EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000003486 (Gene tree)
Gene ID: 103243338
Gene Symbol: LSM12
Alias: FLJ30656
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 32957 bases
Position: chr16:62326740-62359696
Accession: 103243338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000014564	AD	PF09793.9	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000001514	LSM12-201	603	-	ENSCSAP00000014564	195 (aa)	XP_008010667	A0A0D9S125

Gene Model

Click here to download ENSCSAG00000003486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000003486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000003486	LSM12	100	99.487	ENSG00000161654	LSM12	100	99.487	Homo_sapiens
ENSCSAG00000003486	LSM12	100	86.735	ENSAPOG00000007907	lsm12b	100	86.735	Acanthochromis_polyacanthus
ENSCSAG00000003486	LSM12	100	97.475	ENSAMEG00000018321	LSM12	100	97.475	Ailuropoda_melanoleuca
ENSCSAG00000003486	LSM12	100	84.694	ENSACIG00000008538	lsm12b	100	84.694	Amphilophus_citrinellus
ENSCSAG00000003486	LSM12	100	86.224	ENSAOCG00000021847	lsm12b	88	86.224	Amphiprion_ocellaris
ENSCSAG00000003486	LSM12	100	86.224	ENSAPEG00000002252	lsm12b	100	86.224	Amphiprion_percula
ENSCSAG00000003486	LSM12	100	85.714	ENSATEG00000005705	lsm12b	100	85.714	Anabas_testudineus
ENSCSAG00000003486	LSM12	99	93.264	ENSACAG00000004618	LSM12	99	93.264	Anolis_carolinensis
ENSCSAG00000003486	LSM12	100	99.487	ENSANAG00000029011	LSM12	100	99.487	Aotus_nancymaae
ENSCSAG00000003486	LSM12	100	85.204	ENSACLG00000026332	lsm12b	100	85.204	Astatotilapia_calliptera
ENSCSAG00000003486	LSM12	100	78.571	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSCSAG00000003486	LSM12	100	84.694	ENSAMXG00000032952	lsm12b	100	84.694	Astyanax_mexicanus
ENSCSAG00000003486	LSM12	100	99.487	ENSBTAG00000016252	LSM12	100	99.487	Bos_taurus
ENSCSAG00000003486	LSM12	100	99.487	ENSCJAG00000048480	LSM12	100	99.487	Callithrix_jacchus
ENSCSAG00000003486	LSM12	100	99.487	ENSCAFG00000014379	LSM12	92	99.487	Canis_familiaris
ENSCSAG00000003486	LSM12	100	99.487	ENSCAFG00020012173	LSM12	100	99.487	Canis_lupus_dingo
ENSCSAG00000003486	LSM12	100	99.487	ENSCHIG00000018175	LSM12	100	99.487	Capra_hircus
ENSCSAG00000003486	LSM12	100	99.487	ENSTSYG00000036361	LSM12	100	99.487	Carlito_syrichta
ENSCSAG00000003486	LSM12	83	93.827	ENSCAPG00000009647	LSM12	89	93.827	Cavia_aperea
ENSCSAG00000003486	LSM12	100	97.436	ENSCPOG00000012860	LSM12	100	97.436	Cavia_porcellus
ENSCSAG00000003486	LSM12	100	99.487	ENSCCAG00000032905	LSM12	100	99.487	Cebus_capucinus
ENSCSAG00000003486	LSM12	100	99.487	ENSCATG00000030577	-	100	99.487	Cercocebus_atys
ENSCSAG00000003486	LSM12	100	98.462	ENSCLAG00000015759	LSM12	100	98.462	Chinchilla_lanigera
ENSCSAG00000003486	LSM12	56	98.165	ENSCHOG00000001198	LSM12	100	98.165	Choloepus_hoffmanni
ENSCSAG00000003486	LSM12	99	93.782	ENSCPBG00000027105	LSM12	99	93.782	Chrysemys_picta_bellii
ENSCSAG00000003486	LSM12	100	99.487	ENSCANG00000043328	LSM12	100	99.487	Colobus_angolensis_palliatus
ENSCSAG00000003486	LSM12	100	99.487	ENSCGRG00001002094	Lsm12	100	99.487	Cricetulus_griseus_chok1gshd
ENSCSAG00000003486	LSM12	86	92.262	ENSCGRG00000004316	Lsm12	95	92.262	Cricetulus_griseus_crigri
ENSCSAG00000003486	LSM12	100	85.204	ENSCSEG00000008434	lsm12b	100	85.204	Cynoglossus_semilaevis
ENSCSAG00000003486	LSM12	100	85.204	ENSCVAG00000008755	lsm12b	100	85.204	Cyprinodon_variegatus
ENSCSAG00000003486	LSM12	100	85.204	ENSDARG00000109510	lsm12b	100	85.204	Danio_rerio
ENSCSAG00000003486	LSM12	100	76.531	ENSDARG00000028848	lsm12a	100	76.531	Danio_rerio
ENSCSAG00000003486	LSM12	100	98.974	ENSDNOG00000002418	LSM12	91	98.974	Dasypus_novemcinctus
ENSCSAG00000003486	LSM12	100	99.487	ENSDORG00000016381	Lsm12	100	99.487	Dipodomys_ordii
ENSCSAG00000003486	LSM12	83	33.133	FBgn0030364	Lsm12	76	32.934	Drosophila_melanogaster
ENSCSAG00000003486	LSM12	74	31.646	FBgn0036057	CG14164	83	31.646	Drosophila_melanogaster
ENSCSAG00000003486	LSM12	90	87.429	ENSETEG00000011012	-	100	87.429	Echinops_telfairi
ENSCSAG00000003486	LSM12	100	98.974	ENSETEG00000008374	LSM12	100	98.974	Echinops_telfairi
ENSCSAG00000003486	LSM12	84	63.415	ENSEBUG00000016299	lsm12a	92	63.415	Eptatretus_burgeri
ENSCSAG00000003486	LSM12	100	99.487	ENSEASG00005010155	LSM12	100	99.487	Equus_asinus_asinus
ENSCSAG00000003486	LSM12	100	99.487	ENSECAG00000009071	LSM12	100	99.487	Equus_caballus
ENSCSAG00000003486	LSM12	78	98.039	ENSEEUG00000002419	-	100	98.039	Erinaceus_europaeus
ENSCSAG00000003486	LSM12	100	82.653	ENSELUG00000000256	-	100	82.653	Esox_lucius
ENSCSAG00000003486	LSM12	100	84.694	ENSELUG00000015538	lsm12b	100	80.102	Esox_lucius
ENSCSAG00000003486	LSM12	100	99.487	ENSFCAG00000037021	LSM12	100	99.487	Felis_catus
ENSCSAG00000003486	LSM12	76	98.649	ENSFDAG00000008954	LSM12	87	98.649	Fukomys_damarensis
ENSCSAG00000003486	LSM12	100	84.184	ENSFHEG00000019913	lsm12b	100	84.184	Fundulus_heteroclitus
ENSCSAG00000003486	LSM12	81	84.810	ENSGMOG00000015449	lsm12b	100	84.810	Gadus_morhua
ENSCSAG00000003486	LSM12	78	93.464	ENSGALG00000039803	LSM12	100	93.464	Gallus_gallus
ENSCSAG00000003486	LSM12	100	84.694	ENSGAFG00000011829	lsm12b	100	84.694	Gambusia_affinis
ENSCSAG00000003486	LSM12	81	85.443	ENSGACG00000003428	lsm12b	100	85.443	Gasterosteus_aculeatus
ENSCSAG00000003486	LSM12	99	93.782	ENSGAGG00000021965	LSM12	99	93.782	Gopherus_agassizii
ENSCSAG00000003486	LSM12	100	99.487	ENSGGOG00000010589	-	100	99.487	Gorilla_gorilla
ENSCSAG00000003486	LSM12	85	85.629	ENSHBUG00000007667	lsm12b	74	85.629	Haplochromis_burtoni
ENSCSAG00000003486	LSM12	100	99.487	ENSHGLG00000011411	LSM12	100	99.487	Heterocephalus_glaber_female
ENSCSAG00000003486	LSM12	91	86.740	ENSHGLG00100000241	LSM12	96	86.740	Heterocephalus_glaber_male
ENSCSAG00000003486	LSM12	100	84.694	ENSHCOG00000002094	lsm12b	100	84.694	Hippocampus_comes
ENSCSAG00000003486	LSM12	99	75.773	ENSIPUG00000008936	lsm12a	99	75.773	Ictalurus_punctatus
ENSCSAG00000003486	LSM12	100	85.204	ENSIPUG00000014800	lsm12	100	85.204	Ictalurus_punctatus
ENSCSAG00000003486	LSM12	100	99.487	ENSSTOG00000007403	LSM12	100	99.487	Ictidomys_tridecemlineatus
ENSCSAG00000003486	LSM12	100	98.462	ENSJJAG00000004364	-	100	98.462	Jaculus_jaculus
ENSCSAG00000003486	LSM12	81	84.906	ENSJJAG00000014652	-	95	84.906	Jaculus_jaculus
ENSCSAG00000003486	LSM12	97	87.368	ENSJJAG00000011793	-	100	87.368	Jaculus_jaculus
ENSCSAG00000003486	LSM12	86	86.310	ENSKMAG00000007704	lsm12b	57	86.310	Kryptolebias_marmoratus
ENSCSAG00000003486	LSM12	100	86.224	ENSLBEG00000027999	lsm12b	100	86.224	Labrus_bergylta
ENSCSAG00000003486	LSM12	99	89.637	ENSLACG00000015981	LSM12	99	89.637	Latimeria_chalumnae
ENSCSAG00000003486	LSM12	100	84.184	ENSLOCG00000013079	lsm12b	99	84.184	Lepisosteus_oculatus
ENSCSAG00000003486	LSM12	100	99.487	ENSLAFG00000005202	LSM12	100	99.487	Loxodonta_africana
ENSCSAG00000003486	LSM12	100	99.487	ENSMFAG00000031376	LSM12	100	99.487	Macaca_fascicularis
ENSCSAG00000003486	LSM12	65	85.057	ENSMMUG00000038408	-	100	85.057	Macaca_mulatta
ENSCSAG00000003486	LSM12	100	99.487	ENSMMUG00000006804	LSM12	100	99.487	Macaca_mulatta
ENSCSAG00000003486	LSM12	65	85.057	ENSMMUG00000042106	-	100	85.057	Macaca_mulatta
ENSCSAG00000003486	LSM12	100	99.487	ENSMNEG00000030594	-	100	99.487	Macaca_nemestrina
ENSCSAG00000003486	LSM12	100	99.487	ENSMLEG00000039934	LSM12	100	99.487	Mandrillus_leucophaeus
ENSCSAG00000003486	LSM12	100	85.714	ENSMAMG00000004279	lsm12b	100	85.714	Mastacembelus_armatus
ENSCSAG00000003486	LSM12	100	85.204	ENSMZEG00005005754	lsm12b	100	85.204	Maylandia_zebra
ENSCSAG00000003486	LSM12	100	100.000	ENSMICG00000037219	LSM12	100	100.000	Microcebus_murinus
ENSCSAG00000003486	LSM12	100	99.487	ENSMOCG00000019878	-	100	99.487	Microtus_ochrogaster
ENSCSAG00000003486	LSM12	100	83.590	ENSMOCG00000017015	-	86	83.590	Microtus_ochrogaster
ENSCSAG00000003486	LSM12	100	85.714	ENSMMOG00000020848	lsm12b	100	85.714	Mola_mola
ENSCSAG00000003486	LSM12	100	85.714	ENSMALG00000007578	lsm12b	100	85.714	Monopterus_albus
ENSCSAG00000003486	LSM12	100	98.974	MGP_CAROLIEiJ_G0017241	Lsm12	100	98.974	Mus_caroli
ENSCSAG00000003486	LSM12	100	99.487	ENSMUSG00000020922	Lsm12	100	99.487	Mus_musculus
ENSCSAG00000003486	LSM12	100	91.509	MGP_PahariEiJ_G0018371	Lsm12	100	91.509	Mus_pahari
ENSCSAG00000003486	LSM12	100	98.974	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSCSAG00000003486	LSM12	100	98.974	ENSMLUG00000006391	LSM12	100	98.974	Myotis_lucifugus
ENSCSAG00000003486	LSM12	100	66.832	ENSNGAG00000015429	-	100	66.832	Nannospalax_galili
ENSCSAG00000003486	LSM12	100	99.487	ENSNGAG00000001870	Lsm12	100	99.487	Nannospalax_galili
ENSCSAG00000003486	LSM12	100	85.204	ENSNBRG00000006266	lsm12b	100	85.204	Neolamprologus_brichardi
ENSCSAG00000003486	LSM12	100	99.487	ENSNLEG00000005580	-	100	99.487	Nomascus_leucogenys
ENSCSAG00000003486	LSM12	85	98.182	ENSMEUG00000007501	-	100	98.182	Notamacropus_eugenii
ENSCSAG00000003486	LSM12	100	99.487	ENSOPRG00000008552	LSM12	100	99.487	Ochotona_princeps
ENSCSAG00000003486	LSM12	100	88.205	ENSODEG00000007886	-	74	88.205	Octodon_degus
ENSCSAG00000003486	LSM12	100	97.949	ENSODEG00000017998	-	100	97.949	Octodon_degus
ENSCSAG00000003486	LSM12	100	85.204	ENSONIG00000007933	lsm12b	100	85.204	Oreochromis_niloticus
ENSCSAG00000003486	LSM12	100	97.475	ENSOCUG00000008566	-	100	97.475	Oryctolagus_cuniculus
ENSCSAG00000003486	LSM12	99	92.784	ENSOCUG00000027889	-	100	92.784	Oryctolagus_cuniculus
ENSCSAG00000003486	LSM12	99	91.753	ENSOCUG00000024823	-	100	91.753	Oryctolagus_cuniculus
ENSCSAG00000003486	LSM12	99	92.784	ENSOCUG00000021254	-	100	92.784	Oryctolagus_cuniculus
ENSCSAG00000003486	LSM12	100	85.714	ENSORLG00000011310	lsm12b	100	85.714	Oryzias_latipes
ENSCSAG00000003486	LSM12	100	85.714	ENSORLG00020002060	lsm12b	92	85.714	Oryzias_latipes_hni
ENSCSAG00000003486	LSM12	100	85.714	ENSORLG00015001647	lsm12b	92	85.714	Oryzias_latipes_hsok
ENSCSAG00000003486	LSM12	100	85.714	ENSOMEG00000006184	lsm12b	92	85.714	Oryzias_melastigma
ENSCSAG00000003486	LSM12	100	100.000	ENSOGAG00000010489	LSM12	100	100.000	Otolemur_garnettii
ENSCSAG00000003486	LSM12	100	96.020	ENSOARG00000006589	LSM12	100	96.020	Ovis_aries
ENSCSAG00000003486	LSM12	100	89.231	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSCSAG00000003486	LSM12	100	99.487	ENSPPRG00000023420	LSM12	100	99.487	Panthera_pardus
ENSCSAG00000003486	LSM12	73	95.495	ENSPTIG00000014850	-	100	95.495	Panthera_tigris_altaica
ENSCSAG00000003486	LSM12	78	99.346	ENSPTIG00000012704	-	82	99.346	Panthera_tigris_altaica
ENSCSAG00000003486	LSM12	100	99.487	ENSPTRG00000009261	LSM12	100	99.487	Pan_troglodytes
ENSCSAG00000003486	LSM12	100	99.487	ENSPANG00000021315	-	100	99.487	Papio_anubis
ENSCSAG00000003486	LSM12	100	85.714	ENSPKIG00000021058	lsm12b	100	85.714	Paramormyrops_kingsleyae
ENSCSAG00000003486	LSM12	99	76.289	ENSPKIG00000017932	-	99	76.289	Paramormyrops_kingsleyae
ENSCSAG00000003486	LSM12	100	85.204	ENSPMGG00000021344	lsm12b	100	85.204	Periophthalmus_magnuspinnatus
ENSCSAG00000003486	LSM12	100	99.487	ENSPEMG00000012199	Lsm12	100	99.487	Peromyscus_maniculatus_bairdii
ENSCSAG00000003486	LSM12	88	66.279	ENSPMAG00000005461	lsm12a	99	66.279	Petromyzon_marinus
ENSCSAG00000003486	LSM12	100	96.410	ENSPCIG00000020244	LSM12	100	96.410	Phascolarctos_cinereus
ENSCSAG00000003486	LSM12	100	83.673	ENSPFOG00000015930	lsm12b	100	83.673	Poecilia_formosa
ENSCSAG00000003486	LSM12	100	83.673	ENSPLAG00000021089	lsm12b	100	83.673	Poecilia_latipinna
ENSCSAG00000003486	LSM12	100	83.673	ENSPMEG00000012961	lsm12b	100	83.673	Poecilia_mexicana
ENSCSAG00000003486	LSM12	88	85.965	ENSPREG00000010236	lsm12b	95	85.965	Poecilia_reticulata
ENSCSAG00000003486	LSM12	100	99.487	ENSPPYG00000008344	LSM12	100	99.487	Pongo_abelii
ENSCSAG00000003486	LSM12	82	99.371	ENSPCAG00000008790	LSM12	100	99.371	Procavia_capensis
ENSCSAG00000003486	LSM12	100	99.487	ENSPCOG00000027951	LSM12	100	99.487	Propithecus_coquereli
ENSCSAG00000003486	LSM12	100	98.974	ENSPVAG00000013706	LSM12	100	98.974	Pteropus_vampyrus
ENSCSAG00000003486	LSM12	100	85.204	ENSPNYG00000003386	lsm12b	100	85.204	Pundamilia_nyererei
ENSCSAG00000003486	LSM12	100	83.163	ENSPNAG00000004186	lsm12b	100	83.163	Pygocentrus_nattereri
ENSCSAG00000003486	LSM12	100	76.531	ENSPNAG00000018435	lsm12a	100	76.531	Pygocentrus_nattereri
ENSCSAG00000003486	LSM12	100	99.487	ENSRNOG00000020894	Lsm12	100	99.487	Rattus_norvegicus
ENSCSAG00000003486	LSM12	100	99.487	ENSRBIG00000027910	LSM12	100	99.487	Rhinopithecus_bieti
ENSCSAG00000003486	LSM12	100	99.487	ENSRROG00000045530	-	100	99.487	Rhinopithecus_roxellana
ENSCSAG00000003486	LSM12	100	60.000	ENSRROG00000000537	-	100	60.000	Rhinopithecus_roxellana
ENSCSAG00000003486	LSM12	100	99.487	ENSSBOG00000025310	LSM12	100	99.487	Saimiri_boliviensis_boliviensis
ENSCSAG00000003486	LSM12	81	93.671	ENSSHAG00000014914	LSM12	100	93.671	Sarcophilus_harrisii
ENSCSAG00000003486	LSM12	100	83.673	ENSSFOG00015020392	lsm12a	100	83.673	Scleropages_formosus
ENSCSAG00000003486	LSM12	100	85.714	ENSSFOG00015009612	lsm12	100	85.714	Scleropages_formosus
ENSCSAG00000003486	LSM12	100	85.714	ENSSMAG00000008089	lsm12b	100	85.714	Scophthalmus_maximus
ENSCSAG00000003486	LSM12	100	86.735	ENSSDUG00000012711	lsm12b	100	86.735	Seriola_dumerili
ENSCSAG00000003486	LSM12	100	86.735	ENSSLDG00000007404	lsm12b	100	86.735	Seriola_lalandi_dorsalis
ENSCSAG00000003486	LSM12	78	98.693	ENSSARG00000005537	LSM12	100	98.693	Sorex_araneus
ENSCSAG00000003486	LSM12	99	95.337	ENSSPUG00000011984	LSM12	99	95.337	Sphenodon_punctatus
ENSCSAG00000003486	LSM12	100	86.224	ENSSPAG00000017058	lsm12b	100	86.224	Stegastes_partitus
ENSCSAG00000003486	LSM12	100	99.487	ENSSSCG00000032394	LSM12	100	99.487	Sus_scrofa
ENSCSAG00000003486	LSM12	100	84.694	ENSTRUG00000007121	lsm12b	100	84.694	Takifugu_rubripes
ENSCSAG00000003486	LSM12	100	85.204	ENSTNIG00000014436	lsm12b	100	85.204	Tetraodon_nigroviridis
ENSCSAG00000003486	LSM12	100	98.974	ENSTBEG00000012523	-	100	98.974	Tupaia_belangeri
ENSCSAG00000003486	LSM12	100	95.897	ENSTBEG00000012392	-	100	95.897	Tupaia_belangeri
ENSCSAG00000003486	LSM12	100	99.487	ENSTTRG00000010433	LSM12	100	99.487	Tursiops_truncatus
ENSCSAG00000003486	LSM12	100	99.487	ENSUAMG00000006313	LSM12	100	99.487	Ursus_americanus
ENSCSAG00000003486	LSM12	81	96.203	ENSUMAG00000012987	LSM12	90	96.203	Ursus_maritimus
ENSCSAG00000003486	LSM12	100	94.872	ENSVPAG00000011145	LSM12	100	94.872	Vicugna_pacos
ENSCSAG00000003486	LSM12	100	99.487	ENSVVUG00000017581	LSM12	100	99.487	Vulpes_vulpes
ENSCSAG00000003486	LSM12	82	65.000	ENSXETG00000003371	lsm12	77	65.000	Xenopus_tropicalis
ENSCSAG00000003486	LSM12	100	84.694	ENSXCOG00000003994	lsm12b	100	84.694	Xiphophorus_couchianus
ENSCSAG00000003486	LSM12	100	84.694	ENSXMAG00000020950	lsm12b	100	84.694	Xiphophorus_maculatus