EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000002216 (Gene tree)
Gene ID: 103243737
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 8460 bases
Position: chr16:73757072-73765531
Accession: 103243737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000015818	RRM_1	PF00076.22	8.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000000235	ALYREF-201	5799	-	ENSCSAP00000015818	264 (aa)	XP_008011476	A0A0D9S4M9

Gene Model

Click here to download ENSCSAG00000002216's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03013	RNA transport	KEGG
csab03015	mRNA surveillance pathway	KEGG
csab03040	Spliceosome	KEGG
csab05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000002216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000002216	ALYREF	100	99.242	ENSG00000183684	ALYREF	100	99.242	Homo_sapiens
ENSCSAG00000002216	ALYREF	97	68.345	ENSAPOG00000018455	ALYREF	100	72.302	Acanthochromis_polyacanthus
ENSCSAG00000002216	ALYREF	78	86.190	ENSAMEG00000017463	ALYREF	74	91.848	Ailuropoda_melanoleuca
ENSCSAG00000002216	ALYREF	97	75.954	ENSACAG00000010526	ALYREF	100	74.427	Anolis_carolinensis
ENSCSAG00000002216	ALYREF	67	97.740	ENSANAG00000022638	-	75	97.740	Aotus_nancymaae
ENSCSAG00000002216	ALYREF	100	81.818	ENSANAG00000028229	-	80	84.848	Aotus_nancymaae
ENSCSAG00000002216	ALYREF	97	98.054	ENSBTAG00000008498	ALYREF	100	98.054	Bos_taurus
ENSCSAG00000002216	ALYREF	100	98.485	ENSCJAG00000039942	ALYREF	100	98.485	Callithrix_jacchus
ENSCSAG00000002216	ALYREF	97	98.054	ENSCAFG00000005877	ALYREF	100	98.054	Canis_familiaris
ENSCSAG00000002216	ALYREF	97	98.054	ENSCAFG00020009815	ALYREF	100	98.054	Canis_lupus_dingo
ENSCSAG00000002216	ALYREF	97	97.287	ENSCHIG00000017396	ALYREF	97	97.287	Capra_hircus
ENSCSAG00000002216	ALYREF	85	82.684	ENSTSYG00000002272	ALYREF	69	98.286	Carlito_syrichta
ENSCSAG00000002216	ALYREF	51	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSCSAG00000002216	ALYREF	97	96.887	ENSCPOG00000013710	ALYREF	100	96.887	Cavia_porcellus
ENSCSAG00000002216	ALYREF	100	98.864	ENSCCAG00000020578	-	100	98.864	Cebus_capucinus
ENSCSAG00000002216	ALYREF	97	76.265	ENSCCAG00000030237	-	100	73.152	Cebus_capucinus
ENSCSAG00000002216	ALYREF	100	100.000	ENSCATG00000033169	ALYREF	100	100.000	Cercocebus_atys
ENSCSAG00000002216	ALYREF	97	88.327	ENSCLAG00000015026	ALYREF	100	88.327	Chinchilla_lanigera
ENSCSAG00000002216	ALYREF	69	96.685	ENSCANG00000034056	ALYREF	89	89.831	Colobus_angolensis_palliatus
ENSCSAG00000002216	ALYREF	97	94.163	ENSCGRG00001018191	-	100	92.218	Cricetulus_griseus_chok1gshd
ENSCSAG00000002216	ALYREF	72	91.623	ENSCGRG00000015871	-	90	87.097	Cricetulus_griseus_crigri
ENSCSAG00000002216	ALYREF	70	53.608	ENSCSEG00000015438	-	98	54.187	Cynoglossus_semilaevis
ENSCSAG00000002216	ALYREF	67	96.067	ENSDNOG00000002563	ALYREF	75	96.067	Dasypus_novemcinctus
ENSCSAG00000002216	ALYREF	85	83.111	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSCSAG00000002216	ALYREF	67	93.820	ENSETEG00000016596	ALYREF	100	93.258	Echinops_telfairi
ENSCSAG00000002216	ALYREF	100	96.970	ENSEASG00005005824	ALYREF	98	96.970	Equus_asinus_asinus
ENSCSAG00000002216	ALYREF	100	96.970	ENSECAG00000018754	ALYREF	98	96.970	Equus_caballus
ENSCSAG00000002216	ALYREF	65	97.093	ENSEEUG00000010164	ALYREF	100	97.093	Erinaceus_europaeus
ENSCSAG00000002216	ALYREF	99	97.710	ENSFCAG00000022549	ALYREF	99	97.710	Felis_catus
ENSCSAG00000002216	ALYREF	81	86.047	ENSFDAG00000001213	ALYREF	93	86.408	Fukomys_damarensis
ENSCSAG00000002216	ALYREF	97	84.170	ENSGALG00000007237	ALYREF	100	83.784	Gallus_gallus
ENSCSAG00000002216	ALYREF	97	70.566	ENSGACG00000013328	ALYREF	100	72.556	Gasterosteus_aculeatus
ENSCSAG00000002216	ALYREF	97	83.206	ENSGAGG00000008536	ALYREF	100	82.443	Gopherus_agassizii
ENSCSAG00000002216	ALYREF	100	99.621	ENSGGOG00000013935	ALYREF	100	99.621	Gorilla_gorilla
ENSCSAG00000002216	ALYREF	97	93.385	ENSHGLG00000008293	ALYREF	100	93.774	Heterocephalus_glaber_female
ENSCSAG00000002216	ALYREF	78	81.057	ENSHGLG00100006949	ALYREF	77	93.923	Heterocephalus_glaber_male
ENSCSAG00000002216	ALYREF	97	68.165	ENSHCOG00000015046	ALYREF	100	69.485	Hippocampus_comes
ENSCSAG00000002216	ALYREF	97	93.774	ENSJJAG00000004134	-	100	93.774	Jaculus_jaculus
ENSCSAG00000002216	ALYREF	97	70.833	ENSLACG00000005694	ALYREF	100	71.970	Latimeria_chalumnae
ENSCSAG00000002216	ALYREF	71	94.681	ENSLAFG00000003083	ALYREF	98	93.478	Loxodonta_africana
ENSCSAG00000002216	ALYREF	100	97.348	ENSMFAG00000001394	ALYREF	100	97.348	Macaca_fascicularis
ENSCSAG00000002216	ALYREF	100	100.000	ENSMMUG00000012884	ALYREF	100	100.000	Macaca_mulatta
ENSCSAG00000002216	ALYREF	100	100.000	ENSMNEG00000043666	ALYREF	100	100.000	Macaca_nemestrina
ENSCSAG00000002216	ALYREF	70	88.421	ENSMLEG00000043353	ALYREF	83	89.444	Mandrillus_leucophaeus
ENSCSAG00000002216	ALYREF	97	78.988	ENSMAUG00000020552	-	100	76.744	Mesocricetus_auratus
ENSCSAG00000002216	ALYREF	99	97.338	ENSMICG00000017403	ALYREF	99	97.338	Microcebus_murinus
ENSCSAG00000002216	ALYREF	97	82.955	ENSMOCG00000016792	-	100	81.818	Microtus_ochrogaster
ENSCSAG00000002216	ALYREF	97	96.109	ENSMODG00000003030	ALYREF	84	96.109	Monodelphis_domestica
ENSCSAG00000002216	ALYREF	97	69.455	ENSMALG00000019408	ALYREF	100	72.364	Monopterus_albus
ENSCSAG00000002216	ALYREF	97	96.109	MGP_CAROLIEiJ_G0017529	Alyref	100	96.109	Mus_caroli
ENSCSAG00000002216	ALYREF	97	73.541	MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	Mus_caroli
ENSCSAG00000002216	ALYREF	98	61.538	ENSMUSG00000094144	Gm21312	100	53.521	Mus_musculus
ENSCSAG00000002216	ALYREF	97	61.754	ENSMUSG00000097550	Gm21304	100	53.521	Mus_musculus
ENSCSAG00000002216	ALYREF	98	61.538	ENSMUSG00000097427	Gm6763	99	59.880	Mus_musculus
ENSCSAG00000002216	ALYREF	97	73.643	ENSMUSG00000060244	Alyref2	100	72.093	Mus_musculus
ENSCSAG00000002216	ALYREF	97	96.109	ENSMUSG00000025134	Alyref	100	96.109	Mus_musculus
ENSCSAG00000002216	ALYREF	97	61.754	ENSMUSG00000091779	Gm21293	100	53.521	Mus_musculus
ENSCSAG00000002216	ALYREF	89	65.106	ENSMUSG00000112856	Gm4305	63	64.706	Mus_musculus
ENSCSAG00000002216	ALYREF	89	63.983	ENSMUSG00000094314	Gm4301	63	63.235	Mus_musculus
ENSCSAG00000002216	ALYREF	98	61.538	ENSMUSG00000095022	Gm20765	100	53.521	Mus_musculus
ENSCSAG00000002216	ALYREF	89	65.106	ENSMUSG00000112931	Gm4303	63	64.706	Mus_musculus
ENSCSAG00000002216	ALYREF	97	60.902	ENSMUSG00000117091	AC153137.1	100	57.197	Mus_musculus
ENSCSAG00000002216	ALYREF	98	61.538	ENSMUSG00000097878	Gm8764	99	59.880	Mus_musculus
ENSCSAG00000002216	ALYREF	89	65.106	ENSMUSG00000096744	Gm4307	63	64.706	Mus_musculus
ENSCSAG00000002216	ALYREF	98	60.690	ENSMUSG00000090854	Gm4340	100	52.431	Mus_musculus
ENSCSAG00000002216	ALYREF	89	65.254	ENSMUSG00000091101	Gm4302	62	64.706	Mus_musculus
ENSCSAG00000002216	ALYREF	97	61.278	ENSMUSG00000086727	4931428L18Rik	100	57.955	Mus_musculus
ENSCSAG00000002216	ALYREF	89	63.983	ENSMUSG00000096640	Gm4312	63	63.235	Mus_musculus
ENSCSAG00000002216	ALYREF	81	67.442	MGP_PahariEiJ_G0027255	-	82	65.700	Mus_pahari
ENSCSAG00000002216	ALYREF	81	67.442	MGP_PahariEiJ_G0027254	-	84	65.700	Mus_pahari
ENSCSAG00000002216	ALYREF	72	97.354	MGP_PahariEiJ_G0018656	-	99	97.354	Mus_pahari
ENSCSAG00000002216	ALYREF	97	96.109	MGP_PahariEiJ_G0018655	-	100	96.109	Mus_pahari
ENSCSAG00000002216	ALYREF	97	96.109	MGP_SPRETEiJ_G0018373	Alyref	100	96.109	Mus_spretus
ENSCSAG00000002216	ALYREF	67	57.269	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSCSAG00000002216	ALYREF	97	73.256	MGP_SPRETEiJ_G0015679	Alyref2	100	71.705	Mus_spretus
ENSCSAG00000002216	ALYREF	95	62.698	ENSMLUG00000027352	-	77	62.302	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	61.111	ENSMLUG00000024447	-	76	61.111	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	61.569	ENSMLUG00000030407	-	77	60.392	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	58.077	ENSMLUG00000024471	-	82	53.257	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	82	58.904	ENSMLUG00000028343	-	85	64.607	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	56.202	ENSMLUG00000015043	-	98	52.896	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	59.766	ENSMLUG00000022869	-	71	62.319	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	97	53.008	ENSMLUG00000023213	-	72	53.476	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	70.238	ENSMLUG00000027516	-	78	67.460	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	62.745	ENSMLUG00000025677	-	77	61.569	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	80	82.710	ENSMLUG00000009555	-	66	92.697	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	62.451	ENSMLUG00000024976	-	79	59.684	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	64.729	ENSMLUG00000002626	-	98	65.891	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	95	63.347	ENSMLUG00000026271	-	79	62.151	Myotis_lucifugus
ENSCSAG00000002216	ALYREF	100	99.621	ENSNLEG00000010313	ALYREF	100	99.621	Nomascus_leucogenys
ENSCSAG00000002216	ALYREF	80	74.762	ENSMEUG00000002210	ALYREF	92	74.762	Notamacropus_eugenii
ENSCSAG00000002216	ALYREF	51	91.791	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSCSAG00000002216	ALYREF	97	96.154	ENSODEG00000008359	ALYREF	100	96.154	Octodon_degus
ENSCSAG00000002216	ALYREF	97	69.091	ENSORLG00000012331	ALYREF	100	71.636	Oryzias_latipes
ENSCSAG00000002216	ALYREF	75	89.899	ENSOGAG00000012409	ALYREF	76	94.444	Otolemur_garnettii
ENSCSAG00000002216	ALYREF	67	97.753	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSCSAG00000002216	ALYREF	99	97.710	ENSPPRG00000010829	ALYREF	99	97.710	Panthera_pardus
ENSCSAG00000002216	ALYREF	55	97.931	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSCSAG00000002216	ALYREF	100	99.621	ENSPTRG00000009774	ALYREF	100	99.621	Pan_troglodytes
ENSCSAG00000002216	ALYREF	100	100.000	ENSPANG00000019265	ALYREF	100	100.000	Papio_anubis
ENSCSAG00000002216	ALYREF	50	92.481	ENSPSIG00000017541	ALYREF	98	93.233	Pelodiscus_sinensis
ENSCSAG00000002216	ALYREF	100	99.242	ENSPPYG00000008749	ALYREF	100	99.242	Pongo_abelii
ENSCSAG00000002216	ALYREF	99	97.338	ENSPCOG00000020874	ALYREF	99	97.338	Propithecus_coquereli
ENSCSAG00000002216	ALYREF	97	79.377	ENSPVAG00000017866	ALYREF	100	79.377	Pteropus_vampyrus
ENSCSAG00000002216	ALYREF	65	97.674	ENSRNOG00000036687	Alyref	91	97.674	Rattus_norvegicus
ENSCSAG00000002216	ALYREF	69	96.685	ENSRBIG00000039651	ALYREF	74	96.685	Rhinopithecus_bieti
ENSCSAG00000002216	ALYREF	88	92.241	ENSRROG00000045364	ALYREF	83	98.104	Rhinopithecus_roxellana
ENSCSAG00000002216	ALYREF	73	93.264	ENSSHAG00000010459	ALYREF	95	95.109	Sarcophilus_harrisii
ENSCSAG00000002216	ALYREF	97	52.158	ENSSDUG00000003992	-	100	53.381	Seriola_dumerili
ENSCSAG00000002216	ALYREF	97	53.091	ENSSLDG00000005386	-	100	53.957	Seriola_lalandi_dorsalis
ENSCSAG00000002216	ALYREF	97	82.443	ENSSPUG00000004600	ALYREF	100	80.534	Sphenodon_punctatus
ENSCSAG00000002216	ALYREF	97	68.459	ENSSPAG00000011178	ALYREF	97	70.251	Stegastes_partitus
ENSCSAG00000002216	ALYREF	97	98.054	ENSSSCG00000032655	ALYREF	100	98.054	Sus_scrofa
ENSCSAG00000002216	ALYREF	50	93.939	ENSTGUG00000003513	ALYREF	100	91.852	Taeniopygia_guttata
ENSCSAG00000002216	ALYREF	97	69.485	ENSTRUG00000008828	ALYREF	100	68.266	Takifugu_rubripes
ENSCSAG00000002216	ALYREF	67	96.067	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSCSAG00000002216	ALYREF	97	96.109	ENSTTRG00000012275	ALYREF	100	96.109	Tursiops_truncatus
ENSCSAG00000002216	ALYREF	67	83.051	ENSUAMG00000016931	ALYREF	66	81.356	Ursus_americanus
ENSCSAG00000002216	ALYREF	67	83.051	ENSUMAG00000016384	ALYREF	65	81.356	Ursus_maritimus
ENSCSAG00000002216	ALYREF	97	75.581	ENSXETG00000005391	alyref	100	73.745	Xenopus_tropicalis