EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000001506 (Gene tree)
Gene ID: 103224368
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 15647 bases
Position: chr20:33189742-33205388
Accession: 103224368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000016520	TRM13	PF05206.14	1.3e-92	1	1
ENSCSAP00000016520	zf-U11-48K	PF05253.12	1.8e-09	1	1
ENSCSAP00000016520	zf-TRM13_CCCH	PF11722.8	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000017027	TRMT13-201	1446	-	ENSCSAP00000016520	481 (aa)	XP_007976014	A0A0D9S6N1

Gene Model

Click here to download ENSCSAG00000001506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000001506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000001506	TRMT13	100	98.337	ENSG00000122435	TRMT13	100	98.337	Homo_sapiens
ENSCSAG00000001506	TRMT13	95	48.096	ENSAPOG00000015131	trmt13	99	48.096	Acanthochromis_polyacanthus
ENSCSAG00000001506	TRMT13	100	90.644	ENSAMEG00000008917	TRMT13	100	90.644	Ailuropoda_melanoleuca
ENSCSAG00000001506	TRMT13	98	51.959	ENSACIG00000005804	trmt13	97	51.037	Amphilophus_citrinellus
ENSCSAG00000001506	TRMT13	95	49.004	ENSAOCG00000023585	trmt13	99	49.004	Amphiprion_ocellaris
ENSCSAG00000001506	TRMT13	95	48.611	ENSAPEG00000004025	trmt13	99	48.611	Amphiprion_percula
ENSCSAG00000001506	TRMT13	97	51.674	ENSATEG00000006597	trmt13	97	51.674	Anabas_testudineus
ENSCSAG00000001506	TRMT13	88	67.209	ENSAPLG00000014924	TRMT13	99	67.209	Anas_platyrhynchos
ENSCSAG00000001506	TRMT13	96	64.440	ENSACAG00000003498	TRMT13	98	64.440	Anolis_carolinensis
ENSCSAG00000001506	TRMT13	100	97.713	ENSANAG00000019525	TRMT13	100	98.165	Aotus_nancymaae
ENSCSAG00000001506	TRMT13	96	53.602	ENSACLG00000020018	trmt13	99	53.602	Astatotilapia_calliptera
ENSCSAG00000001506	TRMT13	95	55.032	ENSAMXG00000017963	trmt13	97	55.460	Astyanax_mexicanus
ENSCSAG00000001506	TRMT13	100	90.437	ENSBTAG00000015781	TRMT13	100	90.437	Bos_taurus
ENSCSAG00000001506	TRMT13	100	95.842	ENSCJAG00000000200	TRMT13	99	98.165	Callithrix_jacchus
ENSCSAG00000001506	TRMT13	65	92.038	ENSCAFG00000020021	TRMT13	99	92.038	Canis_familiaris
ENSCSAG00000001506	TRMT13	57	92.308	ENSCAFG00020011572	TRMT13	95	91.636	Canis_lupus_dingo
ENSCSAG00000001506	TRMT13	100	90.644	ENSCHIG00000015395	TRMT13	100	90.644	Capra_hircus
ENSCSAG00000001506	TRMT13	98	82.664	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSCSAG00000001506	TRMT13	75	69.589	ENSCAPG00000009085	TRMT13	100	70.137	Cavia_aperea
ENSCSAG00000001506	TRMT13	100	89.189	ENSCPOG00000000694	TRMT13	100	89.189	Cavia_porcellus
ENSCSAG00000001506	TRMT13	100	97.505	ENSCCAG00000023772	TRMT13	100	97.505	Cebus_capucinus
ENSCSAG00000001506	TRMT13	100	98.960	ENSCATG00000033556	TRMT13	100	98.960	Cercocebus_atys
ENSCSAG00000001506	TRMT13	89	84.543	ENSCLAG00000008220	TRMT13	100	85.480	Chinchilla_lanigera
ENSCSAG00000001506	TRMT13	99	69.375	ENSCPBG00000026671	TRMT13	99	69.375	Chrysemys_picta_bellii
ENSCSAG00000001506	TRMT13	100	99.792	ENSCANG00000034659	TRMT13	100	99.792	Colobus_angolensis_palliatus
ENSCSAG00000001506	TRMT13	99	85.447	ENSCGRG00001021601	Trmt13	99	85.447	Cricetulus_griseus_chok1gshd
ENSCSAG00000001506	TRMT13	53	83.268	ENSCGRG00000000093	-	99	83.268	Cricetulus_griseus_crigri
ENSCSAG00000001506	TRMT13	98	48.626	ENSCSEG00000000591	trmt13	99	48.626	Cynoglossus_semilaevis
ENSCSAG00000001506	TRMT13	95	48.734	ENSCVAG00000017342	trmt13	93	50.000	Cyprinodon_variegatus
ENSCSAG00000001506	TRMT13	95	57.974	ENSDARG00000102846	trmt13	96	57.974	Danio_rerio
ENSCSAG00000001506	TRMT13	57	88.768	ENSDNOG00000001710	TRMT13	84	88.768	Dasypus_novemcinctus
ENSCSAG00000001506	TRMT13	100	88.150	ENSDORG00000015808	Trmt13	99	88.150	Dipodomys_ordii
ENSCSAG00000001506	TRMT13	95	31.237	FBgn0037435	CG18048	94	31.237	Drosophila_melanogaster
ENSCSAG00000001506	TRMT13	99	75.992	ENSETEG00000005819	TRMT13	99	75.992	Echinops_telfairi
ENSCSAG00000001506	TRMT13	95	45.591	ENSEBUG00000014444	trmt13	96	45.671	Eptatretus_burgeri
ENSCSAG00000001506	TRMT13	100	92.931	ENSEASG00005015918	TRMT13	100	92.931	Equus_asinus_asinus
ENSCSAG00000001506	TRMT13	100	93.347	ENSECAG00000022626	TRMT13	100	93.347	Equus_caballus
ENSCSAG00000001506	TRMT13	79	81.329	ENSEEUG00000000294	TRMT13	80	81.329	Erinaceus_europaeus
ENSCSAG00000001506	TRMT13	96	56.383	ENSELUG00000003803	trmt13	98	56.838	Esox_lucius
ENSCSAG00000001506	TRMT13	100	91.684	ENSFCAG00000030618	TRMT13	100	92.661	Felis_catus
ENSCSAG00000001506	TRMT13	99	64.435	ENSFALG00000002424	TRMT13	99	64.435	Ficedula_albicollis
ENSCSAG00000001506	TRMT13	99	90.966	ENSFDAG00000006342	TRMT13	99	90.966	Fukomys_damarensis
ENSCSAG00000001506	TRMT13	78	51.928	ENSFHEG00000022954	trmt13	97	51.500	Fundulus_heteroclitus
ENSCSAG00000001506	TRMT13	95	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSCSAG00000001506	TRMT13	95	65.714	ENSGALG00000005290	TRMT13	98	64.968	Gallus_gallus
ENSCSAG00000001506	TRMT13	75	50.943	ENSGAFG00000001577	trmt13	81	50.943	Gambusia_affinis
ENSCSAG00000001506	TRMT13	98	50.000	ENSGACG00000013428	trmt13	100	50.628	Gasterosteus_aculeatus
ENSCSAG00000001506	TRMT13	100	69.295	ENSGAGG00000023303	TRMT13	99	73.455	Gopherus_agassizii
ENSCSAG00000001506	TRMT13	100	97.713	ENSGGOG00000005616	TRMT13	100	97.713	Gorilla_gorilla
ENSCSAG00000001506	TRMT13	96	53.814	ENSHBUG00000007754	trmt13	99	53.814	Haplochromis_burtoni
ENSCSAG00000001506	TRMT13	99	91.597	ENSHGLG00000002164	TRMT13	99	91.597	Heterocephalus_glaber_female
ENSCSAG00000001506	TRMT13	99	91.597	ENSHGLG00100001618	TRMT13	99	91.597	Heterocephalus_glaber_male
ENSCSAG00000001506	TRMT13	96	48.069	ENSHCOG00000020553	trmt13	98	48.069	Hippocampus_comes
ENSCSAG00000001506	TRMT13	95	57.267	ENSIPUG00000024787	trmt13	98	58.225	Ictalurus_punctatus
ENSCSAG00000001506	TRMT13	100	93.971	ENSSTOG00000013483	TRMT13	100	93.971	Ictidomys_tridecemlineatus
ENSCSAG00000001506	TRMT13	99	88.655	ENSJJAG00000018012	Trmt13	100	88.125	Jaculus_jaculus
ENSCSAG00000001506	TRMT13	64	50.479	ENSKMAG00000007639	trmt13	92	50.479	Kryptolebias_marmoratus
ENSCSAG00000001506	TRMT13	96	50.943	ENSLBEG00000020238	trmt13	99	51.357	Labrus_bergylta
ENSCSAG00000001506	TRMT13	96	62.284	ENSLACG00000013153	TRMT13	100	61.194	Latimeria_chalumnae
ENSCSAG00000001506	TRMT13	97	57.479	ENSLOCG00000000418	trmt13	99	57.906	Lepisosteus_oculatus
ENSCSAG00000001506	TRMT13	77	88.919	ENSLAFG00000002383	TRMT13	100	88.919	Loxodonta_africana
ENSCSAG00000001506	TRMT13	100	99.168	ENSMFAG00000034681	TRMT13	100	99.168	Macaca_fascicularis
ENSCSAG00000001506	TRMT13	100	99.168	ENSMMUG00000004243	TRMT13	100	99.168	Macaca_mulatta
ENSCSAG00000001506	TRMT13	100	99.168	ENSMNEG00000036102	TRMT13	100	99.168	Macaca_nemestrina
ENSCSAG00000001506	TRMT13	100	98.960	ENSMLEG00000034258	TRMT13	100	98.960	Mandrillus_leucophaeus
ENSCSAG00000001506	TRMT13	96	51.899	ENSMAMG00000016597	trmt13	98	51.899	Mastacembelus_armatus
ENSCSAG00000001506	TRMT13	96	53.390	ENSMZEG00005020959	trmt13	99	53.390	Maylandia_zebra
ENSCSAG00000001506	TRMT13	89	66.511	ENSMGAG00000006970	TRMT13	100	66.511	Meleagris_gallopavo
ENSCSAG00000001506	TRMT13	99	84.375	ENSMAUG00000010448	Trmt13	99	84.375	Mesocricetus_auratus
ENSCSAG00000001506	TRMT13	100	93.971	ENSMICG00000005283	TRMT13	100	93.971	Microcebus_murinus
ENSCSAG00000001506	TRMT13	99	81.875	ENSMOCG00000019914	Trmt13	99	81.875	Microtus_ochrogaster
ENSCSAG00000001506	TRMT13	54	50.943	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSCSAG00000001506	TRMT13	100	76.337	ENSMODG00000003646	TRMT13	100	76.337	Monodelphis_domestica
ENSCSAG00000001506	TRMT13	96	50.972	ENSMALG00000020965	trmt13	97	50.972	Monopterus_albus
ENSCSAG00000001506	TRMT13	99	86.373	MGP_CAROLIEiJ_G0025568	Trmt13	94	91.667	Mus_caroli
ENSCSAG00000001506	TRMT13	99	86.373	ENSMUSG00000033439	Trmt13	94	91.667	Mus_musculus
ENSCSAG00000001506	TRMT13	99	87.212	MGP_PahariEiJ_G0027014	Trmt13	99	87.212	Mus_pahari
ENSCSAG00000001506	TRMT13	99	86.373	MGP_SPRETEiJ_G0026518	Trmt13	94	91.667	Mus_spretus
ENSCSAG00000001506	TRMT13	79	88.714	ENSMPUG00000002078	-	100	88.714	Mustela_putorius_furo
ENSCSAG00000001506	TRMT13	100	79.626	ENSMLUG00000002124	TRMT13	100	79.626	Myotis_lucifugus
ENSCSAG00000001506	TRMT13	98	49.476	ENSNBRG00000006783	trmt13	97	49.476	Neolamprologus_brichardi
ENSCSAG00000001506	TRMT13	100	98.337	ENSNLEG00000035917	TRMT13	100	98.337	Nomascus_leucogenys
ENSCSAG00000001506	TRMT13	51	73.790	ENSMEUG00000013346	-	100	73.790	Notamacropus_eugenii
ENSCSAG00000001506	TRMT13	67	90.441	ENSOPRG00000012048	TRMT13	67	90.441	Ochotona_princeps
ENSCSAG00000001506	TRMT13	96	53.602	ENSONIG00000004574	trmt13	99	53.602	Oreochromis_niloticus
ENSCSAG00000001506	TRMT13	89	74.478	ENSOANG00000012057	TRMT13	99	74.478	Ornithorhynchus_anatinus
ENSCSAG00000001506	TRMT13	100	92.723	ENSOCUG00000023095	TRMT13	100	92.723	Oryctolagus_cuniculus
ENSCSAG00000001506	TRMT13	96	48.729	ENSORLG00000003320	trmt13	99	49.364	Oryzias_latipes
ENSCSAG00000001506	TRMT13	95	48.060	ENSORLG00020005972	trmt13	97	49.057	Oryzias_latipes_hni
ENSCSAG00000001506	TRMT13	96	52.979	ENSORLG00015002270	trmt13	99	52.979	Oryzias_latipes_hsok
ENSCSAG00000001506	TRMT13	97	51.483	ENSOMEG00000006724	trmt13	94	52.452	Oryzias_melastigma
ENSCSAG00000001506	TRMT13	98	92.600	ENSOGAG00000005618	TRMT13	97	92.100	Otolemur_garnettii
ENSCSAG00000001506	TRMT13	100	90.644	ENSOARG00000017983	TRMT13	100	90.644	Ovis_aries
ENSCSAG00000001506	TRMT13	100	97.713	ENSPPAG00000043736	TRMT13	100	97.713	Pan_paniscus
ENSCSAG00000001506	TRMT13	100	92.100	ENSPPRG00000003424	TRMT13	100	92.661	Panthera_pardus
ENSCSAG00000001506	TRMT13	100	92.100	ENSPTIG00000018598	TRMT13	100	92.661	Panthera_tigris_altaica
ENSCSAG00000001506	TRMT13	100	97.713	ENSPTRG00000001001	TRMT13	100	97.713	Pan_troglodytes
ENSCSAG00000001506	TRMT13	100	99.584	ENSPANG00000007598	TRMT13	100	99.584	Papio_anubis
ENSCSAG00000001506	TRMT13	96	56.957	ENSPKIG00000001514	trmt13	98	56.957	Paramormyrops_kingsleyae
ENSCSAG00000001506	TRMT13	86	69.065	ENSPSIG00000012703	TRMT13	99	69.065	Pelodiscus_sinensis
ENSCSAG00000001506	TRMT13	96	51.820	ENSPMGG00000013298	trmt13	94	51.820	Periophthalmus_magnuspinnatus
ENSCSAG00000001506	TRMT13	99	83.750	ENSPEMG00000000275	Trmt13	99	83.750	Peromyscus_maniculatus_bairdii
ENSCSAG00000001506	TRMT13	95	45.816	ENSPMAG00000000823	trmt13	97	45.816	Petromyzon_marinus
ENSCSAG00000001506	TRMT13	99	76.299	ENSPCIG00000007699	TRMT13	99	76.923	Phascolarctos_cinereus
ENSCSAG00000001506	TRMT13	99	49.375	ENSPFOG00000008675	trmt13	99	49.375	Poecilia_formosa
ENSCSAG00000001506	TRMT13	95	49.149	ENSPLAG00000009709	trmt13	99	49.149	Poecilia_latipinna
ENSCSAG00000001506	TRMT13	95	47.752	ENSPMEG00000022954	trmt13	99	47.752	Poecilia_mexicana
ENSCSAG00000001506	TRMT13	75	52.022	ENSPREG00000005645	trmt13	91	50.542	Poecilia_reticulata
ENSCSAG00000001506	TRMT13	100	97.921	ENSPPYG00000001120	TRMT13	100	97.921	Pongo_abelii
ENSCSAG00000001506	TRMT13	100	88.358	ENSPCAG00000002340	TRMT13	100	88.358	Procavia_capensis
ENSCSAG00000001506	TRMT13	100	93.347	ENSPCOG00000017984	TRMT13	100	93.347	Propithecus_coquereli
ENSCSAG00000001506	TRMT13	100	91.892	ENSPVAG00000017430	TRMT13	100	91.892	Pteropus_vampyrus
ENSCSAG00000001506	TRMT13	96	51.907	ENSPNYG00000013690	trmt13	99	51.907	Pundamilia_nyererei
ENSCSAG00000001506	TRMT13	98	55.814	ENSPNAG00000022130	trmt13	99	55.814	Pygocentrus_nattereri
ENSCSAG00000001506	TRMT13	99	86.402	ENSRNOG00000015140	Trmt13	96	86.402	Rattus_norvegicus
ENSCSAG00000001506	TRMT13	100	99.792	ENSRBIG00000037686	TRMT13	100	99.792	Rhinopithecus_bieti
ENSCSAG00000001506	TRMT13	100	99.792	ENSRROG00000044057	TRMT13	100	99.792	Rhinopithecus_roxellana
ENSCSAG00000001506	TRMT13	100	97.297	ENSSBOG00000026541	TRMT13	100	98.165	Saimiri_boliviensis_boliviensis
ENSCSAG00000001506	TRMT13	91	77.346	ENSSHAG00000005213	TRMT13	97	77.346	Sarcophilus_harrisii
ENSCSAG00000001506	TRMT13	96	55.054	ENSSFOG00015017560	trmt13	98	55.054	Scleropages_formosus
ENSCSAG00000001506	TRMT13	99	50.716	ENSSMAG00000014592	trmt13	99	50.716	Scophthalmus_maximus
ENSCSAG00000001506	TRMT13	98	50.823	ENSSDUG00000015508	trmt13	99	50.505	Seriola_dumerili
ENSCSAG00000001506	TRMT13	98	50.513	ENSSLDG00000019060	trmt13	98	50.513	Seriola_lalandi_dorsalis
ENSCSAG00000001506	TRMT13	99	76.211	ENSSARG00000010344	TRMT13	99	76.211	Sorex_araneus
ENSCSAG00000001506	TRMT13	96	67.819	ENSSPUG00000016339	TRMT13	100	67.819	Sphenodon_punctatus
ENSCSAG00000001506	TRMT13	95	52.473	ENSSPAG00000011922	trmt13	98	52.553	Stegastes_partitus
ENSCSAG00000001506	TRMT13	100	91.476	ENSSSCG00000006869	TRMT13	100	91.476	Sus_scrofa
ENSCSAG00000001506	TRMT13	97	66.026	ENSTGUG00000005253	TRMT13	100	66.026	Taeniopygia_guttata
ENSCSAG00000001506	TRMT13	95	49.679	ENSTRUG00000008400	trmt13	99	49.684	Takifugu_rubripes
ENSCSAG00000001506	TRMT13	86	76.202	ENSTBEG00000008911	TRMT13	100	76.202	Tupaia_belangeri
ENSCSAG00000001506	TRMT13	51	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSCSAG00000001506	TRMT13	100	85.239	ENSUAMG00000017251	TRMT13	100	85.239	Ursus_americanus
ENSCSAG00000001506	TRMT13	100	90.437	ENSUMAG00000007901	TRMT13	100	90.437	Ursus_maritimus
ENSCSAG00000001506	TRMT13	90	73.843	ENSVPAG00000001034	TRMT13	100	73.843	Vicugna_pacos
ENSCSAG00000001506	TRMT13	99	91.476	ENSVVUG00000021996	TRMT13	99	91.476	Vulpes_vulpes
ENSCSAG00000001506	TRMT13	96	55.794	ENSXETG00000013204	trmt13	96	55.940	Xenopus_tropicalis
ENSCSAG00000001506	TRMT13	95	47.983	ENSXMAG00000010765	trmt13	99	47.983	Xiphophorus_maculatus