EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000001531 (Gene tree)
Gene ID: 103224321
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 10756 bases
Position: chr20:24882780-24893535
Accession: 103224321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000016497	PRP38	PF03371.15	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000017002	PRPF38B-201	4918	-	ENSCSAP00000016497	546 (aa)	XP_007975948	A0A0D9S6K8

Gene Model

Click here to download ENSCSAG00000001531's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000001531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000001531	PRPF38B	100	98.352	ENSCJAG00000002510	-	100	98.352	Callithrix_jacchus
ENSCSAG00000001531	PRPF38B	80	95.172	ENSTSYG00000029817	PRPF38B	97	95.012	Carlito_syrichta
ENSCSAG00000001531	PRPF38B	100	98.718	ENSCCAG00000033941	-	100	98.718	Cebus_capucinus
ENSCSAG00000001531	PRPF38B	100	99.817	ENSCANG00000027711	PRPF38B	100	99.817	Colobus_angolensis_palliatus
ENSCSAG00000001531	PRPF38B	100	98.535	ENSLAFG00000017112	PRPF38B	100	98.535	Loxodonta_africana
ENSCSAG00000001531	PRPF38B	100	99.817	ENSMMUG00000010155	PRPF38B	100	99.817	Macaca_mulatta
ENSCSAG00000001531	PRPF38B	100	99.634	ENSMNEG00000032003	-	100	99.634	Macaca_nemestrina
ENSCSAG00000001531	PRPF38B	100	98.535	ENSMICG00000032109	PRPF38B	100	98.535	Microcebus_murinus
ENSCSAG00000001531	PRPF38B	80	96.552	ENSODEG00000007646	PRPF38B	100	96.552	Octodon_degus
ENSCSAG00000001531	PRPF38B	83	98.458	ENSOCUG00000027424	PRPF38B	100	98.458	Oryctolagus_cuniculus
ENSCSAG00000001531	PRPF38B	100	99.084	ENSPPYG00000001092	PRPF38B	100	99.084	Pongo_abelii
ENSCSAG00000001531	PRPF38B	100	98.718	ENSPCOG00000016051	PRPF38B	100	98.718	Propithecus_coquereli
ENSCSAG00000001531	PRPF38B	100	99.451	ENSRBIG00000043351	PRPF38B	100	99.451	Rhinopithecus_bieti
ENSCSAG00000001531	PRPF38B	100	99.451	ENSRROG00000029232	PRPF38B	100	99.451	Rhinopithecus_roxellana