EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000002881 (Gene tree)
Gene ID: 103233463
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 3155 bases
Position: chr5:74252703-74255857
Accession: 103233463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000015164	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000000900	PABPN1L-201	876	-	ENSCSAP00000015164	291 (aa)	XP_007992554	A0A0D9S2S5

Gene Model

Click here to download ENSCSAG00000002881's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03015	mRNA surveillance pathway	KEGG
csab05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000002881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000002881	PABPN1L	73	46.818	ENSCSAG00000016036	PABPN1	63	47.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000002881	PABPN1L	100	84.694	ENSG00000205022	PABPN1L	100	84.694	Homo_sapiens
ENSCSAG00000002881	PABPN1L	53	58.442	ENSACIG00000021400	PABPN1L	85	57.143	Amphilophus_citrinellus
ENSCSAG00000002881	PABPN1L	72	54.286	ENSACAG00000013250	PABPN1L	99	54.286	Anolis_carolinensis
ENSCSAG00000002881	PABPN1L	100	76.027	ENSANAG00000038178	PABPN1L	100	76.027	Aotus_nancymaae
ENSCSAG00000002881	PABPN1L	51	59.333	ENSACLG00000025147	PABPN1L	71	49.309	Astatotilapia_calliptera
ENSCSAG00000002881	PABPN1L	60	52.273	ENSAMXG00000010873	PABPN1L	71	50.244	Astyanax_mexicanus
ENSCSAG00000002881	PABPN1L	100	64.407	ENSBTAG00000023752	-	100	64.407	Bos_taurus
ENSCSAG00000002881	PABPN1L	100	76.712	ENSCJAG00000045284	PABPN1L	100	77.055	Callithrix_jacchus
ENSCSAG00000002881	PABPN1L	99	60.943	ENSCHIG00000013987	PABPN1L	100	58.065	Capra_hircus
ENSCSAG00000002881	PABPN1L	95	63.509	ENSCAPG00000007240	PABPN1L	100	63.509	Cavia_aperea
ENSCSAG00000002881	PABPN1L	100	65.292	ENSCPOG00000025951	PABPN1L	100	65.292	Cavia_porcellus
ENSCSAG00000002881	PABPN1L	100	79.452	ENSCCAG00000027631	PABPN1L	100	78.082	Cebus_capucinus
ENSCSAG00000002881	PABPN1L	100	91.065	ENSCATG00000031060	PABPN1L	100	91.065	Cercocebus_atys
ENSCSAG00000002881	PABPN1L	100	70.205	ENSCLAG00000000704	PABPN1L	100	68.493	Chinchilla_lanigera
ENSCSAG00000002881	PABPN1L	72	54.717	ENSCPBG00000023441	PABPN1L	61	56.808	Chrysemys_picta_bellii
ENSCSAG00000002881	PABPN1L	100	88.356	ENSCANG00000039336	PABPN1L	100	86.986	Colobus_angolensis_palliatus
ENSCSAG00000002881	PABPN1L	100	70.205	ENSCGRG00001013211	Pabpn1l	100	70.205	Cricetulus_griseus_chok1gshd
ENSCSAG00000002881	PABPN1L	100	70.205	ENSCGRG00000015868	Pabpn1l	100	70.205	Cricetulus_griseus_crigri
ENSCSAG00000002881	PABPN1L	100	56.000	ENSDNOG00000034677	PABPN1L	100	56.856	Dasypus_novemcinctus
ENSCSAG00000002881	PABPN1L	100	67.797	ENSEASG00005000777	PABPN1L	100	66.441	Equus_asinus_asinus
ENSCSAG00000002881	PABPN1L	100	68.475	ENSECAG00000000378	PABPN1L	100	67.119	Equus_caballus
ENSCSAG00000002881	PABPN1L	100	56.357	ENSEEUG00000004747	PABPN1L	100	56.357	Erinaceus_europaeus
ENSCSAG00000002881	PABPN1L	100	67.905	ENSFCAG00000010465	PABPN1L	100	67.119	Felis_catus
ENSCSAG00000002881	PABPN1L	74	53.456	ENSFALG00000003319	PABPN1L	80	53.456	Ficedula_albicollis
ENSCSAG00000002881	PABPN1L	100	67.466	ENSFDAG00000021067	PABPN1L	100	65.753	Fukomys_damarensis
ENSCSAG00000002881	PABPN1L	53	66.242	ENSGALG00000006242	PABPN1L	89	66.242	Gallus_gallus
ENSCSAG00000002881	PABPN1L	67	57.653	ENSGAGG00000010613	PABPN1L	59	57.143	Gopherus_agassizii
ENSCSAG00000002881	PABPN1L	100	87.629	ENSGGOG00000012670	PABPN1L	100	87.629	Gorilla_gorilla
ENSCSAG00000002881	PABPN1L	51	59.333	ENSHBUG00000002388	PABPN1L	71	49.309	Haplochromis_burtoni
ENSCSAG00000002881	PABPN1L	96	67.143	ENSHGLG00000014207	PABPN1L	100	66.429	Heterocephalus_glaber_female
ENSCSAG00000002881	PABPN1L	96	67.143	ENSHGLG00100005230	PABPN1L	100	66.429	Heterocephalus_glaber_male
ENSCSAG00000002881	PABPN1L	61	51.685	ENSIPUG00000023583	PABPN1L	90	51.759	Ictalurus_punctatus
ENSCSAG00000002881	PABPN1L	100	65.203	ENSSTOG00000020814	PABPN1L	100	64.407	Ictidomys_tridecemlineatus
ENSCSAG00000002881	PABPN1L	100	66.212	ENSJJAG00000006433	Pabpn1l	100	65.529	Jaculus_jaculus
ENSCSAG00000002881	PABPN1L	72	62.736	ENSLAFG00000025902	-	78	62.736	Loxodonta_africana
ENSCSAG00000002881	PABPN1L	100	91.409	ENSMFAG00000002924	PABPN1L	100	91.409	Macaca_fascicularis
ENSCSAG00000002881	PABPN1L	100	90.722	ENSMMUG00000012438	PABPN1L	100	90.722	Macaca_mulatta
ENSCSAG00000002881	PABPN1L	100	91.409	ENSMNEG00000044808	PABPN1L	100	91.409	Macaca_nemestrina
ENSCSAG00000002881	PABPN1L	100	92.096	ENSMLEG00000032667	PABPN1L	100	92.096	Mandrillus_leucophaeus
ENSCSAG00000002881	PABPN1L	51	59.333	ENSMZEG00005002186	PABPN1L	71	49.309	Maylandia_zebra
ENSCSAG00000002881	PABPN1L	100	66.667	ENSMAUG00000014032	Pabpn1l	100	67.354	Mesocricetus_auratus
ENSCSAG00000002881	PABPN1L	100	73.973	ENSMICG00000028179	PABPN1L	100	72.603	Microcebus_murinus
ENSCSAG00000002881	PABPN1L	100	65.068	ENSMOCG00000007955	Pabpn1l	100	64.384	Microtus_ochrogaster
ENSCSAG00000002881	PABPN1L	100	54.110	ENSMODG00000003873	-	100	54.110	Monodelphis_domestica
ENSCSAG00000002881	PABPN1L	100	64.041	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	63.356	Mus_caroli
ENSCSAG00000002881	PABPN1L	100	63.699	ENSMUSG00000069867	Pabpn1l	100	63.014	Mus_musculus
ENSCSAG00000002881	PABPN1L	100	64.384	MGP_PahariEiJ_G0023268	Pabpn1l	100	63.356	Mus_pahari
ENSCSAG00000002881	PABPN1L	100	63.356	MGP_SPRETEiJ_G0032788	Pabpn1l	100	62.671	Mus_spretus
ENSCSAG00000002881	PABPN1L	96	50.171	ENSMLUG00000003228	PABPN1L	95	50.171	Myotis_lucifugus
ENSCSAG00000002881	PABPN1L	100	70.548	ENSNGAG00000023992	Pabpn1l	100	68.836	Nannospalax_galili
ENSCSAG00000002881	PABPN1L	51	59.333	ENSNBRG00000017078	PABPN1L	64	56.522	Neolamprologus_brichardi
ENSCSAG00000002881	PABPN1L	100	67.235	ENSOPRG00000005597	PABPN1L	100	66.894	Ochotona_princeps
ENSCSAG00000002881	PABPN1L	100	60.328	ENSODEG00000004649	PABPN1L	100	60.000	Octodon_degus
ENSCSAG00000002881	PABPN1L	100	50.685	ENSOANG00000013901	PABPN1L	100	51.020	Ornithorhynchus_anatinus
ENSCSAG00000002881	PABPN1L	75	49.083	ENSORLG00000026560	PABPN1L	71	49.083	Oryzias_latipes
ENSCSAG00000002881	PABPN1L	75	49.083	ENSORLG00020015068	PABPN1L	71	49.083	Oryzias_latipes_hni
ENSCSAG00000002881	PABPN1L	75	49.083	ENSORLG00015000397	PABPN1L	71	49.083	Oryzias_latipes_hsok
ENSCSAG00000002881	PABPN1L	78	48.035	ENSOMEG00000017896	PABPN1L	51	48.848	Oryzias_melastigma
ENSCSAG00000002881	PABPN1L	100	72.014	ENSOGAG00000000433	PABPN1L	100	72.355	Otolemur_garnettii
ENSCSAG00000002881	PABPN1L	100	62.382	ENSOARG00000013682	PABPN1L	100	62.382	Ovis_aries
ENSCSAG00000002881	PABPN1L	100	85.374	ENSPPAG00000028866	PABPN1L	100	85.374	Pan_paniscus
ENSCSAG00000002881	PABPN1L	100	68.136	ENSPPRG00000015106	PABPN1L	100	68.136	Panthera_pardus
ENSCSAG00000002881	PABPN1L	93	61.172	ENSPTIG00000015606	PABPN1L	100	61.172	Panthera_tigris_altaica
ENSCSAG00000002881	PABPN1L	100	85.374	ENSPTRG00000031120	PABPN1L	100	85.374	Pan_troglodytes
ENSCSAG00000002881	PABPN1L	100	91.065	ENSPANG00000026039	PABPN1L	100	91.065	Papio_anubis
ENSCSAG00000002881	PABPN1L	72	53.774	ENSPSIG00000003404	PABPN1L	100	55.660	Pelodiscus_sinensis
ENSCSAG00000002881	PABPN1L	100	68.151	ENSPEMG00000016624	Pabpn1l	100	67.123	Peromyscus_maniculatus_bairdii
ENSCSAG00000002881	PABPN1L	100	85.714	ENSPPYG00000007655	PABPN1L	100	85.714	Pongo_abelii
ENSCSAG00000002881	PABPN1L	100	69.416	ENSPCOG00000024077	PABPN1L	100	69.521	Propithecus_coquereli
ENSCSAG00000002881	PABPN1L	100	65.772	ENSPVAG00000002716	PABPN1L	100	65.436	Pteropus_vampyrus
ENSCSAG00000002881	PABPN1L	51	59.333	ENSPNYG00000004803	PABPN1L	71	49.309	Pundamilia_nyererei
ENSCSAG00000002881	PABPN1L	100	67.808	ENSRNOG00000029558	Pabpn1l	100	66.781	Rattus_norvegicus
ENSCSAG00000002881	PABPN1L	100	90.034	ENSRBIG00000030740	PABPN1L	100	90.034	Rhinopithecus_bieti
ENSCSAG00000002881	PABPN1L	99	90.690	ENSRROG00000035483	-	99	90.690	Rhinopithecus_roxellana
ENSCSAG00000002881	PABPN1L	100	89.003	ENSRROG00000032240	-	100	89.003	Rhinopithecus_roxellana
ENSCSAG00000002881	PABPN1L	100	78.082	ENSSBOG00000018410	PABPN1L	100	77.740	Saimiri_boliviensis_boliviensis
ENSCSAG00000002881	PABPN1L	100	50.649	ENSSHAG00000010001	-	100	50.649	Sarcophilus_harrisii
ENSCSAG00000002881	PABPN1L	90	50.575	ENSSARG00000005178	-	96	49.618	Sorex_araneus
ENSCSAG00000002881	PABPN1L	71	57.416	ENSSPUG00000007031	PABPN1L	84	57.619	Sphenodon_punctatus
ENSCSAG00000002881	PABPN1L	54	58.282	ENSSPAG00000017978	PABPN1L	71	50.226	Stegastes_partitus
ENSCSAG00000002881	PABPN1L	100	64.527	ENSSSCG00000036367	PABPN1L	100	66.330	Sus_scrofa
ENSCSAG00000002881	PABPN1L	100	64.041	ENSTTRG00000004691	PABPN1L	100	65.085	Tursiops_truncatus
ENSCSAG00000002881	PABPN1L	62	50.265	ENSXETG00000011258	pabpn1l	96	48.729	Xenopus_tropicalis