EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSAG00000003922 (Gene tree)
Gene ID: 103236112
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Plus strand
Length: 8344 bases
Position: chr7:57713881-57722224
Accession: 14264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000000287	Gar1	PF04410.14	4.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000001953	GAR1-201	2140	-	ENSCSAP00000000287	198 (aa)	-	A0A0D9QV98

Gene Model

Click here to download ENSCSAG00000003922's gene model file

Pathways

Pathway ID	Pathway Name	Source
csab03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000003922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000003922	GAR1	98	97.949	ENSG00000109534	GAR1	90	97.949	Homo_sapiens
ENSCSAG00000003922	GAR1	54	94.393	ENSAPOG00000019754	gar1	50	92.523	Acanthochromis_polyacanthus
ENSCSAG00000003922	GAR1	55	98.165	ENSAMEG00000004605	GAR1	52	98.131	Ailuropoda_melanoleuca
ENSCSAG00000003922	GAR1	54	94.393	ENSAOCG00000020947	gar1	50	92.523	Amphiprion_ocellaris
ENSCSAG00000003922	GAR1	54	94.393	ENSAPEG00000001676	gar1	50	92.523	Amphiprion_percula
ENSCSAG00000003922	GAR1	54	94.393	ENSATEG00000003733	gar1	50	92.523	Anabas_testudineus
ENSCSAG00000003922	GAR1	54	89.623	ENSAPLG00000010926	GAR1	58	89.524	Anas_platyrhynchos
ENSCSAG00000003922	GAR1	98	97.436	ENSANAG00000021608	GAR1	89	97.436	Aotus_nancymaae
ENSCSAG00000003922	GAR1	55	99.083	ENSBTAG00000000748	GAR1	51	99.065	Bos_taurus
ENSCSAG00000003922	GAR1	98	96.923	ENSCJAG00000004041	GAR1	89	96.923	Callithrix_jacchus
ENSCSAG00000003922	GAR1	54	99.057	ENSCAFG00020015566	GAR1	56	99.065	Canis_lupus_dingo
ENSCSAG00000003922	GAR1	56	99.091	ENSCHIG00000016026	-	51	99.065	Capra_hircus
ENSCSAG00000003922	GAR1	55	100.000	ENSTSYG00000013668	-	50	100.000	Carlito_syrichta
ENSCSAG00000003922	GAR1	55	91.743	ENSTSYG00000026632	-	55	91.589	Carlito_syrichta
ENSCSAG00000003922	GAR1	98	97.436	ENSCCAG00000029372	GAR1	89	97.436	Cebus_capucinus
ENSCSAG00000003922	GAR1	100	100.000	ENSCATG00000021854	GAR1	100	100.000	Cercocebus_atys
ENSCSAG00000003922	GAR1	61	97.521	ENSCLAG00000005335	GAR1	96	96.104	Chinchilla_lanigera
ENSCSAG00000003922	GAR1	54	92.453	ENSCPBG00000004310	GAR1	54	91.589	Chrysemys_picta_bellii
ENSCSAG00000003922	GAR1	98	97.436	ENSCANG00000039262	GAR1	90	97.436	Colobus_angolensis_palliatus
ENSCSAG00000003922	GAR1	54	94.393	ENSCVAG00000002103	gar1	51	92.523	Cyprinodon_variegatus
ENSCSAG00000003922	GAR1	55	99.083	ENSDNOG00000037632	GAR1	54	99.065	Dasypus_novemcinctus
ENSCSAG00000003922	GAR1	87	53.947	FBgn0011824	CG4038	76	56.552	Drosophila_melanogaster
ENSCSAG00000003922	GAR1	56	98.182	ENSEASG00005004658	GAR1	50	98.131	Equus_asinus_asinus
ENSCSAG00000003922	GAR1	56	99.091	ENSECAG00000013624	GAR1	54	99.065	Equus_caballus
ENSCSAG00000003922	GAR1	55	99.083	ENSFCAG00000040791	-	51	99.065	Felis_catus
ENSCSAG00000003922	GAR1	87	53.333	ENSFCAG00000025841	-	78	53.901	Felis_catus
ENSCSAG00000003922	GAR1	54	93.396	ENSFALG00000006445	GAR1	66	79.861	Ficedula_albicollis
ENSCSAG00000003922	GAR1	56	91.892	ENSFHEG00000008068	gar1	50	91.589	Fundulus_heteroclitus
ENSCSAG00000003922	GAR1	53	93.269	ENSGAGG00000004393	GAR1	55	91.589	Gopherus_agassizii
ENSCSAG00000003922	GAR1	56	80.180	ENSGGOG00000036205	-	53	80.189	Gorilla_gorilla
ENSCSAG00000003922	GAR1	98	97.436	ENSGGOG00000008681	GAR1	90	97.436	Gorilla_gorilla
ENSCSAG00000003922	GAR1	54	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSCSAG00000003922	GAR1	56	90.000	ENSIPUG00000003194	gar1	51	89.720	Ictalurus_punctatus
ENSCSAG00000003922	GAR1	55	97.248	ENSSTOG00000005577	GAR1	68	96.154	Ictidomys_tridecemlineatus
ENSCSAG00000003922	GAR1	56	89.189	ENSKMAG00000010402	gar1	51	89.720	Kryptolebias_marmoratus
ENSCSAG00000003922	GAR1	54	87.736	ENSLACG00000003306	GAR1	63	87.619	Latimeria_chalumnae
ENSCSAG00000003922	GAR1	98	98.462	ENSMFAG00000024592	GAR1	90	98.462	Macaca_fascicularis
ENSCSAG00000003922	GAR1	55	84.259	ENSMFAG00000003572	-	52	82.243	Macaca_fascicularis
ENSCSAG00000003922	GAR1	98	98.462	ENSMMUG00000021225	GAR1	90	98.462	Macaca_mulatta
ENSCSAG00000003922	GAR1	98	98.462	ENSMNEG00000042594	GAR1	90	98.462	Macaca_nemestrina
ENSCSAG00000003922	GAR1	98	97.949	ENSMLEG00000002496	GAR1	89	97.949	Mandrillus_leucophaeus
ENSCSAG00000003922	GAR1	55	96.330	ENSMAUG00000016788	Gar1	66	98.077	Mesocricetus_auratus
ENSCSAG00000003922	GAR1	55	95.413	ENSMOCG00000001340	Gar1	66	100.000	Microtus_ochrogaster
ENSCSAG00000003922	GAR1	54	95.327	ENSMMOG00000004156	gar1	51	95.192	Mola_mola
ENSCSAG00000003922	GAR1	55	96.330	MGP_CAROLIEiJ_G0025627	Gar1	66	100.000	Mus_caroli
ENSCSAG00000003922	GAR1	56	96.364	ENSMUSG00000028010	Gar1	89	85.795	Mus_musculus
ENSCSAG00000003922	GAR1	56	98.182	MGP_PahariEiJ_G0027076	Gar1	66	100.000	Mus_pahari
ENSCSAG00000003922	GAR1	56	96.364	MGP_SPRETEiJ_G0026580	Gar1	89	85.795	Mus_spretus
ENSCSAG00000003922	GAR1	55	99.083	ENSMPUG00000008615	GAR1	51	99.065	Mustela_putorius_furo
ENSCSAG00000003922	GAR1	56	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSCSAG00000003922	GAR1	56	83.784	ENSNLEG00000034282	-	54	83.178	Nomascus_leucogenys
ENSCSAG00000003922	GAR1	98	96.923	ENSNLEG00000016578	GAR1	90	96.923	Nomascus_leucogenys
ENSCSAG00000003922	GAR1	54	98.131	ENSODEG00000011083	GAR1	55	97.196	Octodon_degus
ENSCSAG00000003922	GAR1	55	99.083	ENSOCUG00000003901	GAR1	50	99.065	Oryctolagus_cuniculus
ENSCSAG00000003922	GAR1	55	99.083	ENSOGAG00000004693	GAR1	50	99.065	Otolemur_garnettii
ENSCSAG00000003922	GAR1	55	99.083	ENSOARG00000004910	GAR1	51	99.065	Ovis_aries
ENSCSAG00000003922	GAR1	100	98.995	ENSPPAG00000014081	GAR1	100	98.995	Pan_paniscus
ENSCSAG00000003922	GAR1	55	99.083	ENSPPRG00000023697	GAR1	51	99.065	Panthera_pardus
ENSCSAG00000003922	GAR1	55	99.083	ENSPTIG00000021565	GAR1	51	99.065	Panthera_tigris_altaica
ENSCSAG00000003922	GAR1	100	98.990	ENSPTRG00000016364	GAR1	100	98.990	Pan_troglodytes
ENSCSAG00000003922	GAR1	98	97.436	ENSPANG00000000639	GAR1	90	97.436	Papio_anubis
ENSCSAG00000003922	GAR1	55	96.330	ENSPEMG00000015838	Gar1	66	98.077	Peromyscus_maniculatus_bairdii
ENSCSAG00000003922	GAR1	54	93.458	ENSPFOG00000024155	gar1	51	91.589	Poecilia_formosa
ENSCSAG00000003922	GAR1	54	93.458	ENSPLAG00000015056	gar1	51	91.589	Poecilia_latipinna
ENSCSAG00000003922	GAR1	54	94.393	ENSPMEG00000009320	gar1	51	92.523	Poecilia_mexicana
ENSCSAG00000003922	GAR1	98	97.436	ENSPPYG00000014996	GAR1	90	97.436	Pongo_abelii
ENSCSAG00000003922	GAR1	54	100.000	ENSPCOG00000027049	GAR1	55	100.000	Propithecus_coquereli
ENSCSAG00000003922	GAR1	85	95.906	ENSRNOG00000061146	Gar1	100	95.906	Rattus_norvegicus
ENSCSAG00000003922	GAR1	100	99.495	ENSRBIG00000019547	GAR1	100	99.495	Rhinopithecus_bieti
ENSCSAG00000003922	GAR1	57	82.143	ENSRBIG00000042411	-	52	81.308	Rhinopithecus_bieti
ENSCSAG00000003922	GAR1	57	82.143	ENSRROG00000044348	-	51	81.308	Rhinopithecus_roxellana
ENSCSAG00000003922	GAR1	100	100.000	ENSRROG00000028454	GAR1	100	100.000	Rhinopithecus_roxellana
ENSCSAG00000003922	GAR1	61	52.846	YHR089C	-	78	48.092	Saccharomyces_cerevisiae
ENSCSAG00000003922	GAR1	97	96.410	ENSSBOG00000024785	GAR1	90	96.410	Saimiri_boliviensis_boliviensis
ENSCSAG00000003922	GAR1	54	93.458	ENSSLDG00000023264	gar1	50	91.589	Seriola_lalandi_dorsalis
ENSCSAG00000003922	GAR1	54	93.396	ENSSPUG00000008707	GAR1	60	91.589	Sphenodon_punctatus
ENSCSAG00000003922	GAR1	56	99.091	ENSSSCG00000009137	GAR1	53	99.065	Sus_scrofa
ENSCSAG00000003922	GAR1	50	89.899	ENSTGUG00000004185	GAR1	65	90.625	Taeniopygia_guttata
ENSCSAG00000003922	GAR1	54	90.654	ENSTRUG00000020580	gar1	51	88.785	Takifugu_rubripes
ENSCSAG00000003922	GAR1	53	93.269	ENSTNIG00000013023	gar1	61	91.589	Tetraodon_nigroviridis
ENSCSAG00000003922	GAR1	54	99.057	ENSUAMG00000005652	GAR1	56	99.065	Ursus_americanus
ENSCSAG00000003922	GAR1	55	99.083	ENSUMAG00000000776	GAR1	52	99.065	Ursus_maritimus
ENSCSAG00000003922	GAR1	55	99.083	ENSVVUG00000017612	GAR1	55	99.065	Vulpes_vulpes