079.372ENSMZEG00005006141pabpc49290.807Maylandia_zebra
ENSCSAG00000001135PABPC49987.081ENSMGAG00000005408PABPC410087.081Meleagris_gallopavo
ENSCSAG00000001135PABPC45581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCSAG00000001135PABPC46989.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSCSAG00000001135PABPC47495.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSCSAG00000001135PABPC49973.480ENSMICG00000036729-10076.014Microcebus_murinus
ENSCSAG00000001135PABPC48995.431ENSMICG00000016633-9799.149Microcebus_murinus
ENSCSAG00000001135PABPC410097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSCSAG00000001135PABPC410074.815ENSMMOG00000002363pabpc49975.852Mola_mola
ENSCSAG00000001135PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSCSAG00000001135PABPC45674.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSCSAG00000001135PABPC49979.154ENSMALG00000011017pabpc410079.285Monopterus_albus
ENSCSAG00000001135PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCSAG00000001135PABPC49983.898MGP_CAROLIEiJ_G0024864-10083.898Mus_caroli
ENSCSAG00000001135PABPC410098.030ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCSAG00000001135PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCSAG00000001135PABPC49978.752MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCSAG00000001135PABPC49551.343ENSMPUG00000006836-10051.185Mustela_putorius_furo
ENSCSAG00000001135PABPC410099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSCSAG00000001135PABPC410092.424ENSMLUG00000012068PABPC410092.424Myotis_lucifugus
ENSCSAG00000001135PABPC410096.970ENSNGAG00000018292Pabpc410096.970Nannospalax_galili
ENSCSAG00000001135PABPC45792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCSAG00000001135PABPC46486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCSAG00000001135PABPC410097.576ENSNLEG00000011928PABPC410097.576Nomascus_leucogenys
ENSCSAG00000001135PABPC48298.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSCSAG00000001135PABPC45085.714ENSODEG00000013457-10085.714Octodon_degus
ENSCSAG00000001135PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSCSAG00000001135PABPC410098.636ENSODEG00000006592-10098.636Octodon_degus
ENSCSAG00000001135PABPC410079.671ENSONIG00000008176pabpc410079.970Oreochromis_niloticus
ENSCSAG00000001135PABPC49987.405ENSOANG00000010001PABPC410087.405Ornithorhynchus_anatinus
ENSCSAG00000001135PABPC49699.367ENSOCUG00000000562PABPC48899.367Oryctolagus_cuniculus
ENSCSAG00000001135PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSCSAG00000001135PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSCSAG00000001135PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSCSAG00000001135PABPC49979.848ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSCSAG00000001135PABPC410096.983ENSOGAG00000004067PABPC410096.983Otolemur_garnettii
ENSCSAG00000001135PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSCSAG00000001135PABPC410099.848ENSPPAG00000043625PABPC410099.848Pan_paniscus
ENSCSAG00000001135PABPC410099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSCSAG00000001135PABPC410099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSCSAG00000001135PABPC410099.848ENSPTRG00000000573PABPC410099.848Pan_troglodytes
ENSCSAG00000001135PABPC410099.848ENSPANG00000009484PABPC410099.848Papio_anubis
ENSCSAG00000001135PABPC49981.089ENSPKIG00000025356pabpc49981.694Paramormyrops_kingsleyae
ENSCSAG00000001135PABPC49987.709ENSPSIG00000016892PABPC410087.709Pelodiscus_sinensis
ENSCSAG00000001135PABPC410072.455ENSPMGG00000009073pabpc49977.039Periophthalmus_magnuspinnatus
ENSCSAG00000001135PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSCSAG00000001135PABPC410097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSCSAG00000001135PABPC48970.132ENSPMAG00000002836pabpc410070.297Petromyzon_marinus
ENSCSAG00000001135PABPC49667.698ENSPMAG00000007885pabpc410066.854Petromyzon_marinus
ENSCSAG00000001135PABPC49888.717ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSCSAG00000001135PABPC410079.192ENSPFOG00000002682pabpc410079.940Poecilia_formosa
ENSCSAG00000001135PABPC410079.042ENSPLAG00000010112pabpc410080.389Poecilia_latipinna
ENSCSAG00000001135PABPC49979.635ENSPMEG00000019739pabpc410080.090Poecilia_mexicana
ENSCSAG00000001135PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSCSAG00000001135PABPC410099.848ENSPPYG00000001506PABPC410099.848Pongo_abelii
ENSCSAG00000001135PABPC410094.394ENSPCAG00000003341PABPC410094.394Procavia_capensis
ENSCSAG00000001135PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSCSAG00000001135PABPC410099.697ENSPCOG00000023725-10099.697Propithecus_coquereli
ENSCSAG00000001135PABPC49998.824ENSPVAG00000002187PABPC410098.824Pteropus_vampyrus
ENSCSAG00000001135PABPC410079.522ENSPNYG00000006134pabpc410080.120Pundamilia_nyererei
ENSCSAG00000001135PABPC410079.940ENSPNAG00000024355pabpc410080.090Pygocentrus_nattereri
ENSCSAG00000001135PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSCSAG00000001135PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSCSAG00000001135PABPC4100100.000ENSRBIG00000039761PABPC4100100.000Rhinopithecus_bieti
ENSCSAG00000001135PABPC4100100.000ENSRROG00000033355PABPC4100100.000Rhinopithecus_roxellana
ENSCSAG00000001135PABPC410099.545ENSSBOG00000026193PABPC410099.545Saimiri_boliviensis_boliviensis
ENSCSAG00000001135PABPC49888.563ENSSHAG00000018139PABPC410088.164Sarcophilus_harrisii
ENSCSAG00000001135PABPC49981.975ENSSFOG00015023514pabpc49981.875Scleropages_formosus
ENSCSAG00000001135PABPC49979.274ENSSMAG00000009007pabpc49980.030Scophthalmus_maximus
ENSCSAG00000001135PABPC49979.242ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSCSAG00000001135PABPC49979.242ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSCSAG00000001135PABPC410092.121ENSSARG00000000310PABPC410092.121Sorex_araneus
ENSCSAG00000001135PABPC49987.405ENSSPUG00000003204PABPC410087.253Sphenodon_punctatus
ENSCSAG00000001135PABPC49990.562ENSSPAG00000009252pabpc49979.136Stegastes_partitus
ENSCSAG00000001135PABPC410099.242ENSSSCG00000003660-10099.242Sus_scrofa
ENSCSAG00000001135PABPC48950.337ENSSSCG00000036170-9650.337Sus_scrofa
ENSCSAG00000001135PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSCSAG00000001135PABPC410078.743ENSTRUG00000005907pabpc49979.279Takifugu_rubripes
ENSCSAG00000001135PABPC410075.716ENSTNIG00000016902pabpc49975.716Tetraodon_nigroviridis
ENSCSAG00000001135PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSCSAG00000001135PABPC49983.333ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSCSAG00000001135PABPC410099.091ENSUAMG00000000303PABPC410099.091Ursus_americanus
ENSCSAG00000001135PABPC410099.091ENSUMAG00000019585PABPC410099.091Ursus_maritimus
ENSCSAG00000001135PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSCSAG00000001135PABPC410099.242ENSVVUG00000005215PABPC410099.242Vulpes_vulpes
ENSCSAG00000001135PABPC49979.818ENSXETG00000010946pabpc410079.818Xenopus_tropicalis
ENSCSAG00000001135PABPC45697.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCSAG00000001135PABPC49978.073ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCSAG00000001135PABPC410079.341ENSXMAG00000019007pabpc410080.240Xiphophorus_maculatus

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