EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAG00000004770 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chlorocebus_sabaeus
Status: putative
Strand: Minus strand
Length: 962 bases
Position: chr7:22418347-22419308
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAP00000001097	RRM_1	PF00076.22	2.2e-32	1	2
ENSCSAP00000001097	RRM_1	PF00076.22	2.2e-32	2	2
ENSCSAP00000001097	HnRNPA1	PF11627.8	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAT00000002802	-	804	-	ENSCSAP00000001097	267 (aa)	-	A0A0D9QXK8

Gene Model

Click here to download ENSCSAG00000004770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAG00000004770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAG00000004770	-	69	75.956	ENSCSAG00000014399	-	89	70.044
ENSCSAG00000004770	-	87	75.661	ENSCSAG00000000148	-	95	70.000
ENSCSAG00000004770	-	91	31.801	ENSCSAG00000000785	-	50	32.727
ENSCSAG00000004770	-	69	74.863	ENSCSAG00000006389	-	67	69.507
ENSCSAG00000004770	-	69	39.779	ENSCSAG00000004463	HNRNPD	62	37.281
ENSCSAG00000004770	-	93	64.238	ENSCSAG00000019724	-	94	64.570
ENSCSAG00000004770	-	67	37.222	ENSCSAG00000005633	MSI2	54	37.222
ENSCSAG00000004770	-	69	52.973	ENSCSAG00000011517	-	55	51.351
ENSCSAG00000004770	-	66	37.209	ENSCSAG00000012245	CIRBP	55	37.209
ENSCSAG00000004770	-	73	66.495	ENSCSAG00000014175	HNRNPA2B1	88	62.232
ENSCSAG00000004770	-	93	62.914	ENSCSAG00000018870	-	94	64.901
ENSCSAG00000004770	-	93	65.116	ENSCSAG00000018616	-	94	68.106
ENSCSAG00000004770	-	87	85.714	ENSCSAG00000005436	-	95	76.305
ENSCSAG00000004770	-	72	64.583	ENSCSAG00000005140	-	97	52.083
ENSCSAG00000004770	-	69	50.562	ENSCSAG00000000499	HNRNPA0	91	44.061
ENSCSAG00000004770	-	71	38.421	ENSCSAG00000002265	MSI1	64	38.421
ENSCSAG00000004770	-	64	36.471	ENSCSAG00000002626	-	74	35.922
ENSCSAG00000004770	-	91	31.801	ENSCSAG00000019136	-	50	32.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAG00000004770	-	93	50.831	ENSCAFG00000030783	-	94	54.485	Canis_familiaris
ENSCSAG00000004770	-	90	51.246	ENSCAFG00000017424	-	100	51.246	Canis_familiaris
ENSCSAG00000004770	-	93	50.166	ENSCAFG00000031044	-	94	50.831	Canis_familiaris
ENSCSAG00000004770	-	89	64.979	ENSDNOG00000036385	-	93	65.823	Dasypus_novemcinctus
ENSCSAG00000004770	-	85	67.234	ENSDNOG00000039025	-	100	67.234	Dasypus_novemcinctus
ENSCSAG00000004770	-	65	66.857	ENSDNOG00000037420	-	91	66.857	Dasypus_novemcinctus
ENSCSAG00000004770	-	92	55.918	ENSETEG00000013374	-	92	56.735	Echinops_telfairi
ENSCSAG00000004770	-	55	61.905	ENSETEG00000005266	-	86	63.077	Echinops_telfairi
ENSCSAG00000004770	-	92	66.531	ENSETEG00000007429	-	91	66.939	Echinops_telfairi
ENSCSAG00000004770	-	92	66.260	ENSETEG00000010614	-	92	66.803	Echinops_telfairi
ENSCSAG00000004770	-	84	68.354	ENSELUG00000020089	-	98	63.118	Esox_lucius
ENSCSAG00000004770	-	93	56.180	ENSFDAG00000009166	-	93	57.678	Fukomys_damarensis
ENSCSAG00000004770	-	72	68.912	ENSMPUG00000000096	-	96	61.753	Mustela_putorius_furo
ENSCSAG00000004770	-	88	75.648	ENSNLEG00000034385	-	100	68.534	Nomascus_leucogenys
ENSCSAG00000004770	-	88	78.125	ENSNLEG00000029989	-	95	62.057	Nomascus_leucogenys
ENSCSAG00000004770	-	80	100.000	ENSOCUG00000022668	-	95	66.436	Oryctolagus_cuniculus
ENSCSAG00000004770	-	99	50.877	ENSOARG00000010092	-	76	50.877	Ovis_aries
ENSCSAG00000004770	-	92	75.194	ENSPPRG00000018110	-	92	75.494	Panthera_pardus
ENSCSAG00000004770	-	93	74.510	ENSPPYG00000004746	-	70	67.308	Pongo_abelii
ENSCSAG00000004770	-	54	81.731	ENSRNOG00000050603	AABR07055875.1	93	53.668	Rattus_norvegicus
ENSCSAG00000004770	-	54	81.731	ENSRNOG00000046286	AABR07055878.1	93	53.668	Rattus_norvegicus