EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAG00000003729 (Gene tree)
Gene ID
103236189
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Chlorocebus_sabaeus
Status
putative
Strand
Minus strand
Length
219535 bases
Position
chr7:67987359-68206893
Accession
103236189
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAP00000000098zf-C2H2PF00096.262e-60110
ENSCSAP00000000098zf-C2H2PF00096.262e-60210
ENSCSAP00000000098zf-C2H2PF00096.262e-60310
ENSCSAP00000000098zf-C2H2PF00096.262e-60410
ENSCSAP00000000098zf-C2H2PF00096.262e-60510
ENSCSAP00000000098zf-C2H2PF00096.262e-60610
ENSCSAP00000000098zf-C2H2PF00096.262e-60710
ENSCSAP00000000098zf-C2H2PF00096.262e-60810
ENSCSAP00000000098zf-C2H2PF00096.262e-60910
ENSCSAP00000000098zf-C2H2PF00096.262e-601010
ENSCSAP00000000098zf-metPF12874.75.7e-2013
ENSCSAP00000000098zf-metPF12874.75.7e-2023
ENSCSAP00000000098zf-metPF12874.75.7e-2033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAT00000001758PRDM5-2013629-ENSCSAP00000000098599 (aa)XP_007997868A0A0D9QUQ9
Gene Model
Click here to download ENSCSAG00000003729's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000003729's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAG00000003729PRDM57737.736ENSCSAG00000005405ZNF4239937.736
ENSCSAG00000003729PRDM57435.656ENSCSAG00000006632ZNF7919836.842
ENSCSAG00000003729PRDM57135.574ENSCSAG00000003326ZNF2336635.574
ENSCSAG00000003729PRDM57236.705ENSCSAG00000003345ZNF1557936.705
ENSCSAG00000003729PRDM57538.303ENSCSAG00000001938ZNF8458338.303
ENSCSAG00000003729PRDM59442.353ENSCSAG00000014756PRDM126842.353
ENSCSAG00000003729PRDM57244.048ENSCSAG00000017407ZNF26944.048
ENSCSAG00000003729PRDM56930.268ENSCSAG00000019619ZNF5268230.268
ENSCSAG00000003729PRDM57340.102ENSCSAG00000003334ZNF2259638.249
ENSCSAG00000003729PRDM57137.931ENSCSAG00000005600ZNF2677437.931
ENSCSAG00000003729PRDM57238.400ENSCSAG00000003323ZNF2357438.400
ENSCSAG00000003729PRDM57137.656ENSCSAG00000003321ZNF1128337.656
ENSCSAG00000003729PRDM57240.460ENSCSAG00000003329ZNF2267440.460
ENSCSAG00000003729PRDM58043.655ENSCSAG00000001629ZNF5506543.655
ENSCSAG00000003729PRDM56140.496ENSCSAG00000000974ZNF6836940.496
ENSCSAG00000003729PRDM56844.340ENSCSAG00000003047SNAI35144.340
ENSCSAG00000003729PRDM57338.235ENSCSAG00000006686ZNF7007837.215
ENSCSAG00000003729PRDM57335.433ENSCSAG00000007764ZNF3177035.433
ENSCSAG00000003729PRDM57444.737ENSCSAG00000018240ZNF2366937.069
ENSCSAG00000003729PRDM57439.350ENSCSAG00000001956-7539.350
ENSCSAG00000003729PRDM57140.072ENSCSAG00000004185-9440.072
ENSCSAG00000003729PRDM57536.908ENSCSAG00000014798-8536.908
ENSCSAG00000003729PRDM56643.137ENSCSAG00000015065SNAI15143.137
ENSCSAG00000003729PRDM57241.146ENSCSAG00000019655ZNF6286040.933
ENSCSAG00000003729PRDM57638.136ENSCSAG00000019650-8238.136
ENSCSAG00000003729PRDM57238.889ENSCSAG00000000471-9938.889
ENSCSAG00000003729PRDM58040.000ENSCSAG00000001958ZNF4687039.867
ENSCSAG00000003729PRDM57539.643ENSCSAG00000001992ZNF8368838.554
ENSCSAG00000003729PRDM57539.679ENSCSAG00000004194ZNF8509139.679
ENSCSAG00000003729PRDM56540.876ENSCSAG00000014787SNAI26440.876
ENSCSAG00000003729PRDM57144.099ENSCSAG00000003718ZFP16944.099
ENSCSAG00000003729PRDM57240.942ENSCSAG00000005878ZNF7685542.105
ENSCSAG00000003729PRDM57437.183ENSCSAG00000001970ZNF287240.719
ENSCSAG00000003729PRDM57539.206ENSCSAG00000001973ZNF837139.206
ENSCSAG00000003729PRDM57638.462ENSCSAG00000001974ZNF8088337.037
ENSCSAG00000003729PRDM57439.189ENSCSAG00000001670ZNF5826139.189
ENSCSAG00000003729PRDM58238.955ENSCSAG00000018533ZNF3459238.955
ENSCSAG00000003729PRDM57236.913ENSCSAG00000006110MAZ8237.209
ENSCSAG00000003729PRDM57238.643ENSCSAG00000001955-7038.643
ENSCSAG00000003729PRDM57131.920ENSCSAG00000018864ZNF3198631.785
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAG00000003729PRDM510099.499ENSG00000138738PRDM510099.499Homo_sapiens
ENSCSAG00000003729PRDM510080.200ENSAPOG00000023220prdm510081.032Acanthochromis_polyacanthus
ENSCSAG00000003729PRDM59188.112ENSAMEG00000003050PRDM510088.287Ailuropoda_melanoleuca
ENSCSAG00000003729PRDM510079.000ENSACIG00000000406prdm510079.500Amphilophus_citrinellus
ENSCSAG00000003729PRDM510081.000ENSAOCG00000014806prdm510081.833Amphiprion_ocellaris
ENSCSAG00000003729PRDM510071.820ENSAPEG00000016846prdm510073.752Amphiprion_percula
ENSCSAG00000003729PRDM510081.333ENSATEG00000013829prdm510081.833Anabas_testudineus
ENSCSAG00000003729PRDM59581.395ENSAPLG00000013828PRDM510081.395Anas_platyrhynchos
ENSCSAG00000003729PRDM510076.508ENSACAG00000012999PRDM510076.508Anolis_carolinensis
ENSCSAG00000003729PRDM510099.333ENSANAG00000027411PRDM510099.333Aotus_nancymaae
ENSCSAG00000003729PRDM510081.167ENSACLG00000017996prdm510082.167Astatotilapia_calliptera
ENSCSAG00000003729PRDM58374.859ENSAMXG00000041864prdm59876.173Astyanax_mexicanus
ENSCSAG00000003729PRDM510091.587ENSBTAG00000012111PRDM510091.587Bos_taurus
ENSCSAG00000003729PRDM510099.051ENSCJAG00000003133PRDM510098.667Callithrix_jacchus
ENSCSAG00000003729PRDM59187.703ENSCAFG00000004179PRDM59687.703Canis_familiaris
ENSCSAG00000003729PRDM510097.663ENSCAFG00020017685PRDM510097.663Canis_lupus_dingo
ENSCSAG00000003729PRDM510095.993ENSCHIG00000018772PRDM510095.993Capra_hircus
ENSCSAG00000003729PRDM59497.276ENSTSYG00000009630PRDM59497.276Carlito_syrichta
ENSCSAG00000003729PRDM59890.756ENSCAPG00000015217PRDM510098.667Cavia_aperea
ENSCSAG00000003729PRDM59598.734ENSCPOG00000012883PRDM510098.667Cavia_porcellus
ENSCSAG00000003729PRDM510099.367ENSCCAG00000023157PRDM510099.333Cebus_capucinus
ENSCSAG00000003729PRDM510099.684ENSCATG00000042510PRDM510099.666Cercocebus_atys
ENSCSAG00000003729PRDM59598.734ENSCLAG00000005392PRDM510098.667Chinchilla_lanigera
ENSCSAG00000003729PRDM59994.064ENSCHOG00000007801PRDM59188.112Choloepus_hoffmanni
ENSCSAG00000003729PRDM510080.751ENSCPBG00000024735PRDM510080.908Chrysemys_picta_bellii
ENSCSAG00000003729PRDM510099.684ENSCANG00000036807PRDM510099.666Colobus_angolensis_palliatus
ENSCSAG00000003729PRDM510097.468ENSCGRG00001010581Prdm510096.000Cricetulus_griseus_chok1gshd
ENSCSAG00000003729PRDM59585.464ENSCGRG00000010996-9985.464Cricetulus_griseus_crigri
ENSCSAG00000003729PRDM510080.500ENSCSEG00000019979prdm510081.500Cynoglossus_semilaevis
ENSCSAG00000003729PRDM510072.900ENSCVAG00000013692prdm510073.376Cyprinodon_variegatus
ENSCSAG00000003729PRDM59975.637ENSDARG00000006288prdm59975.796Danio_rerio
ENSCSAG00000003729PRDM59192.174ENSDNOG00000002009PRDM510092.348Dasypus_novemcinctus
ENSCSAG00000003729PRDM510097.785ENSDORG00000007739Prdm57697.785Dipodomys_ordii
ENSCSAG00000003729PRDM59387.402ENSETEG00000020268PRDM59087.402Echinops_telfairi
ENSCSAG00000003729PRDM59971.714ENSEBUG00000004301prdm510072.074Eptatretus_burgeri
ENSCSAG00000003729PRDM510099.367ENSEASG00005018365PRDM510098.667Equus_asinus_asinus
ENSCSAG00000003729PRDM59997.076ENSECAG00000011516PRDM58997.076Equus_caballus
ENSCSAG00000003729PRDM510071.125ENSECAG00000024747-10084.969Equus_caballus
ENSCSAG00000003729PRDM59987.153ENSEEUG00000010306PRDM510087.153Erinaceus_europaeus
ENSCSAG00000003729PRDM59974.770ENSELUG00000005894prdm59375.322Esox_lucius
ENSCSAG00000003729PRDM510097.663ENSFCAG00000025656PRDM510097.663Felis_catus
ENSCSAG00000003729PRDM59973.209ENSFALG00000008381PRDM510073.209Ficedula_albicollis
ENSCSAG00000003729PRDM510099.051ENSFDAG00000021361PRDM510098.667Fukomys_damarensis
ENSCSAG00000003729PRDM59981.376ENSFHEG00000013040prdm59982.215Fundulus_heteroclitus
ENSCSAG00000003729PRDM510069.079ENSGMOG00000012038prdm510069.079Gadus_morhua
ENSCSAG00000003729PRDM510081.675ENSGALG00000011963PRDM510081.675Gallus_gallus
ENSCSAG00000003729PRDM510077.667ENSGAFG00000019233prdm510078.000Gambusia_affinis
ENSCSAG00000003729PRDM59978.544ENSGAGG00000020362PRDM59978.736Gopherus_agassizii
ENSCSAG00000003729PRDM510099.684ENSGGOG00000013562PRDM510099.499Gorilla_gorilla
ENSCSAG00000003729PRDM510081.167ENSHBUG00000023375prdm510081.667Haplochromis_burtoni
ENSCSAG00000003729PRDM510087.980ENSHGLG00000003010PRDM510092.154Heterocephalus_glaber_female
ENSCSAG00000003729PRDM510098.734ENSHGLG00100003696PRDM510098.667Heterocephalus_glaber_male
ENSCSAG00000003729PRDM510075.949ENSHCOG00000012131prdm59976.862Hippocampus_comes
ENSCSAG00000003729PRDM510081.167ENSIPUG00000001248prdm510081.500Ictalurus_punctatus
ENSCSAG00000003729PRDM59594.620ENSSTOG00000004741PRDM510094.667Ictidomys_tridecemlineatus
ENSCSAG00000003729PRDM59598.101ENSJJAG00000011464Prdm510098.000Jaculus_jaculus
ENSCSAG00000003729PRDM510081.667ENSKMAG00000013663prdm510081.833Kryptolebias_marmoratus
ENSCSAG00000003729PRDM510077.179ENSLBEG00000022736prdm510077.179Labrus_bergylta
ENSCSAG00000003729PRDM59179.549ENSLACG00000009187PRDM59980.069Latimeria_chalumnae
ENSCSAG00000003729PRDM510077.460ENSLOCG00000009778prdm59977.619Lepisosteus_oculatus
ENSCSAG00000003729PRDM510097.329ENSLAFG00000006532PRDM510097.329Loxodonta_africana
ENSCSAG00000003729PRDM510099.833ENSMFAG00000045845PRDM510099.833Macaca_fascicularis
ENSCSAG00000003729PRDM510099.684ENSMMUG00000003249PRDM510099.666Macaca_mulatta
ENSCSAG00000003729PRDM510099.833ENSMNEG00000019018PRDM510099.833Macaca_nemestrina
ENSCSAG00000003729PRDM59599.648ENSMLEG00000023145PRDM510099.648Mandrillus_leucophaeus
ENSCSAG00000003729PRDM510078.905ENSMAMG00000013419prdm510079.388Mastacembelus_armatus
ENSCSAG00000003729PRDM510081.167ENSMZEG00005020645prdm510081.667Maylandia_zebra
ENSCSAG00000003729PRDM59581.063ENSMGAG00000010710PRDM510081.063Meleagris_gallopavo
ENSCSAG00000003729PRDM510097.468ENSMAUG00000006768Prdm510096.000Mesocricetus_auratus
ENSCSAG00000003729PRDM510098.734ENSMICG00000001459PRDM510098.667Microcebus_murinus
ENSCSAG00000003729PRDM510097.468ENSMOCG00000016267Prdm510096.000Microtus_ochrogaster
ENSCSAG00000003729PRDM510081.667ENSMMOG00000006035prdm510081.667Mola_mola
ENSCSAG00000003729PRDM510078.041ENSMODG00000018942PRDM510077.848Monodelphis_domestica
ENSCSAG00000003729PRDM510078.000ENSMALG00000013934prdm510078.369Monopterus_albus
ENSCSAG00000003729PRDM510097.785MGP_CAROLIEiJ_G0028463Prdm510096.667Mus_caroli
ENSCSAG00000003729PRDM510097.468ENSMUSG00000029913Prdm510096.667Mus_musculus
ENSCSAG00000003729PRDM510097.785MGP_PahariEiJ_G0022203Prdm510096.667Mus_pahari
ENSCSAG00000003729PRDM510097.468MGP_SPRETEiJ_G0029467Prdm510096.667Mus_spretus
ENSCSAG00000003729PRDM510092.540ENSMPUG00000017415PRDM510092.540Mustela_putorius_furo
ENSCSAG00000003729PRDM59181.661ENSMLUG00000006097PRDM510081.661Myotis_lucifugus
ENSCSAG00000003729PRDM510098.101ENSNGAG00000018317Prdm510096.667Nannospalax_galili
ENSCSAG00000003729PRDM510072.250ENSNBRG00000004976prdm510078.239Neolamprologus_brichardi
ENSCSAG00000003729PRDM510099.684ENSNLEG00000009107PRDM510099.333Nomascus_leucogenys
ENSCSAG00000003729PRDM58389.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSCSAG00000003729PRDM59597.338ENSOPRG00000011066-8972.371Ochotona_princeps
ENSCSAG00000003729PRDM59999.051ENSODEG00000009133PRDM510098.667Octodon_degus
ENSCSAG00000003729PRDM510077.338ENSONIG00000003111prdm59977.655Oreochromis_niloticus
ENSCSAG00000003729PRDM57186.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSCSAG00000003729PRDM59981.893ENSOANG00000015109PRDM59781.893Ornithorhynchus_anatinus
ENSCSAG00000003729PRDM59383.986ENSOCUG00000013454PRDM510085.690Oryctolagus_cuniculus
ENSCSAG00000003729PRDM510081.333ENSORLG00000016247prdm510081.500Oryzias_latipes
ENSCSAG00000003729PRDM510081.000ENSORLG00020018051prdm510081.167Oryzias_latipes_hni
ENSCSAG00000003729PRDM510081.333ENSORLG00015013760prdm510081.500Oryzias_latipes_hsok
ENSCSAG00000003729PRDM510081.531ENSOMEG00000005143prdm510081.697Oryzias_melastigma
ENSCSAG00000003729PRDM58383.427ENSOGAG00000009996PRDM59885.047Otolemur_garnettii
ENSCSAG00000003729PRDM59488.525ENSOARG00000015473PRDM510088.403Ovis_aries
ENSCSAG00000003729PRDM59499.416ENSPPAG00000043045PRDM510099.416Pan_paniscus
ENSCSAG00000003729PRDM510097.663ENSPPRG00000001020PRDM510097.663Panthera_pardus
ENSCSAG00000003729PRDM59597.359ENSPTIG00000010807PRDM59597.359Panthera_tigris_altaica
ENSCSAG00000003729PRDM510099.684ENSPTRG00000016403PRDM510099.333Pan_troglodytes
ENSCSAG00000003729PRDM510099.833ENSPANG00000023612PRDM510099.833Papio_anubis
ENSCSAG00000003729PRDM59453.442ENSPKIG00000015492prdm59951.792Paramormyrops_kingsleyae
ENSCSAG00000003729PRDM510081.043ENSPSIG00000013505PRDM510081.201Pelodiscus_sinensis
ENSCSAG00000003729PRDM510078.333ENSPMGG00000012622prdm510078.333Periophthalmus_magnuspinnatus
ENSCSAG00000003729PRDM57168.689ENSPMAG00000005248prdm510068.689Petromyzon_marinus
ENSCSAG00000003729PRDM59877.005ENSPFOG00000018630prdm59977.807Poecilia_formosa
ENSCSAG00000003729PRDM510077.460ENSPLAG00000014148prdm510078.413Poecilia_latipinna
ENSCSAG00000003729PRDM510081.500ENSPMEG00000018002prdm510082.500Poecilia_mexicana
ENSCSAG00000003729PRDM510081.500ENSPREG00000018366prdm510082.500Poecilia_reticulata
ENSCSAG00000003729PRDM510094.603ENSPPYG00000015031PRDM510094.603Pongo_abelii
ENSCSAG00000003729PRDM59585.810ENSPCAG00000011671PRDM510085.810Procavia_capensis
ENSCSAG00000003729PRDM510098.734ENSPCOG00000022828PRDM510098.667Propithecus_coquereli
ENSCSAG00000003729PRDM59584.641ENSPVAG00000012309PRDM510084.641Pteropus_vampyrus
ENSCSAG00000003729PRDM510081.167ENSPNYG00000012194prdm510082.167Pundamilia_nyererei
ENSCSAG00000003729PRDM59272.991ENSPNAG00000023191-9973.162Pygocentrus_nattereri
ENSCSAG00000003729PRDM59982.383ENSPNAG00000026181prdm59982.383Pygocentrus_nattereri
ENSCSAG00000003729PRDM59990.844ENSRNOG00000023679Prdm59990.844Rattus_norvegicus
ENSCSAG00000003729PRDM510099.684ENSRBIG00000041307PRDM510099.333Rhinopithecus_bieti
ENSCSAG00000003729PRDM59487.850ENSRROG00000035343PRDM510088.732Rhinopithecus_roxellana
ENSCSAG00000003729PRDM510099.367ENSSBOG00000022100PRDM510099.333Saimiri_boliviensis_boliviensis
ENSCSAG00000003729PRDM59075.615ENSSHAG00000003250PRDM510076.230Sarcophilus_harrisii
ENSCSAG00000003729PRDM510075.935ENSSFOG00015020478prdm510075.447Scleropages_formosus
ENSCSAG00000003729PRDM510081.667ENSSMAG00000018844prdm510081.667Scophthalmus_maximus
ENSCSAG00000003729PRDM510081.333ENSSDUG00000020397prdm510082.167Seriola_dumerili
ENSCSAG00000003729PRDM510081.333ENSSLDG00000013353prdm510082.167Seriola_lalandi_dorsalis
ENSCSAG00000003729PRDM59397.436ENSSARG00000014129-6897.436Sorex_araneus
ENSCSAG00000003729PRDM510089.557ENSSPUG00000009941PRDM510088.667Sphenodon_punctatus
ENSCSAG00000003729PRDM510077.021ENSSPAG00000013866prdm510077.813Stegastes_partitus
ENSCSAG00000003729PRDM510097.496ENSSSCG00000009101PRDM510097.496Sus_scrofa
ENSCSAG00000003729PRDM59581.135ENSTGUG00000001920PRDM510081.135Taeniopygia_guttata
ENSCSAG00000003729PRDM510080.833ENSTRUG00000013850prdm510081.000Takifugu_rubripes
ENSCSAG00000003729PRDM510066.223ENSTNIG00000005901prdm510066.223Tetraodon_nigroviridis
ENSCSAG00000003729PRDM59585.479ENSTBEG00000015386PRDM58685.753Tupaia_belangeri
ENSCSAG00000003729PRDM510091.587ENSTTRG00000010996PRDM510091.587Tursiops_truncatus
ENSCSAG00000003729PRDM59397.436ENSUAMG00000009994PRDM58495.679Ursus_americanus
ENSCSAG00000003729PRDM59599.367ENSUMAG00000003733PRDM59997.183Ursus_maritimus
ENSCSAG00000003729PRDM59782.843ENSVPAG00000007435PRDM510082.843Vicugna_pacos
ENSCSAG00000003729PRDM59392.504ENSVVUG00000013192PRDM510092.504Vulpes_vulpes
ENSCSAG00000003729PRDM510076.228ENSXETG00000002101prdm510076.228Xenopus_tropicalis
ENSCSAG00000003729PRDM510082.000ENSXCOG00000008567prdm510082.167Xiphophorus_couchianus
ENSCSAG00000003729PRDM510082.000ENSXMAG00000013825prdm510082.167Xiphophorus_maculatus

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